Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029436 Camellia sinensis var. sinensis HOM05D001431 ORTHO05D001268 7.9e-54 213.4 98 100.0
Duzib187G1968 Durio zibethinus HOM05D001431 ORTHO05D001268 5.2e-13 77.8 90 51.1
Duzib168G0286 Durio zibethinus HOM05D001431 ORTHO05D001268 1.2e-12 76.6 95 46.3
Actinidia14101 Actinidia chinensis HOM05D001431 ORTHO05D001268 2.0e-12 75.9 87 49.4
Ciclev10010338m.g Citrus clementina HOM05D001431 ORTHO05D001268 2.2e-11 72.4 93 41.9
COL.COLO4_18913 Corchorus olitorius HOM05D001431 ORTHO05D001268 2.8e-11 72.0 94 44.7
Manes.03G011900 Manihot esculenta HOM05D001431 ORTHO05D001268 6.3e-11 70.9 90 44.4
Manes.16G126000 Manihot esculenta HOM05D001431 ORTHO05D001268 1.4e-10 69.7 91 48.4
Gorai.010G117000 Gossypium raimondii HOM05D001431 ORTHO05D001268 3.1e-10 68.6 90 46.7
QL02p091271 Quercus lobata HOM05D001431 ORTHO05D001268 5.4e-10 67.8 91 45.1
Gohir.D06G102000 Gossypium hirsutum HOM05D001431 ORTHO05D001268 7.0e-10 67.4 90 45.6
Haze_21462 Corylus avellana HOM05D024967 ORTHO05D001268 1.2e-09 66.6 82 46.3
Gohir.A06G099800 Gossypium hirsutum HOM05D001431 ORTHO05D001268 1.6e-09 66.2 93 44.1
Peaxi162Scf00391g00002 Petunia axillaris HOM05D001431 ORTHO05D001268 2.0e-09 65.9 88 39.8
Potri.006G259300 Populus trichocarpa HOM05D001431 ORTHO05D001268 2.0e-09 65.9 92 42.4
Gohir.A06G050000 Gossypium hirsutum HOM05D001431 ORTHO05D001268 2.7e-09 65.5 92 43.5
Peaxi162Scf00108g00003 Petunia axillaris HOM05D001431 ORTHO05D001268 3.5e-09 65.1 82 42.7
ClCG06G012050 Citrullus lanatus HOM05D001431 ORTHO05D001268 5.9e-09 64.3 93 41.9
Gorai.010G056200 Gossypium raimondii HOM05D001431 ORTHO05D001268 5.9e-09 64.3 92 42.4
Sabra06G0202700 Salix brachista HOM05D001431 ORTHO05D001268 7.7e-09 63.9 92 41.3
Lsat_1_v5_gn_8_63180 Lactuca sativa HOM05D001431 ORTHO05D001268 1.0e-08 63.5 89 38.2
Atru.chr7.2499 Acer truncatum HOM05D001431 ORTHO05D001268 1.3e-08 63.2 88 43.2
TWI34G1362 Tripterygium wilfordii HOM05D001431 ORTHO05D001268 1.3e-08 63.2 93 44.1
Cpa.g.sc187.26 Carica papaya HOM05D001431 ORTHO05D001268 1.7e-08 62.8 68 48.5
MELO3C010262.2 Cucumis melo HOM05D001431 ORTHO05D001268 2.2e-08 62.4 92 40.2
CsaV3_1G028510 Cucumis sativus L. HOM05D001431 ORTHO05D001268 2.2e-08 62.4 92 40.2
Peaxi162Scf01184g00110 Petunia axillaris HOM05D001431 ORTHO05D001268 2.2e-08 62.4 82 41.5
QL02p091314 Quercus lobata HOM05D001431 ORTHO05D001268 5.0e-08 61.2 91 40.7
Cfa013105 Carpinus fangiana HOM05D024967 ORTHO05D001268 1.1e-07 60.1 83 47.0
Duzib168G0421 Durio zibethinus HOM05D001431 ORTHO05D001268 1.1e-07 60.1 90 43.3
HanXRQChr05g0137941 Helianthus annuus HOM05D001431 ORTHO05D001268 1.1e-07 60.1 98 40.8
HanXRQChr06g0181721 Helianthus annuus HOM05D001431 ORTHO05D001268 1.5e-07 59.7 96 38.5
Solyc07g007130.1 Solanum lycopersicum HOM05D001431 ORTHO05D001268 1.5e-07 59.7 86 39.5
Sopen07g003180 Solanum pennellii HOM05D001431 ORTHO05D001268 1.5e-07 59.7 86 39.5
Haze_19319 Corylus avellana HOM05D001431 ORTHO05D001268 1.9e-07 59.3 68 47.1
Thecc.09G141800 Theobroma cacao HOM05D001431 ORTHO05D001268 1.9e-07 59.3 90 41.1
TAR383G0017 Trochodendron aralioides HOM05D001431 ORTHO05D001268 1.9e-07 59.3 72 47.2
Haze_21471 Corylus avellana HOM05D024967 ORTHO05D001268 2.5e-07 58.9 84 44.0
Peaxi162Scf00108g00002 Petunia axillaris HOM05D001431 ORTHO05D001268 2.5e-07 58.9 82 41.5
QL02p091284 Quercus lobata HOM05D001431 ORTHO05D001268 2.5e-07 58.9 93 37.6
Nitab4.5_0011752g0010 Nicotiana tabacum HOM05D001431 ORTHO05D001268 3.2e-07 58.5 91 40.7
PGSC0003DMG400030698 Solanum tuberosum HOM05D001431 ORTHO05D001268 3.2e-07 58.5 86 39.5
MBI15_g10642_MAGBIO Magnolia biondii HOM05D001431 ORTHO05D001268 4.2e-07 58.2 89 41.6
Hma1.2p1_0949F.1_g240600 Hydrangea macrophylla HOM05D001431 ORTHO05D001268 7.2e-07 57.4 91 44.0
MD15G1130700 Malus domestica HOM05D001431 ORTHO05D001268 7.2e-07 57.4 70 47.1
Peaxi162Scf01184g00111 Petunia axillaris HOM05D001431 ORTHO05D001268 7.2e-07 57.4 82 40.2
Manes.14G138600 Manihot esculenta HOM05D001431 ORTHO05D001268 9.4e-07 57.0 98 36.7
Oeu042713.1 Olea europaea HOM05D001431 ORTHO05D001268 9.4e-07 57.0 87 41.4
THA.LOC104814117 Tarenaya hassleriana HOM05D001431 ORTHO05D001268 1.2e-06 56.6 92 38.0
Haze_21459 Corylus avellana HOM05D024967 ORTHO05D001268 1.6e-06 56.2 71 46.5
ECA236G0145 Erigeron canadensis HOM05D001431 ORTHO05D001268 1.6e-06 56.2 101 36.6
FAN20G3221 Fragaria x ananassa HOM05D001431 ORTHO05D001268 1.6e-06 56.2 85 40.0
Hma1.2p1_1784F.1_g302160 Hydrangea macrophylla HOM05D001431 ORTHO05D001268 1.6e-06 56.2 91 42.9
Solyc03g114130.1 Solanum lycopersicum HOM05D001431 ORTHO05D001268 1.6e-06 56.2 95 35.8
Sopen03g033190 Solanum pennellii HOM05D001431 ORTHO05D001268 1.6e-06 56.2 95 35.8
FvH4_2g28310 Fragaria vesca HOM05D001431 ORTHO05D001268 2.1e-06 55.8 85 40.0
Glyma.06G065400 Glycine max HOM05D030354 ORTHO05D029741 2.1e-06 55.8 93 40.9
TAR626G1912 Trochodendron aralioides HOM05D001431 ORTHO05D001268 2.7e-06 55.5 82 46.3
PGR142G0349 Punica granatum HOM05D001431 ORTHO05D001268 3.6e-06 55.1 87 40.2
Aa31LG11G14610 Aethionema arabicum HOM05D001101 ORTHO05D000893 4.7e-06 54.7 72 38.9
CiPaw.07G227000 Carya illinoinensis HOM05D001431 ORTHO05D001268 4.7e-06 54.7 91 41.8
RhsimUnG0052200 Rhododendron simsii HOM05D064320 ORTHO05D001268 6.1e-06 54.3 88 42.0
RhsimUnG0165500 Rhododendron simsii HOM05D064320 ORTHO05D001268 6.1e-06 54.3 88 42.0
RcHm_v2.0_Chr2g0086671 Rosa chinensis HOM05D001431 ORTHO05D001268 6.1e-06 54.3 97 36.1
ATR0580G431 Amborella trichopoda HOM05D001431 ORTHO05D001268 8.0e-06 53.9 88 36.4
FAN27G3025 Fragaria x ananassa HOM05D001431 ORTHO05D001268 8.0e-06 53.9 85 38.8
THA.LOC104802406 Tarenaya hassleriana HOM05D001431 ORTHO05D001268 8.0e-06 53.9 85 40.0


User provided reference genes

Program Settings