Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029429 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-92 342.4 171 100.0
CSS0016107 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-29 133.3 122 58.2
CSS0046748 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-28 128.6 121 52.9
CSS0025416 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.3e-26 120.9 122 54.9
Rhsim02G0101600 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.6e-22 110.2 125 49.6
Rhsim05G0062600 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.6e-22 110.2 123 46.3
CSS0003386 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-21 105.9 127 47.2
CSS0007773 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-21 105.9 111 50.5
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.6e-20 102.8 123 45.5
Rhsim09G0019300 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.7e-19 100.1 129 44.2
CSS0049708 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.5e-18 95.1 109 45.9
Lju225C0G8 Lonicera japonica HOM05D000002 ORTHO05D000001 3.0e-16 89.4 111 43.2
Lju225C4G4 Lonicera japonica HOM05D000002 ORTHO05D000001 3.0e-16 89.4 126 41.3
CSS0045870 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-14 83.6 104 42.3
Rhsim06G0125700 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.2e-14 81.6 131 39.7
CSS0039702 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-13 80.9 94 46.8
CSS0034941 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-13 80.1 103 39.8
CSS0014430 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-12 75.9 129 36.4
MSTRG.19383 Avicennia marina HOM05D000073 ORTHO05D000033 1.7e-11 73.6 129 40.3
CSS0021158 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-09 67.4 70 51.4
CAN.G447.8 Capsicum annuum HOM05D000002 ORTHO05D000001 7.9e-09 64.7 82 45.1
Migut.D01554 Erythranthe guttata HOM05D000002 ORTHO05D000001 6.7e-08 61.6 148 32.4
Lj2P1186T25 Lonicera japonica HOM05D000002 ORTHO05D000001 1.9e-07 60.1 50 60.0
Psat1g154000 Pisum sativum HOM05D000002 ORTHO05D000001 1.3e-06 57.4 118 28.0
Psat7g220520 Pisum sativum HOM05D000002 ORTHO05D000001 1.6e-06 57.0 103 29.1
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 6.3e-06 55.1 105 31.4
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 6.3e-06 55.1 105 31.4


User provided reference genes

Program Settings