Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029570 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 1.9e-217 758.8 369 100.0
Actinidia34161 Actinidia chinensis HOM05D002465 ORTHO05D005308 1.0e-170 603.6 348 84.8
vmacro06621 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 9.9e-166 587.0 350 82.3
Dinv35264 Davidia involucrata HOM05D002465 ORTHO05D005308 1.6e-155 553.1 347 76.7
Cfa016295 Carpinus fangiana HOM05D002465 ORTHO05D005308 9.6e-145 517.3 349 73.1
Haze_00055 Corylus avellana HOM05D002465 ORTHO05D005308 1.1e-143 513.8 350 72.6
QL09p012529 Quercus lobata HOM05D002465 ORTHO05D005308 9.9e-142 507.3 349 71.9
GSVIVG01028829001 Vitis vinifera HOM05D002465 ORTHO05D005308 2.5e-140 502.7 349 73.1
Nitab4.5_0007593g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 7.1e-140 501.1 352 69.3
Prupe.2G301900 Prunus persica HOM05D002465 ORTHO05D005308 7.1e-140 501.1 350 70.0
CAN.G290.13 Capsicum annuum HOM05D002465 ORTHO05D005308 1.1e-137 493.8 348 67.8
MD01G1209800 Malus domestica HOM05D002465 ORTHO05D005308 9.6e-137 490.7 350 68.3
Gohir.D12G255900 Gossypium hirsutum HOM05D002465 ORTHO05D005308 2.1e-136 489.6 349 69.1
Gorai.008G274000 Gossypium raimondii HOM05D002465 ORTHO05D005308 6.2e-136 488.0 349 69.1
Thecc.03G185500 Theobroma cacao HOM05D002465 ORTHO05D005308 3.1e-135 485.7 349 68.5
Manes.06G153300 Manihot esculenta HOM05D002465 ORTHO05D005308 9.0e-135 484.2 350 69.4
Migut.F00281 Erythranthe guttata HOM05D002465 ORTHO05D005308 2.0e-134 483.0 347 70.0
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 3.4e-134 482.3 329 70.8
Ciclev10006841m.g Citrus clementina HOM05D002465 ORTHO05D005308 7.6e-134 481.1 349 68.2
Cc02_g02290 Coffea canephora HOM05D002465 ORTHO05D005308 1.0e-133 480.7 355 65.6
COL.COLO4_30301 Corchorus olitorius HOM05D002465 ORTHO05D005308 1.3e-133 480.3 360 66.4
Sopen12g022610 Solanum pennellii HOM05D002465 ORTHO05D005308 1.3e-133 480.3 348 68.7
Eucgr.A02722 Eucalyptus grandis HOM05D002465 ORTHO05D005308 5.5e-132 474.9 349 68.8
PSO170G2577 Papaver somniferum HOM05D002465 ORTHO05D005308 5.5e-132 474.9 351 67.0
Aqoxy5G04085 Aquilegia oxysepala HOM05D002465 ORTHO05D005308 7.1e-132 474.6 353 67.1
CiPaw.05G261600 Carya illinoinensis HOM05D002465 ORTHO05D005308 7.1e-132 474.6 349 67.9
FvH4_7g30390 Fragaria vesca HOM05D002465 ORTHO05D005308 1.2e-131 473.8 351 67.2
FAN10G1194 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.6e-131 473.4 351 67.8
Lsat_1_v5_gn_9_56800 Lactuca sativa HOM05D002465 ORTHO05D005308 1.6e-131 473.4 348 66.1
RcHm_v2.0_Chr1g0378531 Rosa chinensis HOM05D002465 ORTHO05D005308 2.7e-131 472.6 353 68.0
Sabra17G0123700 Salix brachista HOM05D002465 ORTHO05D005308 4.6e-131 471.9 353 66.3
Potri.017G148000 Populus trichocarpa HOM05D002465 ORTHO05D005308 7.9e-131 471.1 349 67.0
TWI23G1289 Tripterygium wilfordii HOM05D002465 ORTHO05D005308 7.9e-131 471.1 354 66.7
FAN06G0430 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.3e-130 470.3 351 67.2
FAN06G3650 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.8e-130 469.9 351 67.2
Sc13g0009230 Simmondsia chinensis HOM05D002465 ORTHO05D005308 1.8e-130 469.9 351 67.0
DCAR_008895 Daucus carota HOM05D002465 ORTHO05D005308 2.3e-130 469.5 381 60.4
FAN01G1269 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.0e-130 469.2 351 67.0
EL10Ac3g05400 Beta vulgaris HOM05D002465 ORTHO05D005308 8.7e-130 467.6 349 64.5
Sabra17G0123300 Salix brachista HOM05D002465 ORTHO05D005308 8.7e-130 467.6 354 66.1
HanXRQChr15g0494161 Helianthus annuus HOM05D002465 ORTHO05D005308 2.5e-129 466.1 347 66.9
Hund04793 Selenicereus undatus HOM05D002465 ORTHO05D005308 5.7e-129 464.9 349 66.8
Nitab4.5_0008234g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 8.2e-128 461.1 352 65.3
SalBow4G2218 Salvia bowleyana HOM05D002465 ORTHO05D005308 1.4e-127 460.3 348 63.8
FAN03G3136 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.2e-126 457.2 382 62.3
TPR.G9187 Trifolium pratense HOM05D002465 ORTHO05D005308 2.6e-126 456.1 354 64.4
AUR62021107 Chenopodium quinoa HOM05D002465 ORTHO05D005308 3.4e-126 455.7 349 64.2
ECA232G4104 Erigeron canadensis HOM05D002465 ORTHO05D005308 5.9e-126 454.9 349 66.2
Cpa.g.sc107.121 Carica papaya HOM05D002465 ORTHO05D005308 1.7e-125 453.4 349 64.8
MSTRG.8702 Avicennia marina HOM05D002465 ORTHO05D005308 2.2e-125 453.0 340 67.1
AUR62031432 Chenopodium quinoa HOM05D002465 ORTHO05D005308 2.9e-125 452.6 349 63.6
Medtr6g052330 Medicago truncatula HOM05D002465 ORTHO05D005308 1.4e-124 450.3 356 62.6
PGR042G3288 Punica granatum HOM05D002465 ORTHO05D005308 2.5e-124 449.5 350 64.0
Oeu036031.1 Olea europaea HOM05D002465 ORTHO05D005308 4.2e-124 448.7 349 64.8
TAR374G1583 Trochodendron aralioides HOM05D002465 ORTHO05D005308 4.2e-124 448.7 272 79.4
Lj2g0016146 Lotus japonicus HOM05D002465 ORTHO05D005308 7.2e-124 448.0 354 64.1
CsaV3_3G017530 Cucumis sativus L. HOM05D002465 ORTHO05D005308 9.4e-124 447.6 348 64.4
FAN10G1435 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.7e-123 446.0 340 66.5
Psat0s1684g0080 Pisum sativum HOM05D002465 ORTHO05D005308 3.6e-123 445.7 354 64.7
ClCG05G008450 Citrullus lanatus HOM05D002465 ORTHO05D005308 1.8e-122 443.4 342 66.1
arahy.Tifrunner.gnm1.ann1.TJ5MNL Arachis hypogaea HOM05D002465 ORTHO05D005308 5.1e-122 441.8 356 64.3
Glyma.09G129600 Glycine max HOM05D002465 ORTHO05D005308 8.8e-122 441.0 356 61.2
Nn1g01670 Nelumbo nucifera HOM05D002465 ORTHO05D005308 2.0e-121 439.9 267 79.8
THA.LOC104811947 Tarenaya hassleriana HOM05D002465 ORTHO05D005308 4.3e-121 438.7 352 62.8
arahy.Tifrunner.gnm1.ann1.77GMEU Arachis hypogaea HOM05D002465 ORTHO05D005308 9.7e-121 437.6 356 63.8
Duzib205G0901 Durio zibethinus HOM05D002465 ORTHO05D005308 4.8e-120 435.3 349 61.9
Thhalv10012991m.g Eutrema salsugineum HOM05D002465 ORTHO05D005308 4.8e-120 435.3 351 63.0
SGA_v2.0_scaffold60G21117 Striga asiatica HOM05D002465 ORTHO05D005308 9.1e-119 431.0 394 56.9
Sed0022656 Sechium edule HOM05D002465 ORTHO05D005308 2.2e-117 426.4 342 64.3
Lalb_Chr19g0130571 Lupinus albus HOM05D002465 ORTHO05D005308 3.8e-117 425.6 354 60.7
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 1.1e-116 424.1 349 62.5
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 1.4e-116 423.7 351 61.0
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 1.4e-116 423.7 358 60.1
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 1.9e-116 423.3 357 60.2
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.9e-116 423.3 351 61.0
Carub.0008s1296 Capsella rubella HOM05D002465 ORTHO05D005308 2.5e-116 422.9 353 60.9
BcaB05g21981 Brassica carinata HOM05D002465 ORTHO05D005308 3.2e-116 422.5 348 62.4
BcaC03g14499 Brassica carinata HOM05D002465 ORTHO05D005308 3.2e-116 422.5 350 61.1
MBI04_g26956_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 9.4e-116 421.0 280 71.4
Rhsim03G0191700 Rhododendron simsii HOM05D002465 ORTHO05D005308 3.9e-114 415.6 265 77.0
RcHm_v2.0_Chr3g0497461 Rosa chinensis HOM05D002465 ORTHO05D005308 6.7e-114 414.8 280 72.9
Aa31LG3G9040 Aethionema arabicum HOM05D002465 ORTHO05D005308 2.6e-113 412.9 369 58.3
AL8G27230 Arabidopsis lyrata HOM05D002465 ORTHO05D005308 4.4e-113 412.1 356 60.4
Gohir.A12G253600 Gossypium hirsutum HOM05D002465 ORTHO05D005308 9.7e-113 411.0 300 66.7
Ah.07g206490 Amaranthus hybridus HOM05D002465 ORTHO05D005308 2.2e-112 409.8 331 61.3
unitig_52.g17726 Utricularia gibba HOM05D002465 ORTHO05D005308 6.3e-112 408.3 358 59.2
Atru.BG.183.p Acer truncatum HOM05D002465 ORTHO05D005308 9.1e-111 404.4 348 61.2
Os07g0467900 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D005308 1.7e-109 400.2 353 57.2
AT5G52800 Arabidopsis thaliana HOM05D002465 ORTHO05D005308 8.5e-109 397.9 353 58.1
ATR0661G279 Amborella trichopoda HOM05D002465 ORTHO05D005308 7.2e-108 394.8 338 59.5
Phvul.004G106200 Phaseolus vulgaris HOM05D002465 ORTHO05D005308 1.2e-107 394.0 359 56.8
SHI09096 Sapria himalayana HOM05D002465 ORTHO05D005308 2.6e-105 386.3 334 57.8
Hma1.2p1_0274F.1_g110040 Hydrangea macrophylla HOM05D002465 ORTHO05D005308 2.0e-97 360.1 278 64.7
Ca_26606_v3 Cicer arietinum L. HOM05D002465 ORTHO05D005308 1.3e-96 357.5 306 60.1
DCAR_018565 Daucus carota HOM05D002465 ORTHO05D005308 7.0e-95 351.7 252 64.7
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 3.5e-94 349.4 243 66.3
MELO3C006956.2 Cucumis melo HOM05D002465 ORTHO05D005308 6.5e-93 345.1 340 55.0
HPP92_015081 Vanilla planifolia HOM05D002465 ORTHO05D005308 1.0e-90 337.8 279 60.6
VMungo0464G1215 Vigna mungo HOM05D002465 ORTHO05D005308 1.0e-90 337.8 297 58.2
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 2.5e-84 316.6 223 69.1
Peaxi162Scf00023g00823 Petunia axillaris HOM05D002465 ORTHO05D005308 3.3e-84 316.2 210 71.0
AagrBONN_evm.TU.Sc2ySwM_228.3313 Anthoceros agrestis HOM05D002465 ORTHO05D005308 3.0e-82 309.7 359 49.0
Mapoly0051s0060 Marchantia polymorpha HOM05D002465 ORTHO05D005308 2.8e-80 303.1 373 44.2
Pp3c1_12340 Physcomitrium patens HOM05D002465 ORTHO05D005308 5.4e-79 298.9 364 46.2
SMO103G0001 Selaginella moellendorffii HOM05D002465 ORTHO05D005308 1.9e-71 273.9 267 52.4
DCAR_005086 Daucus carota HOM05D002465 ORTHO05D005308 1.1e-68 264.6 206 60.2
DCAR_030059 Daucus carota HOM05D002465 ORTHO05D005308 4.3e-68 262.7 181 66.3
SEGI_25618 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 4.7e-67 259.2 230 55.2
Sabra17G0121400 Salix brachista HOM05D002465 ORTHO05D005308 6.2e-67 258.8 360 43.3
FAN05G2518 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.2e-65 254.6 162 74.7
FAN09G4610 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.2e-65 254.6 162 74.7
FAN10G2552 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.2e-65 254.6 162 74.7
FAN25G3664 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.2e-65 254.6 162 74.7
DCAR_029376 Daucus carota HOM05D002465 ORTHO05D005308 9.2e-63 245.0 155 69.0
CBR_g36403 Chara braunii HOM05D002465 ORTHO05D005308 2.3e-61 240.4 298 43.3
Oeu058603.1 Olea europaea HOM05D002465 ORTHO05D005308 3.1e-58 229.9 191 62.3
Actinidia08585 Actinidia chinensis HOM05D002465 ORTHO05D005308 1.9e-47 194.1 141 70.2
MCO12G313 Micromonas commoda HOM05D002465 ORTHO05D005308 1.0e-37 161.8 206 46.1
FAN03G1432 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.2e-35 152.5 160 51.9
FAN09G0727 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.2e-35 152.5 160 51.9
FAN09G3189 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.2e-35 152.5 160 51.9
FAN14G0324 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.2e-35 152.5 160 51.9
FAN16G1547 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.2e-35 152.5 160 51.9
FAN21G0521 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.2e-35 152.5 160 51.9
FAN22G1212 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.2e-35 152.5 160 51.9
FAN25G1827 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.2e-35 152.5 160 51.9
FAN25G2717 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.2e-35 152.5 160 51.9
FAN27G0148 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.2e-35 152.5 160 51.9
FAN27G0541 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.2e-35 152.5 160 51.9
FAN27G0848 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.2e-35 152.5 160 51.9
FAN28G0992 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.2e-35 152.5 160 51.9
PRCOL_00005773 Prasinoderma coloniale HOM05D002465 ORTHO05D005308 4.0e-26 123.2 206 39.8
CBR_g81559 Chara braunii HOM05D002465 ORTHO05D005308 5.5e-23 112.8 172 36.0
CANSAT21G2443 Cannabis sativa HOM05D002465 ORTHO05D005308 7.9e-22 109.0 73 68.5
Sabra17G0121500 Salix brachista HOM05D002465 ORTHO05D005308 1.3e-21 108.2 135 44.4
FAN23G0684 Fragaria x ananassa HOM05D002465 ORTHO05D000592 2.1e-19 100.9 159 39.6
Psat0s1616g0040 Pisum sativum HOM05D002465 ORTHO05D005308 1.4e-18 98.2 74 66.2
MD01G1209700 Malus domestica HOM05D002465 ORTHO05D005308 5.3e-18 96.3 72 65.3
CBR_g19350 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-16 90.5 141 35.5
Cre17.g705150 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D005308 2.7e-14 84.0 106 47.2
Solyc12g044350.1 Solanum lycopersicum HOM05D002465 ORTHO05D005308 2.2e-11 74.3 70 58.6
FAN01G2746 Fragaria x ananassa HOM05D000539 ORTHO05D000592 9.0e-10 68.9 54 63.0
Peaxi162Scf00023g00818 Petunia axillaris HOM05D002465 ORTHO05D005308 5.9e-09 66.2 69 49.3
CBR_g47978 Chara braunii HOM05D002465 ORTHO05D005308 3.2e-07 60.5 100 33.0
MBI04_g15062_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 5.5e-07 59.7 167 32.9
Cre12.g553253 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D145954 9.4e-07 58.9 48 50.0
Sabra18G0007300 Salix brachista HOM05D002718 ORTHO05D003269 1.2e-06 58.5 31 83.9
Eucgr.C03079 Eucalyptus grandis HOM05D002465 ORTHO05D194609 2.1e-06 57.8 48 58.3


User provided reference genes

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