Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029624 Camellia sinensis var. sinensis HOM05D001063 ORTHO05D043362 1.3e-85 319.7 160 100.0
Actinidia19025 Actinidia chinensis HOM05D001063 ORTHO05D000986 2.6e-22 109.4 82 70.7
Dinv10649 Davidia involucrata HOM05D001063 ORTHO05D000986 1.3e-21 107.1 85 67.1
Lj9A466T79 Lonicera japonica HOM05D001063 ORTHO05D000986 2.2e-21 106.3 85 65.9
Rhsim08G0152600 Rhododendron simsii HOM05D001063 ORTHO05D000986 4.2e-20 102.1 78 67.9
Actinidia19028 Actinidia chinensis HOM05D001063 ORTHO05D000986 2.1e-16 89.7 82 62.2
vmacro17565 Vaccinium macrocarpon HOM05D001063 ORTHO05D043362 3.7e-16 89.0 80 60.0
Lsat_1_v5_gn_4_109621 Lactuca sativa HOM05D001063 ORTHO05D000986 8.2e-16 87.8 76 56.6
Actinidia19032 Actinidia chinensis HOM05D001063 ORTHO05D000986 1.1e-15 87.4 84 63.1
Actinidia19029 Actinidia chinensis HOM05D001063 ORTHO05D000986 6.9e-15 84.7 82 58.5
Actinidia19026 Actinidia chinensis HOM05D001063 ORTHO05D000986 4.5e-14 82.0 68 66.2
Hma1.2p1_0060F.1_g033540 Hydrangea macrophylla HOM05D001063 ORTHO05D000986 1.7e-13 80.1 82 52.4
QL10p017525 Quercus lobata HOM05D001063 ORTHO05D000986 1.4e-12 77.0 107 44.9
TAR622G1238 Trochodendron aralioides HOM05D001063 ORTHO05D000986 4.2e-12 75.5 83 50.6
GSVIVG01007978001 Vitis vinifera HOM05D001063 ORTHO05D000986 7.1e-12 74.7 69 49.3
HanXRQChr15g0490141 Helianthus annuus HOM05D001063 ORTHO05D000986 9.3e-12 74.3 87 54.0
Nitab4.5_0001195g0060 Nicotiana tabacum HOM05D001063 ORTHO05D000986 9.3e-12 74.3 88 46.6
SalBow5G3480 Salvia bowleyana HOM05D001063 ORTHO05D000986 3.5e-11 72.4 76 53.9
Nn3g17303 Nelumbo nucifera HOM05D001063 ORTHO05D000986 6.1e-11 71.6 80 52.5
Cfa018919 Carpinus fangiana HOM05D001063 ORTHO05D000986 1.8e-10 70.1 56 60.7
Nitab4.5_0001211g0230 Nicotiana tabacum HOM05D001063 ORTHO05D000986 1.8e-10 70.1 89 42.7
RcHm_v2.0_Chr7g0181851 Rosa chinensis HOM05D001063 ORTHO05D000986 1.8e-10 70.1 90 42.2
Nitab4.5_0005900g0060 Nicotiana tabacum HOM05D001063 ORTHO05D000986 6.7e-10 68.2 89 41.6
Haze_07301 Corylus avellana HOM05D001063 ORTHO05D000986 1.1e-09 67.4 55 60.0
CAN.G479.70 Capsicum annuum HOM05D001063 ORTHO05D000986 1.5e-09 67.0 88 45.5
FAN13G1066 Fragaria x ananassa HOM05D001063 ORTHO05D000986 2.5e-09 66.2 89 42.7
CANSAT80G0572 Cannabis sativa HOM05D001063 ORTHO05D000986 3.3e-09 65.9 83 44.6
Cpa.g.sc341.1 Carica papaya HOM05D001063 ORTHO05D000986 4.3e-09 65.5 80 47.5
Nitab4.5_0001997g0150 Nicotiana tabacum HOM05D001063 ORTHO05D000986 4.3e-09 65.5 88 40.9
FAN08G3445 Fragaria x ananassa HOM05D001063 ORTHO05D000986 5.7e-09 65.1 90 42.2
Oeu047004.1 Olea europaea HOM05D001063 ORTHO05D000986 5.7e-09 65.1 55 60.0
FAN18G3421 Fragaria x ananassa HOM05D001063 ORTHO05D000986 7.4e-09 64.7 87 43.7
Prupe.5G196900 Prunus persica HOM05D001063 ORTHO05D000986 7.4e-09 64.7 91 42.9
CiPaw.11G046700 Carya illinoinensis HOM05D001063 ORTHO05D000986 2.2e-08 63.2 85 48.2
PGR083G1944 Punica granatum HOM05D001063 ORTHO05D000986 2.2e-08 63.2 65 53.8
FvH4_5g14640 Fragaria vesca HOM05D001063 ORTHO05D000986 2.8e-08 62.8 87 42.5
Cc04_g15110 Coffea canephora HOM05D001063 ORTHO05D000986 3.7e-08 62.4 88 39.8
Migut.I00203 Erythranthe guttata HOM05D001063 ORTHO05D000986 6.3e-08 61.6 84 46.4
Peaxi162Scf00106g00422 Petunia axillaris HOM05D001063 ORTHO05D000986 1.1e-07 60.8 80 42.5
MD14G1203600 Malus domestica HOM05D001063 ORTHO05D000986 1.4e-07 60.5 83 42.2
Ciclev10019479m.g Citrus clementina HOM05D001063 ORTHO05D000986 6.9e-07 58.2 95 42.1
Manes.14G080900 Manihot esculenta HOM05D001063 ORTHO05D000986 6.9e-07 58.2 82 40.2
COL.COLO4_36924 Corchorus olitorius HOM05D001063 ORTHO05D000986 1.2e-06 57.4 97 42.3
PGSC0003DMG400019505 Solanum tuberosum HOM05D001063 ORTHO05D000986 1.2e-06 57.4 90 40.0
Eucgr.B00531 Eucalyptus grandis HOM05D001063 ORTHO05D000986 1.5e-06 57.0 71 49.3
Gorai.001G072600 Gossypium raimondii HOM05D001063 ORTHO05D000986 2.0e-06 56.6 89 40.4
Gohir.A07G064300 Gossypium hirsutum HOM05D001063 ORTHO05D000986 2.6e-06 56.2 89 39.3
Nitab4.5_0007310g0010 Nicotiana tabacum HOM05D001063 ORTHO05D000986 3.4e-06 55.8 53 47.2
Duzib205G1138 Durio zibethinus HOM05D001063 ORTHO05D000986 7.7e-06 54.7 91 40.7
Gohir.D07G069100 Gossypium hirsutum HOM05D001063 ORTHO05D000986 7.7e-06 54.7 59 49.2


User provided reference genes

Program Settings