Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 4.5e-112 407.9 202 100.0
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 4.5e-112 407.9 202 100.0
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 4.5e-112 407.9 202 100.0
CSS0005216 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.2e-106 389.0 218 90.4
CSS0023015 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.5e-78 295.8 205 72.7
CSS0004305 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.2e-77 293.5 188 82.4
CSS0027932 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 8.3e-74 280.8 203 71.9
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 3.2e-33 146.0 167 42.5
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 9.3e-33 144.4 163 45.4
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.2e-32 144.1 190 39.5
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 6.0e-32 141.7 184 39.1
Rhsim02G0138000 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.7e-31 140.2 151 46.4
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 2.3e-31 139.8 166 40.4
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.8e-29 132.9 174 39.1
Rhsim01G0128900 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.5e-27 127.1 160 38.1
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.4e-27 125.9 194 39.2
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.7e-26 123.6 173 38.7
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.9e-26 122.9 213 34.3
Rhsim06G0220100 Rhododendron simsii HOM05D008549 ORTHO05D010234 4.6e-24 115.5 157 40.1
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 1.9e-22 110.2 173 38.2
Rhsim04G0116500 Rhododendron simsii HOM05D008549 ORTHO05D010234 5.6e-22 108.6 186 32.3
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 2.8e-21 106.3 191 31.4
RhsimUnG0068400 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.2e-19 100.9 172 35.5
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.6e-19 99.8 150 36.7
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 3.4e-19 99.4 195 34.9
Rhsim03G0038000 Rhododendron simsii HOM05D009565 ORTHO05D012252 6.5e-18 95.1 158 34.2
Rhsim12G0114600 Rhododendron simsii HOM05D009565 ORTHO05D012252 5.5e-17 92.0 165 32.1
Rhsim04G0111400 Rhododendron simsii HOM05D009565 ORTHO05D012252 2.7e-16 89.7 159 33.3
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 4.6e-16 89.0 129 33.3
RhsimUnG0101600 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.0e-15 86.3 194 26.8
TWI38G2136 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 5.7e-14 82.0 149 28.9
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 1.6e-13 80.5 224 29.0
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 6.2e-13 78.6 168 29.8
Rhsim06G0127000 Rhododendron simsii HOM05D009565 ORTHO05D012252 8.2e-13 78.2 168 30.4
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 1.4e-12 77.4 183 30.6
Rhsim01G0183600 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.1e-12 76.3 159 34.0
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 5.3e-12 75.5 151 31.8
CSS0007178 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 6.9e-12 75.1 150 33.3
Rhsim01G0076100 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.0e-12 74.7 65 47.7
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-11 74.3 150 30.7
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-11 74.3 150 30.7
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-11 74.3 182 29.7
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-11 74.3 150 30.7
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.5e-11 73.9 150 29.3
Rhsim11G0006000 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.5e-11 73.9 168 29.8
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.0e-11 73.6 150 30.0
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.0e-11 73.6 150 30.7
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.4e-11 72.8 182 29.7
CSS0010902 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 3.4e-11 72.8 81 45.7
CSS0038208 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.4e-11 72.8 150 29.3
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.5e-11 72.4 149 30.2
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.6e-11 71.6 182 29.1
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.0e-10 71.2 182 29.1
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.3e-10 70.9 181 29.3
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 1.3e-10 70.9 184 30.4
vmacro14701 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.3e-10 70.9 77 44.2
vmacro14771 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.3e-10 70.9 77 44.2
CSS0037204 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.2e-10 70.1 81 43.2
CSS0047616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 6.5e-10 68.6 73 43.8
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.5e-10 68.6 150 28.0
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 8.4e-10 68.2 124 33.1
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.4e-10 68.2 164 28.7
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.1e-09 67.8 165 29.1
PSO210G0630 Papaver somniferum HOM05D030578 ORTHO05D000669 1.9e-09 67.0 161 30.4
Rhsim05G0127300 Rhododendron simsii HOM05D024557 ORTHO05D010234 1.9e-09 67.0 112 33.0
CANSAT01G1847 Cannabis sativa HOM05D014621 ORTHO05D015019 3.2e-09 66.2 151 31.8
Rhsim06G0048900 Rhododendron simsii HOM05D009300 ORTHO05D010234 4.2e-09 65.9 85 44.7
Rhsim06G0049000 Rhododendron simsii HOM05D009300 ORTHO05D010234 5.5e-09 65.5 118 39.0
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.7e-08 63.2 187 26.2
Rhsim09G0079100 Rhododendron simsii HOM05D009565 ORTHO05D012252 2.7e-08 63.2 94 29.8
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 4.6e-08 62.4 165 27.3
vmacro13356 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.3e-07 60.8 90 36.7
MBI15_g15098_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.1e-07 58.9 178 29.8
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.1e-07 58.9 165 25.5
Rhsim01G0102200 Rhododendron simsii HOM05D009565 ORTHO05D012252 6.7e-07 58.5 125 30.4
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.7e-07 58.2 213 28.6
COL.COLO4_24475 Corchorus olitorius HOM05D003120 ORTHO05D003568 7.4e-06 55.1 147 29.9


User provided reference genes

Program Settings