Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029656 Camellia sinensis var. sinensis HOM05D004555 ORTHO05D005305 9.6e-130 466.8 237 100.0
Actinidia29808 Actinidia chinensis HOM05D004555 ORTHO05D005305 1.8e-104 382.9 232 82.8
Rhsim07G0242300 Rhododendron simsii HOM05D004555 ORTHO05D005305 4.2e-101 371.7 230 80.9
Rhsim07G0242900 Rhododendron simsii HOM05D004555 ORTHO05D005305 1.6e-100 369.8 230 80.4
Dinv39456 Davidia involucrata HOM05D004555 ORTHO05D005305 2.8e-97 359.0 224 81.2
QL02p009638 Quercus lobata HOM05D004555 ORTHO05D005305 2.2e-94 349.4 224 79.0
QL02p009656 Quercus lobata HOM05D004555 ORTHO05D005305 5.5e-93 344.7 224 78.1
GSVIVG01009773001 Vitis vinifera HOM05D004555 ORTHO05D005305 7.2e-93 344.4 225 76.9
QL02p009623 Quercus lobata HOM05D004555 ORTHO05D005305 2.1e-92 342.8 224 77.7
MSTRG.1250 Avicennia marina HOM05D004555 ORTHO05D005305 4.6e-92 341.7 227 73.6
Aqoxy5G01553 Aquilegia oxysepala HOM05D004555 ORTHO05D005305 1.4e-91 340.1 220 76.8
CiPaw.07G156800 Carya illinoinensis HOM05D004555 ORTHO05D005305 1.8e-91 339.7 226 74.8
Sc02g0005680 Simmondsia chinensis HOM05D004555 ORTHO05D005305 3.0e-91 339.0 227 72.7
PGSC0003DMG400003702 Solanum tuberosum HOM05D004555 ORTHO05D005305 1.1e-90 337.0 224 72.8
Solyc04g080750.4 Solanum lycopersicum HOM05D004555 ORTHO05D005305 2.0e-90 336.3 224 72.8
Migut.C00768 Erythranthe guttata HOM05D004555 ORTHO05D005305 2.5e-90 335.9 222 73.0
Actinidia29807 Actinidia chinensis HOM05D004555 ORTHO05D005305 3.3e-90 335.5 239 72.4
Lalb_Chr22g0354561 Lupinus albus HOM05D004555 ORTHO05D005305 4.3e-90 335.1 237 68.8
Nn1g05806 Nelumbo nucifera HOM05D004555 ORTHO05D005305 5.7e-90 334.7 226 74.8
SGA_v2.0_scaffold201G41359 Striga asiatica HOM05D004555 ORTHO05D005305 7.4e-90 334.3 220 74.5
Glyma.14G071100 Glycine max HOM05D004555 ORTHO05D005305 1.3e-89 333.6 224 73.7
Solyc12g089230.2 Solanum lycopersicum HOM05D000012 ORTHO05D000567 1.7e-89 333.2 227 70.5
Sopen12g031110 Solanum pennellii HOM05D004555 ORTHO05D005305 4.8e-89 331.6 230 69.6
Prupe.1G374200 Prunus persica HOM05D004555 ORTHO05D005305 6.3e-89 331.3 226 71.7
CAN.G847.6 Capsicum annuum HOM05D004555 ORTHO05D005305 1.1e-88 330.5 226 72.6
MD08G1024400 Malus domestica HOM05D004555 ORTHO05D005305 1.1e-88 330.5 222 73.0
Ciclev10002388m.g Citrus clementina HOM05D004555 ORTHO05D005305 1.4e-88 330.1 224 71.9
HanXRQChr09g0269571 Helianthus annuus HOM05D004555 ORTHO05D005305 1.4e-88 330.1 217 75.1
Cfa013876 Carpinus fangiana HOM05D004555 ORTHO05D005305 4.1e-88 328.6 221 75.6
Glyma.17G253500 Glycine max HOM05D004555 ORTHO05D005305 4.1e-88 328.6 224 71.9
HanXRQChr16g0501461 Helianthus annuus HOM05D004555 ORTHO05D005305 5.3e-88 328.2 225 73.8
Lj5g0004312 Lotus japonicus HOM05D004555 ORTHO05D005305 2.0e-87 326.2 222 71.2
PGSC0003DMG400015428 Solanum tuberosum HOM05D004555 ORTHO05D005305 2.0e-87 326.2 230 68.7
CANSAT25G0954 Cannabis sativa HOM05D004555 ORTHO05D005305 3.4e-87 325.5 226 70.4
Eucgr.F01860 Eucalyptus grandis HOM05D004555 ORTHO05D005305 3.4e-87 325.5 226 72.1
Atru.chr13.408 Acer truncatum HOM05D004555 ORTHO05D005305 1.0e-86 323.9 224 70.1
DCAR_022455 Daucus carota HOM05D004555 ORTHO05D005305 1.0e-86 323.9 224 71.4
Thecc.08G033700 Theobroma cacao HOM05D004555 ORTHO05D005305 1.3e-86 323.6 220 74.1
Lsat_1_v5_gn_4_117401 Lactuca sativa HOM05D004555 ORTHO05D005305 1.7e-86 323.2 225 71.1
Atru.chr13.407 Acer truncatum HOM05D004555 ORTHO05D005305 2.2e-86 322.8 225 71.6
MBI16_g23832_MAGBIO Magnolia biondii HOM05D004555 ORTHO05D005305 5.0e-86 321.6 226 71.7
Lj4P789T31 Lonicera japonica HOM05D004555 ORTHO05D005305 8.5e-86 320.9 215 72.6
Peaxi162Scf00189g00812 Petunia axillaris HOM05D004555 ORTHO05D005305 8.5e-86 320.9 224 67.0
FvH4_2g39310 Fragaria vesca HOM05D004555 ORTHO05D005305 1.1e-85 320.5 227 71.4
ClCG08G014730 Citrullus lanatus HOM05D004555 ORTHO05D005305 1.9e-85 319.7 220 71.4
Thecc.08G033500 Theobroma cacao HOM05D004555 ORTHO05D005305 1.9e-85 319.7 237 70.0
QL02p009603 Quercus lobata HOM05D004555 ORTHO05D005305 7.2e-85 317.8 223 72.2
EL10Ac1g00613 Beta vulgaris HOM05D004555 ORTHO05D005305 9.4e-85 317.4 228 71.1
FAN15G3036 Fragaria x ananassa HOM05D004555 ORTHO05D005305 9.4e-85 317.4 227 70.5
FAN26G3263 Fragaria x ananassa HOM05D004555 ORTHO05D005305 9.4e-85 317.4 227 70.5
arahy.Tifrunner.gnm1.ann1.MX0J1Q Arachis hypogaea HOM05D004555 ORTHO05D005305 1.2e-84 317.0 220 70.9
Duzib093G2146 Durio zibethinus HOM05D004555 ORTHO05D005305 2.1e-84 316.2 220 70.9
Sed0025869 Sechium edule HOM05D004555 ORTHO05D005305 2.7e-84 315.8 220 70.5
CsaV3_2G029030 Cucumis sativus L. HOM05D004555 ORTHO05D005305 3.6e-84 315.5 222 70.3
Medtr1g022950 Medicago truncatula HOM05D004555 ORTHO05D005305 3.6e-84 315.5 222 69.4
Sabra02G0025300 Salix brachista HOM05D004555 ORTHO05D005305 3.6e-84 315.5 230 67.8
FAN27G1022 Fragaria x ananassa HOM05D004555 ORTHO05D005305 4.7e-84 315.1 227 70.0
Potri.005G231600 Populus trichocarpa HOM05D004555 ORTHO05D005305 4.7e-84 315.1 231 67.5
Cfa013877 Carpinus fangiana HOM05D004555 ORTHO05D005305 6.1e-84 314.7 221 71.9
PSO724G1102 Papaver somniferum HOM05D004555 ORTHO05D005305 7.9e-84 314.3 221 71.5
RcHm_v2.0_Chr6g0301691 Rosa chinensis HOM05D004555 ORTHO05D005305 7.9e-84 314.3 232 67.7
Gohir.D05G194000 Gossypium hirsutum HOM05D004555 ORTHO05D005305 1.4e-83 313.5 220 71.8
Gorai.009G199000 Gossypium raimondii HOM05D004555 ORTHO05D005305 1.4e-83 313.5 220 71.8
arahy.Tifrunner.gnm1.ann1.LAIT0P Arachis hypogaea HOM05D004555 ORTHO05D005305 3.0e-83 312.4 221 70.6
vmacro04301 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 5.1e-83 311.6 207 75.4
vmacro22853 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 5.1e-83 311.6 207 75.4
Gohir.A05G190600 Gossypium hirsutum HOM05D004555 ORTHO05D005305 1.1e-82 310.5 220 70.9
TPR.G30491 Trifolium pratense HOM05D004555 ORTHO05D005305 1.5e-82 310.1 220 66.8
Phvul.001G011500 Phaseolus vulgaris HOM05D004555 ORTHO05D005305 2.0e-82 309.7 220 69.1
THA.LOC104812564 Tarenaya hassleriana HOM05D004555 ORTHO05D005305 3.3e-82 308.9 225 66.2
ECA232G1060 Erigeron canadensis HOM05D004555 ORTHO05D005305 4.4e-82 308.5 199 75.4
COL.COLO4_26241 Corchorus olitorius HOM05D004555 ORTHO05D005305 1.3e-81 307.0 230 68.7
Peaxi162Scf00064g00530 Petunia axillaris HOM05D000012 ORTHO05D000567 1.3e-81 307.0 220 70.0
VMungo0647G2091 Vigna mungo HOM05D004555 ORTHO05D005305 1.3e-81 307.0 218 67.9
Carub.0001s3280 Capsella rubella HOM05D004555 ORTHO05D005305 6.3e-81 304.7 221 66.1
THA.LOC104814152 Tarenaya hassleriana HOM05D004555 ORTHO05D005305 2.4e-80 302.8 230 64.8
TWI56G1140 Tripterygium wilfordii HOM05D004555 ORTHO05D005305 2.4e-80 302.8 255 61.6
AL1G49880 Arabidopsis lyrata HOM05D004555 ORTHO05D005305 5.3e-80 301.6 221 65.6
AT1G35180 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 9.1e-80 300.8 221 65.6
PSO729G0189 Papaver somniferum HOM05D004555 ORTHO05D005305 1.2e-79 300.4 247 64.0
CANSAT25G2211 Cannabis sativa HOM05D004555 ORTHO05D005305 2.0e-79 299.7 222 65.8
Sp1g29900 Schrenkiella parvula HOM05D004555 ORTHO05D005305 3.5e-79 298.9 221 65.2
Thhalv10001837m.g Eutrema salsugineum HOM05D004555 ORTHO05D005305 4.5e-79 298.5 221 65.2
Hund17186 Selenicereus undatus HOM05D004555 ORTHO05D005305 4.5e-79 298.5 222 66.7
Oeu030598.1 Olea europaea HOM05D004555 ORTHO05D005305 3.2e-77 292.4 228 69.3
Hund17243 Selenicereus undatus HOM05D004555 ORTHO05D005305 4.2e-77 292.0 222 63.5
A05p23860 Brassica napus HOM05D004555 ORTHO05D005305 5.5e-77 291.6 221 63.3
BraA05t21262Z Brassica rapa HOM05D004555 ORTHO05D005305 5.5e-77 291.6 221 63.3
SalBow7G0356 Salvia bowleyana HOM05D004555 ORTHO05D005305 5.5e-77 291.6 281 57.7
CARHR288350 Cardamine hirsuta HOM05D004555 ORTHO05D005305 1.6e-76 290.0 221 62.9
BcaB03g13672 Brassica carinata HOM05D004555 ORTHO05D005305 4.7e-76 288.5 221 62.0
BcaC05g27748 Brassica carinata HOM05D004555 ORTHO05D005305 4.7e-76 288.5 221 62.4
C05p37330 Brassica napus HOM05D004555 ORTHO05D005305 4.7e-76 288.5 221 62.4
Nitab4.5_0007928g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 8.0e-76 287.7 250 60.8
BolC5t32477H Brassica oleracea HOM05D004555 ORTHO05D005305 1.4e-75 287.0 221 62.9
Duzib116G0274 Durio zibethinus HOM05D004555 ORTHO05D005305 1.4e-75 287.0 202 71.3
Psat6g009720 Pisum sativum HOM05D004555 ORTHO05D005305 8.8e-75 284.3 192 71.4
unitig_26.g9839 Utricularia gibba HOM05D004555 ORTHO05D005305 8.8e-75 284.3 217 64.5
COL.COLO4_26242 Corchorus olitorius HOM05D004555 ORTHO05D005305 2.0e-74 283.1 185 75.1
AUR62014481 Chenopodium quinoa HOM05D004555 ORTHO05D005305 4.4e-74 282.0 226 61.5
Haze_22549 Corylus avellana HOM05D004555 ORTHO05D005305 7.4e-74 281.2 196 71.4
BraA02t08192Z Brassica rapa HOM05D004555 ORTHO05D005305 9.7e-74 280.8 228 59.6
Cc10_g14070 Coffea canephora HOM05D004555 ORTHO05D005305 2.2e-73 279.6 221 63.8
Cpa.g.sc99.8 Carica papaya HOM05D004555 ORTHO05D005305 2.8e-73 279.3 230 65.7
Sp1g33840 Schrenkiella parvula HOM05D004555 ORTHO05D005305 2.8e-73 279.3 213 62.9
A02p31830 Brassica napus HOM05D004555 ORTHO05D005305 8.2e-73 277.7 228 58.8
Thhalv10011751m.g Eutrema salsugineum HOM05D004555 ORTHO05D005305 1.1e-72 277.3 217 60.4
AT1G35170 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 1.8e-72 276.6 221 61.5
AT1G45010 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 5.3e-72 275.0 212 64.2
AL1G52650 Arabidopsis lyrata HOM05D004555 ORTHO05D005305 4.5e-71 271.9 212 63.7
Manes.18G021200 Manihot esculenta HOM05D004555 ORTHO05D005305 4.5e-71 271.9 224 62.1
BcaB04g17579 Brassica carinata HOM05D004555 ORTHO05D005305 1.0e-70 270.8 221 58.8
Nitab4.5_0000577g0020 Nicotiana tabacum HOM05D004555 ORTHO05D005305 1.3e-70 270.4 220 62.3
A08p06280 Brassica napus HOM05D004555 ORTHO05D005305 1.7e-70 270.0 214 60.7
BraA08t32631Z Brassica rapa HOM05D004555 ORTHO05D005305 1.7e-70 270.0 214 60.7
Carub.0001s3550 Capsella rubella HOM05D004555 ORTHO05D005305 3.8e-70 268.9 211 63.0
BcaC07g37280 Brassica carinata HOM05D004555 ORTHO05D005305 5.0e-70 268.5 214 60.3
C08p07100 Brassica napus HOM05D004555 ORTHO05D005305 5.0e-70 268.5 214 60.3
BolC8t47554H Brassica oleracea HOM05D004555 ORTHO05D005305 5.0e-70 268.5 214 60.3
Os01g0262500 Oryza sativa ssp. japonica HOM05D004555 ORTHO05D005305 6.5e-70 268.1 209 63.2
Hma1.2p1_1194F.1_g265760 Hydrangea macrophylla HOM05D004555 ORTHO05D005305 8.5e-70 267.7 188 71.3
ATR1154G019 Amborella trichopoda HOM05D004555 ORTHO05D005305 3.6e-68 262.3 199 62.3
BcaC03g17015 Brassica carinata HOM05D004555 ORTHO05D005305 1.2e-66 257.3 233 55.8
BolC2t11011H Brassica oleracea HOM05D004555 ORTHO05D005305 1.2e-66 257.3 233 55.8
AUR62034520 Chenopodium quinoa HOM05D004555 ORTHO05D005305 1.8e-64 250.0 192 64.1
Cc10_g02450 Coffea canephora HOM05D004555 ORTHO05D005305 3.5e-63 245.7 153 77.1
Nitab4.5_0001091g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 1.3e-62 243.8 220 58.2
SEGI_11700 Sequoiadendron giganteum HOM05D004555 ORTHO05D005305 2.2e-62 243.0 204 56.9
CARHR036190 Cardamine hirsuta HOM05D004555 ORTHO05D005305 1.1e-61 240.7 188 61.2
MBI16_g23833_MAGBIO Magnolia biondii HOM05D004555 ORTHO05D005305 9.4e-61 237.7 244 55.3
Zm00001eb333330 Zea mays HOM05D004555 ORTHO05D005305 1.6e-60 236.9 207 56.0
TPR.G17924 Trifolium pratense HOM05D004555 ORTHO05D005305 6.1e-60 235.0 160 68.1
Sopen04g034340 Solanum pennellii HOM05D004555 ORTHO05D005305 8.0e-60 234.6 151 74.8
MELO3C010969.2 Cucumis melo HOM05D004555 ORTHO05D005305 4.8e-57 225.3 157 68.8
AagrBONN_evm.TU.Sc2ySwM_369.584 Anthoceros agrestis HOM05D004555 ORTHO05D005305 5.9e-55 218.4 220 49.1
Aa31LG6G8640 Aethionema arabicum HOM05D004555 ORTHO05D005305 4.2e-53 212.2 173 61.3
C02p49220 Brassica napus HOM05D004555 ORTHO05D005305 1.2e-52 210.7 215 50.2
Nitab4.5_0001861g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 1.6e-52 210.3 230 50.9
Sed0024456 Sechium edule HOM05D004555 ORTHO05D005305 6.8e-51 204.9 182 58.2
Mapoly0020s0017 Marchantia polymorpha HOM05D004555 ORTHO05D005305 1.8e-48 196.8 213 45.5
SMO259G0011 Selaginella moellendorffii HOM05D004555 ORTHO05D005305 1.2e-47 194.1 210 49.0
FAN20G2579 Fragaria x ananassa HOM05D004555 ORTHO05D005305 6.6e-46 188.3 227 50.7
SEGI_31948 Sequoiadendron giganteum HOM05D004555 ORTHO05D005305 1.1e-45 187.6 159 53.5
Lalb_Chr14g0369521 Lupinus albus HOM05D004555 ORTHO05D005305 2.9e-41 172.9 119 64.7
TPR.G29885 Trifolium pratense HOM05D004555 ORTHO05D005305 3.5e-39 166.0 119 63.9
CBR_g32335 Chara braunii HOM05D004555 ORTHO05D005305 7.8e-39 164.9 189 45.5
HanXRQChr09g0269541 Helianthus annuus HOM05D004555 ORTHO05D005305 1.9e-37 160.2 116 68.1
Nitab4.5_0007928g0040 Nicotiana tabacum HOM05D004555 ORTHO05D005305 1.4e-32 144.1 124 59.7
Haze_22557 Corylus avellana HOM05D004555 ORTHO05D005305 4.6e-31 139.0 88 77.3
Lalb_Chr14g0369531 Lupinus albus HOM05D004555 ORTHO05D005305 3.9e-30 136.0 101 68.3
Pp3c7_6700 Physcomitrium patens HOM05D004555 ORTHO05D005305 2.5e-29 133.3 147 43.5
vmacro04300 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 2.6e-26 123.2 163 46.0
vmacro22852 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 2.6e-26 123.2 163 46.0
MCO11G540 Micromonas commoda HOM05D004555 ORTHO05D005305 3.0e-22 109.8 204 32.8
Cc11_g05350 Coffea canephora HOM05D004555 ORTHO05D005305 2.1e-20 103.6 73 67.1
QL02p009653 Quercus lobata HOM05D004555 ORTHO05D005305 4.7e-20 102.4 67 79.1
PGR031G0233 Punica granatum HOM05D004555 ORTHO05D005305 4.2e-16 89.4 74 56.8
Hund17190 Selenicereus undatus HOM05D004555 ORTHO05D005305 2.1e-15 87.0 89 52.8
CARHR263530 Cardamine hirsuta HOM05D004555 ORTHO05D005305 9.6e-13 78.2 71 53.5
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 3.4e-10 69.7 47 66.0


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