Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 0.0e+00 1201.4 650 100.0
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 0.0e+00 1183.7 650 98.6
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 1.1e-284 983.0 651 80.3
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 6.0e-275 950.7 654 78.4
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 2.4e-271 938.7 655 79.8
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 3.1e-271 938.3 650 76.2
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 1.1e-263 913.3 658 73.4
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 1.0e-250 870.2 649 71.8
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 1.9e-249 865.9 651 73.7
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 2.2e-245 852.4 651 73.7
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 9.3e-244 847.0 639 71.2
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 1.2e-243 846.7 651 72.2
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 1.6e-243 846.3 652 69.6
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 8.7e-242 840.5 652 69.2
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 8.2e-240 833.9 649 69.0
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 3.1e-239 832.0 649 69.0
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 5.9e-238 827.8 663 67.6
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 3.8e-237 825.1 655 68.7
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 3.2e-236 822.0 661 70.7
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 4.2e-236 821.6 673 68.1
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 9.4e-236 820.5 651 70.8
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 6.1e-235 817.8 664 67.0
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 1.7e-232 809.7 672 66.8
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 1.1e-231 807.0 639 68.7
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 3.4e-230 802.0 671 65.1
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 5.9e-230 801.2 658 68.4
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 5.9e-230 801.2 675 66.4
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 1.1e-228 797.0 645 67.8
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 1.9e-228 796.2 645 67.9
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 4.2e-228 795.0 672 66.7
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 1.2e-227 793.5 671 64.8
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 4.7e-227 791.6 673 66.1
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 4.7e-227 791.6 671 65.0
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 2.3e-226 789.3 671 65.0
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 3.0e-226 788.9 645 66.0
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 1.5e-225 786.6 671 64.4
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 2.0e-225 786.2 652 66.3
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 7.4e-225 784.3 654 66.1
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 7.4e-225 784.3 654 65.7
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 2.8e-224 782.3 669 64.4
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 2.8e-224 782.3 659 64.8
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 9.1e-223 777.3 664 66.3
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.2e-222 776.9 652 65.5
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.2e-222 776.9 664 66.0
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 2.0e-222 776.2 649 64.9
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 4.5e-222 775.0 671 63.9
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 1.7e-221 773.1 665 65.0
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 1.1e-220 770.4 659 63.7
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 2.5e-220 769.2 656 65.4
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 3.2e-220 768.8 644 64.0
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 1.2e-219 766.9 649 65.2
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 3.6e-219 765.4 656 65.4
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 4.7e-219 765.0 672 63.4
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 6.1e-219 764.6 654 65.4
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 1.0e-218 763.8 640 67.0
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 2.8e-216 755.7 655 63.7
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 2.4e-215 752.7 659 64.3
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 2.4e-215 752.7 659 64.3
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 3.1e-215 752.3 655 63.2
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 5.3e-215 751.5 671 64.8
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 7.0e-215 751.1 671 62.0
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 1.5e-212 743.4 653 64.9
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 1.9e-212 743.0 639 62.4
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 9.4e-212 740.7 652 63.3
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 1.6e-211 740.0 655 62.0
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 3.0e-210 735.7 470 82.6
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 1.5e-209 733.4 651 65.7
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 2.2e-208 729.6 641 62.1
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 3.7e-208 728.8 652 64.7
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 1.8e-207 726.5 653 64.6
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 3.1e-207 725.7 578 69.4
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 2.7e-206 722.6 632 63.1
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 4.5e-206 721.8 647 62.4
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 5.0e-205 718.4 602 66.3
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 1.1e-204 717.2 669 61.3
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 9.4e-204 714.1 653 63.7
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 1.6e-203 713.4 649 61.9
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 1.0e-202 710.7 655 61.8
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 5.2e-202 708.4 664 60.8
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 5.7e-201 704.9 632 64.2
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 3.7e-200 702.2 643 63.5
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 1.4e-194 683.7 654 58.3
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 7.5e-193 677.9 652 58.3
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.4e-191 673.7 653 58.0
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 4.5e-190 668.7 685 56.9
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 5.9e-190 668.3 657 58.1
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 1.0e-189 667.5 671 59.8
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 1.2e-185 654.1 675 55.0
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 3.7e-184 649.0 684 55.1
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 3.7e-184 649.0 683 54.5
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 4.9e-184 648.7 684 55.1
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 2.7e-182 642.9 664 55.4
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 1.4e-178 630.6 689 53.8
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 3.4e-177 625.9 678 54.3
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 1.1e-175 620.9 681 53.7
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 2.4e-175 619.8 678 53.5
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 1.2e-174 617.5 682 53.4
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 1.2e-174 617.5 685 52.7
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 1.2e-171 607.4 622 56.4
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 1.7e-149 533.9 652 51.5
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 3.2e-135 486.5 689 44.0
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 4.6e-134 482.6 373 74.5
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 1.9e-127 460.7 560 49.1
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 7.1e-127 458.8 677 41.7
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 6.1e-126 455.7 627 46.3
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 1.1e-122 444.9 686 40.4
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 2.5e-116 423.7 310 74.8
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 2.7e-110 403.7 642 39.7
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 4.7e-102 376.3 320 64.1
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 1.7e-99 367.9 333 59.5
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 1.0e-96 358.6 371 56.1
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 1.5e-87 328.2 244 70.1
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 1.2e-76 292.0 598 33.3
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 2.4e-58 231.1 245 54.3
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 2.4e-45 188.0 321 41.7
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 6.4e-43 179.9 261 45.6
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 4.6e-41 173.7 222 44.1
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 1.1e-29 136.0 356 31.2
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.4e-18 99.0 178 34.3
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 5.7e-15 87.0 90 54.4
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 2.2e-11 75.1 200 30.5
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 1.5e-07 62.4 222 28.4


User provided reference genes

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