Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.0e-172 609.0 304 100.0
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.4e-170 602.8 302 99.7
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 8.8e-144 513.8 304 83.9
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 3.7e-142 508.4 304 81.6
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 6.3e-142 507.7 297 84.2
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 8.2e-142 507.3 304 81.6
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 8.2e-142 507.3 304 81.6
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.8e-141 506.1 304 81.9
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 2.4e-141 505.8 304 82.6
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 9.1e-141 503.8 304 80.6
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 9.1e-141 503.8 303 81.8
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.2e-140 503.4 304 80.9
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 4.5e-140 501.5 304 81.9
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 5.9e-140 501.1 304 81.9
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 7.7e-140 500.7 304 80.6
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 2.2e-139 499.2 304 79.9
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 2.9e-139 498.8 304 82.2
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 3.8e-139 498.4 304 79.9
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 1.1e-138 496.9 304 80.9
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 1.1e-138 496.9 304 79.9
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 1.9e-138 496.1 304 80.6
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 1.9e-138 496.1 304 78.3
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 1.9e-138 496.1 304 80.3
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 1.9e-138 496.1 304 79.6
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 2.5e-138 495.7 304 80.9
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 3.2e-138 495.4 302 79.5
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 4.2e-138 495.0 304 80.6
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 1.6e-137 493.0 299 80.3
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 2.7e-137 492.3 304 79.9
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 5.1e-136 488.0 304 79.6
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 5.1e-136 488.0 304 79.6
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 6.7e-136 487.6 304 79.6
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 1.1e-135 486.9 304 79.6
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 2.6e-135 485.7 304 79.9
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 4.4e-135 485.0 304 78.0
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 2.2e-134 482.6 304 78.0
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 3.7e-134 481.9 304 80.3
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 4.8e-134 481.5 300 79.7
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 8.2e-134 480.7 304 79.3
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 8.2e-134 480.7 304 77.3
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 8.2e-134 480.7 304 78.3
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 1.1e-133 480.3 304 77.6
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 1.4e-133 479.9 300 79.7
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 2.4e-133 479.2 283 85.9
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 2.4e-133 479.2 304 77.6
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 2.4e-133 479.2 304 78.6
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 9.1e-133 477.2 304 77.0
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 9.1e-133 477.2 304 77.6
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 1.2e-132 476.9 304 79.3
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 2.6e-132 475.7 304 78.0
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 4.5e-132 474.9 304 77.6
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 4.5e-132 474.9 304 78.3
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.3e-131 473.4 304 77.3
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 5.0e-131 471.5 304 77.3
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 8.5e-131 470.7 304 76.6
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 1.9e-130 469.5 304 76.3
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 4.2e-130 468.4 304 76.0
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 7.2e-130 467.6 304 76.3
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 9.4e-130 467.2 304 76.6
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 1.2e-129 466.8 304 76.6
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 2.1e-129 466.1 304 75.7
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 2.1e-129 466.1 304 75.7
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 8.0e-129 464.2 304 76.3
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.0e-128 463.8 262 88.9
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 1.4e-128 463.4 304 75.0
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 8.8e-128 460.7 304 74.3
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 1.7e-126 456.4 284 81.3
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 2.2e-126 456.1 300 74.7
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 2.8e-126 455.7 305 76.4
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 3.7e-126 455.3 306 73.5
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 8.2e-126 454.1 300 73.3
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 1.4e-125 453.4 306 72.2
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 1.4e-125 453.4 306 72.2
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 1.8e-125 453.0 306 72.2
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 3.1e-125 452.2 306 71.9
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 7.0e-125 451.1 300 74.7
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 2.6e-124 449.1 306 71.2
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 3.5e-124 448.7 306 70.9
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 3.8e-123 445.3 303 72.3
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 1.1e-122 443.7 306 72.2
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 4.2e-122 441.8 306 72.5
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 1.2e-121 440.3 303 71.9
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 3.6e-121 438.7 306 71.9
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 6.1e-121 438.0 300 72.7
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 6.3e-118 427.9 301 70.1
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 1.1e-117 427.2 291 74.6
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 2.9e-115 419.1 246 86.2
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 4.2e-114 415.2 307 68.1
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 1.2e-113 413.7 304 68.4
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 2.8e-110 402.5 286 70.6
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.6e-108 396.7 304 65.8
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 4.5e-108 395.2 266 74.8
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 3.2e-101 372.5 242 75.2
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 6.6e-99 364.8 305 60.0
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.4e-96 357.1 196 91.8
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 5.2e-96 355.1 295 64.7
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 1.4e-93 347.1 230 75.2
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 2.4e-93 346.3 271 65.7
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 8.6e-91 337.8 292 58.9
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 3.6e-89 332.4 262 65.6
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 3.4e-87 325.9 299 55.9
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 8.3e-86 321.2 220 72.7
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 3.2e-85 319.3 304 54.3
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 1.6e-76 290.4 297 50.8
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 3.9e-75 285.8 298 53.7
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 3.3e-74 282.7 202 69.8
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 9.6e-66 254.6 310 45.2
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.1e-64 249.6 143 90.2
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.9e-64 248.4 144 90.3
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.3e-62 244.2 215 60.5
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.4e-62 241.9 144 87.5
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 1.2e-55 221.1 303 45.9
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.4e-55 219.5 144 82.6
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 3.7e-49 199.5 321 38.9
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 1.6e-44 184.1 164 51.8
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.6e-41 174.1 91 91.2
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 9.0e-40 168.3 123 67.5
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 2.6e-39 166.8 369 32.0
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 3.5e-36 156.4 317 33.4
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 1.6e-33 147.5 263 39.9
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 5.1e-27 125.9 80 77.5
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.5e-26 124.4 333 29.4
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.5e-13 81.3 43 88.4


User provided reference genes

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