Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029579 Camellia sinensis var. sinensis HOM05D006908 ORTHO05D008662 2.6e-112 408.7 199 100.0
CSS0010187 Camellia sinensis var. sinensis HOM05D006908 ORTHO05D008662 1.7e-100 369.4 185 97.3
Rhsim08G0222000 Rhododendron simsii HOM05D006908 ORTHO05D008662 3.2e-86 322.0 185 82.7
vmacro18903 Vaccinium macrocarpon HOM05D006908 ORTHO05D008662 3.5e-85 318.5 185 82.2
Actinidia01807 Actinidia chinensis HOM05D006908 ORTHO05D008662 4.5e-80 301.6 184 80.4
Dinv38042 Davidia involucrata HOM05D006908 ORTHO05D008662 3.5e-77 292.0 185 77.8
Hma1.2p1_0323F.1_g125120 Hydrangea macrophylla HOM05D006908 ORTHO05D008662 4.2e-70 268.5 182 69.8
QL05p023344 Quercus lobata HOM05D006908 ORTHO05D008662 1.6e-69 266.5 186 66.7
GSVIVG01017098001 Vitis vinifera HOM05D006908 ORTHO05D008662 1.0e-68 263.8 184 69.6
Atru.chr1.3281 Acer truncatum HOM05D006908 ORTHO05D008662 5.1e-68 261.5 196 63.8
CiPaw.01G238600 Carya illinoinensis HOM05D006908 ORTHO05D008662 8.7e-68 260.8 184 67.9
Lj5C59T9 Lonicera japonica HOM05D006908 ORTHO05D008662 2.4e-65 252.7 177 68.4
CAN.G438.72 Capsicum annuum HOM05D006908 ORTHO05D008662 9.1e-65 250.8 184 66.8
Oeu063957.2 Olea europaea HOM05D006908 ORTHO05D008662 2.6e-64 249.2 191 62.8
CANSAT56G3342 Cannabis sativa HOM05D006908 ORTHO05D008662 5.9e-64 248.1 184 60.9
Prupe.3G070300 Prunus persica HOM05D006908 ORTHO05D008662 5.9e-64 248.1 183 67.8
Thecc.06G089400 Theobroma cacao HOM05D006908 ORTHO05D008662 7.7e-64 247.7 195 60.0
PGSC0003DMG400005687 Solanum tuberosum HOM05D006908 ORTHO05D008662 1.0e-63 247.3 185 65.4
Haze_16403 Corylus avellana HOM05D006908 ORTHO05D008662 1.3e-63 246.9 183 65.0
MD17G1194300 Malus domestica HOM05D006908 ORTHO05D008662 1.3e-63 246.9 190 66.3
Cc04_g03340 Coffea canephora HOM05D006908 ORTHO05D008662 1.1e-62 243.8 197 60.9
Sopen03g039000 Solanum pennellii HOM05D006908 ORTHO05D008662 1.1e-62 243.8 188 63.3
Cpa.g.sc0.185 Carica papaya HOM05D006908 ORTHO05D008662 1.4e-62 243.4 184 65.2
COL.COLO4_30388 Corchorus olitorius HOM05D006908 ORTHO05D008662 1.4e-62 243.4 181 64.1
Nn8g39204 Nelumbo nucifera HOM05D006908 ORTHO05D008662 1.9e-62 243.0 201 62.7
Sabra01G0145800 Salix brachista HOM05D006908 ORTHO05D008662 1.9e-62 243.0 199 61.3
Solyc03g120130.4 Solanum lycopersicum HOM05D006908 ORTHO05D008662 3.2e-62 242.3 185 63.8
PSO782G4818 Papaver somniferum HOM05D006908 ORTHO05D008662 1.6e-61 240.0 180 63.9
TAR626G0624 Trochodendron aralioides HOM05D006908 ORTHO05D008662 1.6e-61 240.0 182 65.4
DCAR_023055 Daucus carota HOM05D006908 ORTHO05D008662 4.6e-61 238.4 186 64.0
Gohir.D09G082700 Gossypium hirsutum HOM05D006908 ORTHO05D008662 4.6e-61 238.4 197 57.4
Gorai.006G098400 Gossypium raimondii HOM05D006908 ORTHO05D008662 4.6e-61 238.4 197 57.4
Sc10g0007370 Simmondsia chinensis HOM05D006908 ORTHO05D008662 7.9e-61 237.7 181 64.6
VMungo1080G1808 Vigna mungo HOM05D006908 ORTHO05D008662 7.9e-61 237.7 189 61.9
MSTRG.11073 Avicennia marina HOM05D006908 ORTHO05D008662 1.0e-60 237.3 191 62.8
Duzib160G0703 Durio zibethinus HOM05D006908 ORTHO05D008662 1.0e-60 237.3 183 61.7
TWI75G1463 Tripterygium wilfordii HOM05D006908 ORTHO05D008662 1.8e-60 236.5 184 63.6
Lj3g0017668 Lotus japonicus HOM05D006908 ORTHO05D008662 5.1e-60 235.0 184 59.8
Glyma.15G014900 Glycine max HOM05D006908 ORTHO05D008662 8.8e-60 234.2 180 62.2
Peaxi162Scf00015g00453 Petunia axillaris HOM05D006908 ORTHO05D008662 1.5e-59 233.4 186 61.3
Nitab4.5_0002308g0060 Nicotiana tabacum HOM05D006908 ORTHO05D008662 2.0e-59 233.0 184 63.0
SalBow2G2262 Salvia bowleyana HOM05D006908 ORTHO05D008662 2.0e-59 233.0 184 62.0
Manes.11G045900 Manihot esculenta HOM05D006908 ORTHO05D008662 2.6e-59 232.6 199 58.8
Lalb_Chr22g0351301 Lupinus albus HOM05D006908 ORTHO05D008662 5.7e-59 231.5 180 60.0
FAN09G3067 Fragaria x ananassa HOM05D006908 ORTHO05D008662 1.7e-58 229.9 194 57.2
Phvul.005G170700 Phaseolus vulgaris HOM05D006908 ORTHO05D008662 2.8e-58 229.2 200 57.0
FAN05G1986 Fragaria x ananassa HOM05D006908 ORTHO05D008662 6.3e-58 228.0 183 60.7
PGR102G2040 Punica granatum HOM05D006908 ORTHO05D008662 6.3e-58 228.0 184 58.2
RcHm_v2.0_Chr2g0138011 Rosa chinensis HOM05D006908 ORTHO05D008662 6.3e-58 228.0 189 59.3
PSO063G2605 Papaver somniferum HOM05D006908 ORTHO05D008662 1.8e-57 226.5 180 61.7
FvH4_6g31280 Fragaria vesca HOM05D006908 ORTHO05D008662 9.1e-57 224.2 183 60.1
Ca_01120_v3 Cicer arietinum L. HOM05D006908 ORTHO05D008662 2.0e-56 223.0 180 58.9
ECA247G1365 Erigeron canadensis HOM05D006908 ORTHO05D008662 2.6e-56 222.6 183 62.3
ClCG07G013040 Citrullus lanatus HOM05D006908 ORTHO05D008662 1.0e-55 220.7 187 59.4
HanXRQChr02g0032801 Helianthus annuus HOM05D006908 ORTHO05D008662 1.0e-55 220.7 181 61.3
TPR.G37174 Trifolium pratense HOM05D006908 ORTHO05D008662 1.7e-55 219.9 181 56.9
Ciclev10025928m.g Citrus clementina HOM05D006908 ORTHO05D008662 2.2e-55 219.5 185 58.9
CsaV3_3G025130 Cucumis sativus L. HOM05D006908 ORTHO05D008662 2.9e-55 219.2 190 58.9
Medtr2g102040 Medicago truncatula HOM05D006908 ORTHO05D008662 2.9e-55 219.2 180 57.2
MELO3C012958.2 Cucumis melo HOM05D006908 ORTHO05D008662 8.5e-55 217.6 187 59.4
Eucgr.J02986 Eucalyptus grandis HOM05D006908 ORTHO05D008662 1.1e-54 217.2 185 57.8
Migut.I00872 Erythranthe guttata HOM05D006908 ORTHO05D008662 1.4e-54 216.9 189 55.6
EL10Ac9g22006 Beta vulgaris HOM05D006908 ORTHO05D008662 2.5e-54 216.1 183 60.1
arahy.Tifrunner.gnm1.ann1.0IDI1A Arachis hypogaea HOM05D006908 ORTHO05D008662 4.7e-53 211.8 181 56.4
arahy.Tifrunner.gnm1.ann1.UK934I Arachis hypogaea HOM05D006908 ORTHO05D008662 4.7e-53 211.8 181 56.4
Psat5g298720 Pisum sativum HOM05D006908 ORTHO05D008662 1.8e-52 209.9 180 55.0
Aqoxy7G01689 Aquilegia oxysepala HOM05D006908 ORTHO05D008662 2.3e-52 209.5 158 63.3
Sed0021689 Sechium edule HOM05D006908 ORTHO05D008662 8.8e-52 207.6 183 56.8
Hund06614 Selenicereus undatus HOM05D006908 ORTHO05D008662 2.6e-51 206.1 182 57.1
CDE02G0011 Ceratophyllum demersum HOM05D006908 ORTHO05D008662 4.4e-51 205.3 181 55.8
Ah.01g005440 Amaranthus hybridus HOM05D006908 ORTHO05D008662 9.7e-51 204.1 178 57.9
AUR62042927 Chenopodium quinoa HOM05D006908 ORTHO05D008662 3.7e-50 202.2 195 53.3
ATR0602G186 Amborella trichopoda HOM05D006908 ORTHO05D008662 4.8e-50 201.8 173 51.4
HPP92_003725 Vanilla planifolia HOM05D006908 ORTHO05D008662 4.8e-50 201.8 185 53.0
Zm00001eb275430 Zea mays HOM05D006908 ORTHO05D008662 1.4e-49 200.3 181 53.6
Aa31LG4G230 Aethionema arabicum HOM05D006908 ORTHO05D008662 3.1e-49 199.1 190 53.7
Nitab4.5_0000671g0150 Nicotiana tabacum HOM05D006908 ORTHO05D008662 2.0e-48 196.4 188 54.8
Carub.0002s2758 Capsella rubella HOM05D006908 ORTHO05D008662 4.5e-48 195.3 182 52.7
CARHR074570 Cardamine hirsuta HOM05D006908 ORTHO05D008662 7.7e-48 194.5 181 53.6
BcaC08g47561 Brassica carinata HOM05D006908 ORTHO05D008662 1.0e-47 194.1 179 53.6
Sp5g35850 Schrenkiella parvula HOM05D006908 ORTHO05D008662 1.0e-47 194.1 179 54.7
BcaC08g47592 Brassica carinata HOM05D002960 ORTHO05D003632 1.3e-47 193.7 179 53.1
C06p54330 Brassica napus HOM05D002960 ORTHO05D003632 1.3e-47 193.7 179 53.1
BolC6t40444H Brassica oleracea HOM05D002960 ORTHO05D003632 1.3e-47 193.7 179 53.1
BraA07t32051Z Brassica rapa HOM05D006908 ORTHO05D008662 1.3e-47 193.7 183 53.6
Gohir.A09G082800 Gossypium hirsutum HOM05D006908 ORTHO05D008662 2.2e-47 193.0 197 49.7
Thhalv10018901m.g Eutrema salsugineum HOM05D006908 ORTHO05D008662 3.8e-47 192.2 179 54.7
MBI15_g13424_MAGBIO Magnolia biondii HOM05D006908 ORTHO05D008662 5.0e-47 191.8 128 69.5
Hma1.2p1_0323F.1_g125130 Hydrangea macrophylla HOM05D006908 ORTHO05D008662 6.5e-47 191.4 121 74.4
SHI10939 Sapria himalayana HOM05D006908 ORTHO05D008662 8.5e-47 191.0 199 49.7
AUR62016450 Chenopodium quinoa HOM05D006908 ORTHO05D008662 1.5e-46 190.3 185 53.0
Lsat_1_v5_gn_1_35121 Lactuca sativa HOM05D006908 ORTHO05D008662 3.2e-46 189.1 189 54.0
AT1G79915 Arabidopsis thaliana HOM05D006908 ORTHO05D008662 3.6e-45 185.7 184 51.1
Os06g0639300 Oryza sativa ssp. japonica HOM05D006908 ORTHO05D008662 4.7e-45 185.3 184 50.0
THA.LOC104812520 Tarenaya hassleriana HOM05D006908 ORTHO05D008662 8.0e-45 184.5 179 50.8
A07p45490 Brassica napus HOM05D006908 ORTHO05D008662 1.0e-44 184.1 213 46.9
unitig_52.g17450 Utricularia gibba HOM05D006908 ORTHO05D008662 2.3e-44 183.0 188 50.5
SEGI_13943 Sequoiadendron giganteum HOM05D006908 ORTHO05D008662 3.0e-44 182.6 204 45.1
Potri.001G181200 Populus trichocarpa HOM05D006908 ORTHO05D008662 6.3e-42 174.9 150 58.7
BcaC04g22058 Brassica carinata HOM05D006908 ORTHO05D008662 1.7e-39 166.8 202 48.0
Mapoly0072s0004 Marchantia polymorpha HOM05D006908 ORTHO05D008662 2.3e-36 156.4 188 42.6
FAN02G3381 Fragaria x ananassa HOM05D006908 ORTHO05D008662 1.5e-35 153.7 178 46.6
C09p24020 Brassica napus HOM05D006908 ORTHO05D008662 7.5e-35 151.4 183 47.0
AagrBONN_evm.TU.Sc2ySwM_344.5185 Anthoceros agrestis HOM05D006908 ORTHO05D008662 1.7e-34 150.2 183 44.8
AUR62033073 Chenopodium quinoa HOM05D006908 ORTHO05D008662 1.8e-33 146.7 136 54.4
Pp3c16_8290 Physcomitrium patens HOM05D006908 ORTHO05D008662 5.9e-32 141.7 194 38.1
CBR_g20274 Chara braunii HOM05D006908 ORTHO05D008662 7.7e-32 141.4 211 37.9
Cfa002075 Carpinus fangiana HOM05D006908 ORTHO05D008662 1.7e-26 123.6 103 60.2
Cpa.g.sc41.12 Carica papaya HOM05D006908 ORTHO05D008662 3.1e-25 119.4 88 64.8
AL2G41640 Arabidopsis lyrata HOM05D006908 ORTHO05D008662 3.8e-23 112.5 157 42.7
BolC9t55322H Brassica oleracea HOM05D006908 ORTHO05D008662 7.3e-22 108.2 93 59.1
Actinidia32749 Actinidia chinensis HOM05D006908 ORTHO05D008662 2.6e-11 73.2 48 66.7
Cpa.g.sc41.11 Carica papaya HOM05D006908 ORTHO05D008662 1.1e-06 57.8 43 58.1


User provided reference genes

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