Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029440 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 3.4e-38 161.0 72 100.0
CSS0008176 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.2e-37 158.3 72 98.6
CSS0041206 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.2e-37 158.3 72 98.6
CSS0048347 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 6.4e-37 156.8 72 97.2
CSS0034492 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.4e-36 155.6 72 97.2
CSS0045597 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.7e-35 151.4 72 93.1
CSS0017977 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.6e-27 125.6 54 98.1
CSS0015566 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 6.7e-26 120.2 57 89.5
CSS0024264 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.4e-23 112.5 57 84.2
Dinv16998 Davidia involucrata HOM05D002515 ORTHO05D002722 5.0e-21 104.0 69 60.9
Dinv43153 Davidia involucrata HOM05D002515 ORTHO05D002722 5.0e-21 104.0 69 60.9
Actinidia07036 Actinidia chinensis HOM05D002515 ORTHO05D002722 3.3e-17 91.3 54 70.4
Actinidia37204 Actinidia chinensis HOM05D002515 ORTHO05D002722 1.1e-15 86.3 55 63.6
CSS0020060 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.4e-15 85.1 55 65.5
CSS0030774 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.4e-15 85.1 55 65.5
CSS0025806 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 9.0e-15 83.2 64 56.2
CSS0044145 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 9.0e-15 83.2 55 61.8
vmacro03074 Vaccinium macrocarpon HOM05D002515 ORTHO05D002722 5.9e-14 80.5 55 58.2
Rhsim13G0082900 Rhododendron simsii HOM05D002515 ORTHO05D002722 2.2e-13 78.6 55 56.4
Oeu019195.1 Olea europaea HOM05D006354 ORTHO05D007773 1.4e-12 75.9 54 51.9
GSVIVG01024972001 Vitis vinifera HOM05D002515 ORTHO05D002722 2.1e-11 72.0 54 55.6
Actinidia13143 Actinidia chinensis HOM05D002515 ORTHO05D002722 2.7e-11 71.6 61 50.8
TAR633G1102 Trochodendron aralioides HOM05D002515 ORTHO05D002722 2.7e-11 71.6 56 55.4
Cfa011498 Carpinus fangiana HOM05D002515 ORTHO05D006653 6.7e-10 67.0 69 49.3
Migut.D02105 Erythranthe guttata HOM05D002515 ORTHO05D002722 8.8e-10 66.6 48 50.0
TAR636G0721 Trochodendron aralioides HOM05D002515 ORTHO05D002722 1.1e-09 66.2 55 50.9
Actinidia05311 Actinidia chinensis HOM05D002515 ORTHO05D002722 2.0e-09 65.5 55 54.5
HanXRQChr04g0105731 Helianthus annuus HOM05D002515 ORTHO05D002722 2.5e-09 65.1 67 46.3
Dinv35606 Davidia involucrata HOM05D002515 ORTHO05D002722 5.7e-09 63.9 56 50.0
Haze_24092 Corylus avellana HOM05D002515 ORTHO05D002722 7.4e-09 63.5 54 50.0
Lsat_1_v5_gn_9_23360 Lactuca sativa HOM05D002515 ORTHO05D002722 2.2e-08 62.0 78 42.3
MD04G1128800 Malus domestica HOM05D002515 ORTHO05D002722 2.2e-08 62.0 57 49.1
TAR636G1413 Trochodendron aralioides HOM05D002515 ORTHO05D002722 2.2e-08 62.0 52 50.0
DCAR_005973 Daucus carota HOM05D002515 ORTHO05D002722 2.8e-08 61.6 54 46.3
QL01p032098 Quercus lobata HOM05D002515 ORTHO05D002722 3.7e-08 61.2 68 48.5
CANSAT54G1460 Cannabis sativa HOM05D002515 ORTHO05D002722 6.3e-08 60.5 54 50.0
ClCG04G004860 Citrullus lanatus HOM05D002515 ORTHO05D002722 8.2e-08 60.1 71 39.4
MELO3C025918.2 Cucumis melo HOM05D002515 ORTHO05D002722 1.1e-07 59.7 48 50.0
Rhsim04G0156800 Rhododendron simsii HOM05D002515 ORTHO05D002722 1.1e-07 59.7 55 43.6
Rhsim04G0157000 Rhododendron simsii HOM05D002515 ORTHO05D002722 1.1e-07 59.7 55 43.6
CsaV3_6G016870 Cucumis sativus L. HOM05D002515 ORTHO05D002722 1.4e-07 59.3 48 50.0
Oeu054145.1 Olea europaea HOM05D002515 ORTHO05D002722 1.4e-07 59.3 54 46.3
Prupe.6G254700 Prunus persica HOM05D002515 ORTHO05D002722 1.4e-07 59.3 62 45.2
Thecc.09G300700 Theobroma cacao HOM05D002515 ORTHO05D002722 1.4e-07 59.3 54 48.1
Prupe.6G078200 Prunus persica HOM05D002515 ORTHO05D002722 1.8e-07 58.9 54 48.1
Cpa.g.sc81.155 Carica papaya HOM05D002515 ORTHO05D002722 2.4e-07 58.5 49 51.0
PGR119G0741 Punica granatum HOM05D002515 ORTHO05D002722 2.4e-07 58.5 49 53.1
Lsat_1_v5_gn_8_73101 Lactuca sativa HOM05D002515 ORTHO05D002722 3.1e-07 58.2 55 49.1
Duzib168G0968 Durio zibethinus HOM05D002515 ORTHO05D002722 4.1e-07 57.8 54 44.4
MD11G1109700 Malus domestica HOM05D002515 ORTHO05D002722 4.1e-07 57.8 68 44.1
PGR004G0883 Punica granatum HOM05D002515 ORTHO05D002722 4.1e-07 57.8 61 41.0
ClCG02G020160 Citrullus lanatus HOM05D002515 ORTHO05D002722 5.3e-07 57.4 48 47.9
SalBow3G0449 Salvia bowleyana HOM05D002515 ORTHO05D002722 5.3e-07 57.4 52 46.2
ECA247G2589 Erigeron canadensis HOM05D002515 ORTHO05D002722 6.9e-07 57.0 47 48.9
Potri.016G095500 Populus trichocarpa HOM05D002515 ORTHO05D002722 1.2e-06 56.2 54 46.3
CiPaw.13G094800 Carya illinoinensis HOM05D002515 ORTHO05D002722 2.6e-06 55.1 49 44.9
PGSC0003DMG400030320 Solanum tuberosum HOM05D002515 ORTHO05D002722 3.4e-06 54.7 62 32.3
Duzib093G1384 Durio zibethinus HOM05D002515 ORTHO05D002722 4.5e-06 54.3 66 40.9
MD12G1141400 Malus domestica HOM05D002515 ORTHO05D002722 4.5e-06 54.3 57 45.6
Manes.04G034800 Manihot esculenta HOM05D002515 ORTHO05D002722 4.5e-06 54.3 52 42.3
Gohir.D05G096000 Gossypium hirsutum HOM05D002515 ORTHO05D002722 7.7e-06 53.5 54 40.7
Gorai.009G099300 Gossypium raimondii HOM05D002515 ORTHO05D002722 7.7e-06 53.5 54 40.7
Lj3g0026583 Lotus japonicus HOM05D002515 ORTHO05D002722 7.7e-06 53.5 69 37.7


User provided reference genes

Program Settings