Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 4.1e-108 394.8 210 100.0
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.0e-82 310.5 210 84.8
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 5.6e-73 278.1 210 76.7
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.1e-65 253.8 213 69.5
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 8.9e-63 244.2 213 68.1
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 4.2e-60 235.3 215 65.1
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 1.7e-58 229.9 213 62.4
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.5e-57 226.1 209 67.0
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 3.1e-55 219.2 212 61.3
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 2.2e-53 213.0 209 61.7
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 1.4e-52 210.3 214 59.3
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 4.6e-51 205.3 214 59.8
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 6.6e-50 201.4 215 56.3
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 1.1e-49 200.7 214 59.3
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 3.3e-49 199.1 211 59.2
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 2.8e-48 196.1 212 57.5
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 4.8e-48 195.3 214 58.4
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 8.1e-48 194.5 212 58.0
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 2.4e-47 193.0 214 54.7
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 2.4e-47 193.0 217 56.7
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 3.1e-47 192.6 211 55.5
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 1.2e-46 190.7 214 60.7
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 1.2e-46 190.7 213 57.7
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 2.6e-46 189.5 216 58.3
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 7.6e-46 188.0 212 57.5
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 1.7e-45 186.8 211 55.0
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 6.4e-45 184.9 215 54.9
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 1.1e-44 184.1 213 56.3
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 5.4e-44 181.8 211 54.5
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 9.3e-44 181.0 211 55.5
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 9.3e-44 181.0 215 58.1
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 4.6e-43 178.7 219 55.3
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 7.9e-43 177.9 217 54.4
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 7.9e-43 177.9 217 54.4
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 1.3e-42 177.2 215 54.9
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 1.8e-42 176.8 215 57.7
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 3.0e-42 176.0 210 54.8
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 3.0e-42 176.0 213 57.7
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 1.1e-41 174.1 214 53.7
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 1.9e-41 173.3 217 51.6
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 2.5e-41 172.9 216 56.9
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 3.3e-41 172.6 213 53.1
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 7.4e-41 171.4 212 53.3
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 1.3e-40 170.6 212 51.4
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 1.6e-40 170.2 215 54.9
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 1.8e-39 166.8 211 53.1
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 2.4e-39 166.4 214 53.3
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 2.6e-38 162.9 219 50.7
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 7.6e-38 161.4 212 51.4
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 1.3e-37 160.6 222 50.9
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 1.7e-37 160.2 212 51.4
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 2.5e-36 156.4 216 52.3
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 3.2e-36 156.0 213 51.6
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 3.2e-36 156.0 217 49.3
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 5.5e-36 155.2 217 49.8
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 1.6e-35 153.7 207 52.7
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 3.5e-35 152.5 217 48.8
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 3.5e-35 152.5 216 49.5
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 6.0e-35 151.8 221 48.0
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 1.3e-34 150.6 217 48.8
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 3.9e-34 149.1 209 50.2
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 1.1e-33 147.5 189 51.3
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 1.5e-33 147.1 217 48.4
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 1.9e-33 146.7 198 53.0
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 2.5e-33 146.4 224 48.2
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.3e-32 144.1 198 52.5
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 1.3e-32 144.1 201 49.3
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 3.7e-32 142.5 202 49.5
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 1.1e-31 141.0 198 50.0
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 1.4e-31 140.6 188 47.3
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 1.8e-31 140.2 193 50.8
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 1.8e-31 140.2 214 50.9
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 2.4e-31 139.8 221 46.6
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 3.1e-31 139.4 208 48.6
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 4.5e-30 135.6 213 49.3
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 1.0e-29 134.4 149 57.7
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 2.2e-29 133.3 205 48.3
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 2.9e-29 132.9 222 45.0
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 3.8e-29 132.5 193 47.2
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 6.5e-29 131.7 217 44.2
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 8.4e-29 131.3 219 45.2
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 1.1e-28 131.0 208 44.2
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 1.9e-28 130.2 218 45.4
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 1.9e-28 130.2 193 47.7
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 1.9e-28 130.2 219 44.7
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 3.2e-28 129.4 209 45.5
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 9.3e-28 127.9 202 42.1
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 1.2e-27 127.5 218 43.6
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 1.6e-27 127.1 170 51.2
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 2.7e-27 126.3 216 43.5
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 4.6e-27 125.6 213 43.7
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 1.0e-26 124.4 200 47.0
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 2.3e-26 123.2 217 44.7
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 9.7e-25 117.9 209 44.0
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 9.7e-25 117.9 246 41.9
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 1.3e-24 117.5 210 45.2
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 2.8e-24 116.3 125 59.2
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 3.7e-24 115.9 196 43.9
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 8.2e-24 114.8 218 42.2
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 2.4e-23 113.2 208 46.2
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 3.1e-23 112.8 214 44.9
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 5.3e-23 112.1 215 43.7
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 1.5e-22 110.5 199 44.2
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 1.5e-22 110.5 199 44.2
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 1.5e-22 110.5 200 43.5
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 2.0e-22 110.2 202 44.1
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 2.6e-22 109.8 195 45.6
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 2.6e-22 109.8 178 44.4
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 3.4e-22 109.4 202 43.6
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 3.4e-22 109.4 215 43.7
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 7.7e-22 108.2 200 43.0
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 3.2e-20 102.8 167 48.5
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 3.2e-20 102.8 167 48.5
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 7.9e-19 98.2 205 42.4
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 6.9e-15 85.1 88 55.7
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 7.7e-14 81.6 175 38.9
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 1.3e-13 80.9 105 53.3
AUR62036861 Chenopodium quinoa HOM05D005571 ORTHO05D006919 2.9e-13 79.7 191 35.1
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 1.1e-12 77.8 103 49.5
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 1.4e-12 77.4 181 37.0
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 2.5e-12 76.6 179 38.0
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 1.8e-10 70.5 179 38.0
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 1.8e-10 70.5 179 38.0
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 1.8e-10 70.5 179 38.0
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 5.1e-10 68.9 193 37.3
Gohir.A02G084300 Gossypium hirsutum HOM05D005571 ORTHO05D006919 5.1e-10 68.9 146 40.4
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 4.4e-09 65.9 187 36.4
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 7.4e-09 65.1 140 37.1
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 7.4e-09 65.1 140 37.1
CDE04G0695 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 7.4e-09 65.1 187 33.2
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 2.2e-08 63.5 115 42.6
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 2.2e-08 63.5 115 42.6
ECA238G3056 Erigeron canadensis HOM05D002204 ORTHO05D002875 1.4e-07 60.8 105 42.9
Sabra11G0115000 Salix brachista HOM05D005571 ORTHO05D006919 1.8e-07 60.5 84 50.0
Sabra11G0115600 Salix brachista HOM05D005571 ORTHO05D006919 1.8e-07 60.5 84 50.0
HPP92_021048 Vanilla planifolia HOM05D005571 ORTHO05D006919 4.1e-07 59.3 209 34.0


User provided reference genes

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