Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029425 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 2.4e-78 295.4 147 100.0
CSS0013406 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 4.6e-66 254.6 145 87.6
CSS0032344 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 6.0e-66 254.2 145 87.6
Rhsim08G0115200 Rhododendron simsii HOM05D007743 ORTHO05D004645 1.4e-30 136.7 142 52.1
Rhsim01G0124200 Rhododendron simsii HOM05D000422 ORTHO05D004645 4.1e-22 108.6 137 46.7
Hma1.2p1_0498F.1_g166640 Hydrangea macrophylla HOM05D007743 ORTHO05D004645 3.1e-14 82.4 116 44.0
FAN09G3614 Fragaria x ananassa HOM05D007743 ORTHO05D004645 8.6e-12 74.3 133 34.6
FvH4_2g02401 Fragaria vesca HOM05D007743 ORTHO05D010219 1.1e-11 73.9 140 34.3
FAN09G0033 Fragaria x ananassa HOM05D007743 ORTHO05D004645 4.3e-11 72.0 140 33.6
FAN18G2940 Fragaria x ananassa HOM05D007743 ORTHO05D004645 4.3e-11 72.0 140 33.6
FAN05G2464 Fragaria x ananassa HOM05D007743 ORTHO05D004645 5.6e-11 71.6 140 33.6
FAN08G2536 Fragaria x ananassa HOM05D007743 ORTHO05D004645 5.6e-11 71.6 140 33.6
FAN08G2971 Fragaria x ananassa HOM05D007743 ORTHO05D004645 5.6e-11 71.6 140 33.6
FAN18G3916 Fragaria x ananassa HOM05D007743 ORTHO05D004645 5.6e-11 71.6 140 33.6
FAN26G1586 Fragaria x ananassa HOM05D007743 ORTHO05D004645 5.6e-11 71.6 140 33.6
FAN26G1874 Fragaria x ananassa HOM05D007743 ORTHO05D004645 5.6e-11 71.6 140 33.6
FAN09G4280 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.2e-10 70.5 140 33.6
RcHm_v2.0_Chr6g0296991 Rosa chinensis HOM05D007743 ORTHO05D004645 1.2e-10 70.5 101 39.6
FvH4_1g29461 Fragaria vesca HOM05D007743 ORTHO05D010219 6.1e-10 68.2 105 38.1
FvH4_2g00671 Fragaria vesca HOM05D007743 ORTHO05D004645 6.1e-10 68.2 127 33.9
Atru.chr10.1040 Acer truncatum HOM05D007592 ORTHO05D004645 5.2e-09 65.1 135 28.9
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 5.2e-09 65.1 52 59.6
Atru.chr8.1335 Acer truncatum HOM05D007592 ORTHO05D004645 2.6e-08 62.8 123 34.1
AL2G23940 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 5.8e-08 61.6 144 29.9
Atru.chr6.1370 Acer truncatum HOM05D007592 ORTHO05D004645 1.3e-07 60.5 135 30.4
Ciclev10033648m.g Citrus clementina HOM05D007592 ORTHO05D004645 1.7e-07 60.1 137 32.1
Ciclev10016612m.g Citrus clementina HOM05D007592 ORTHO05D004645 4.9e-07 58.5 135 28.9
Ciclev10023655m.g Citrus clementina HOM05D007592 ORTHO05D004645 8.3e-07 57.8 135 28.9
AT4G10230 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 1.1e-06 57.4 136 29.4
AT1G24380 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 1.9e-06 56.6 136 29.4
BraA09t38299Z Brassica rapa HOM05D007592 ORTHO05D004645 3.2e-06 55.8 155 26.5
C06p21250 Brassica napus HOM05D007592 ORTHO05D004645 4.1e-06 55.5 155 26.5
DCAR_018612 Daucus carota HOM05D007592 ORTHO05D004645 4.1e-06 55.5 134 27.6
CANSAT64G2577 Cannabis sativa HOM05D007592 ORTHO05D004645 7.0e-06 54.7 145 29.0
FAN19G3162 Fragaria x ananassa HOM05D007743 ORTHO05D004645 7.0e-06 54.7 100 34.0
DCAR_001490 Daucus carota HOM05D007592 ORTHO05D004645 9.2e-06 54.3 138 26.8


User provided reference genes

Program Settings