Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 6.1e-186 654.1 343 100.0
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 4.5e-181 637.9 343 97.7
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 1.8e-137 493.0 342 76.3
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 2.5e-123 446.0 342 71.1
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 9.6e-123 444.1 341 71.0
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 3.7e-122 442.2 343 69.4
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 1.3e-119 433.7 347 68.9
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 2.2e-119 433.0 347 68.9
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 7.1e-118 427.9 348 67.5
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 1.3e-116 423.7 328 72.0
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 1.3e-116 423.7 346 66.5
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 3.9e-116 422.2 343 66.2
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 6.7e-116 421.4 348 67.5
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 1.1e-115 420.6 344 67.7
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 1.9e-115 419.9 348 66.7
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 1.6e-114 416.8 344 67.2
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 8.2e-114 414.5 343 65.3
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 2.4e-113 412.9 344 66.3
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 4.0e-113 412.1 343 65.0
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 5.3e-113 411.8 333 67.9
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 6.9e-113 411.4 345 64.6
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 1.5e-112 410.2 336 65.5
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 7.6e-112 407.9 320 68.4
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 4.9e-111 405.2 346 64.2
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 4.9e-111 405.2 345 66.1
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 1.9e-110 403.3 346 64.2
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 2.5e-110 402.9 345 65.5
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 3.2e-110 402.5 295 71.9
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 3.2e-110 402.5 351 63.0
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 3.2e-110 402.5 339 64.9
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 1.2e-109 400.6 314 66.6
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 1.2e-109 400.6 314 66.6
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 2.7e-109 399.4 339 63.7
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 4.6e-109 398.7 345 64.3
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 6.0e-109 398.3 343 64.4
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 7.9e-109 397.9 344 64.2
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 7.9e-109 397.9 343 64.1
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 1.8e-108 396.7 348 62.1
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 5.1e-108 395.2 317 66.9
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 6.7e-108 394.8 335 64.5
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 6.7e-108 394.8 335 64.2
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 1.3e-106 390.6 344 61.3
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 1.6e-106 390.2 340 61.8
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 2.2e-106 389.8 345 59.7
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 3.7e-106 389.0 344 60.5
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 4.8e-106 388.7 345 62.0
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 8.2e-106 387.9 346 61.8
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 1.8e-105 386.7 339 64.6
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 2.4e-105 386.3 351 62.1
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 4.1e-105 385.6 328 65.5
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 5.3e-105 385.2 345 60.9
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 9.0e-105 384.4 351 62.4
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 2.6e-104 382.9 335 62.4
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 3.4e-104 382.5 343 61.2
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 4.5e-104 382.1 345 60.0
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 5.9e-104 381.7 339 63.7
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 1.0e-103 380.9 348 60.1
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 1.3e-103 380.6 346 62.4
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 1.3e-103 380.6 334 63.2
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 3.8e-103 379.0 283 67.8
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 1.2e-101 374.0 346 58.4
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 1.6e-101 373.6 279 67.4
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 1.0e-100 370.9 345 60.6
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 8.8e-100 367.9 346 58.1
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 4.3e-99 365.5 274 71.9
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 3.1e-97 359.4 351 57.8
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 6.9e-97 358.2 336 61.9
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 3.8e-95 352.4 280 65.4
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 6.5e-95 351.7 312 63.1
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 9.4e-94 347.8 281 63.7
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 2.6e-91 339.7 276 63.0
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 1.8e-89 333.6 345 58.0
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 1.2e-88 330.9 345 57.4
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 2.0e-88 330.1 345 57.1
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 4.5e-88 328.9 345 56.5
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 1.7e-87 327.0 344 56.7
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 1.7e-87 327.0 340 58.2
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 3.8e-87 325.9 343 53.9
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 6.5e-87 325.1 349 55.9
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 1.9e-86 323.6 345 56.5
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 2.5e-86 323.2 349 56.4
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 9.4e-86 321.2 340 57.4
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 9.4e-86 321.2 340 57.4
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 1.0e-84 317.8 279 64.5
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 2.3e-84 316.6 346 55.5
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 1.3e-82 310.8 318 58.8
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 7.7e-80 301.6 348 54.3
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 4.4e-75 285.8 316 50.0
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 7.5e-75 285.0 206 71.8
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 1.6e-61 240.7 184 63.6
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 1.6e-61 240.7 310 44.2
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 7.0e-57 225.3 306 45.8
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 9.5e-54 214.9 133 76.7
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 2.1e-53 213.8 207 58.5
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 1.1e-49 201.4 121 81.8
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 3.0e-47 193.4 271 38.7
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 7.1e-33 145.6 273 33.7
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 4.6e-32 142.9 254 42.9
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 5.1e-31 139.4 275 34.2
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 1.1e-30 138.3 115 66.1
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 4.0e-28 129.8 215 44.7
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 4.9e-26 122.9 135 51.1
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 2.4e-25 120.6 115 55.7
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 9.9e-19 98.6 265 28.3
BcaB02g11442 Brassica carinata HOM05D007317 ORTHO05D009299 5.3e-12 76.3 107 39.3
Cre08.g369000 Chlamydomonas reinhardtii HOM05D007317 ORTHO05D009299 3.2e-09 67.0 147 27.9


User provided reference genes

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