Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029387 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 4.8e-38 160.6 77 100.0
CSS0003933 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.7e-35 152.1 77 93.5
CSS0013775 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.9e-24 114.4 78 70.5
Actinidia09680 Actinidia chinensis HOM05D000034 ORTHO05D000277 1.9e-23 112.1 76 65.8
Actinidia17901 Actinidia chinensis HOM05D000034 ORTHO05D000277 3.3e-23 111.3 76 67.1
Rhsim02G0110600 Rhododendron simsii HOM05D000034 ORTHO05D000277 4.8e-22 107.5 76 65.8
Actinidia15598 Actinidia chinensis HOM05D000034 ORTHO05D000277 1.2e-20 102.8 70 65.7
vmacro15090 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.6e-20 101.7 76 60.5
Rhsim10G0097900 Rhododendron simsii HOM05D000034 ORTHO05D000277 7.6e-20 100.1 76 61.8
CSS0010302 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.0e-19 99.8 67 67.2
CSS0015669 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.0e-19 99.8 67 67.2
CSS0024362 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.0e-19 99.8 67 67.2
CSS0033072 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.3e-19 99.4 67 67.2
CSS0016960 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.7e-19 99.0 67 67.2
vmacro06986 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.2e-19 98.6 76 61.8
CSS0042392 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 5.5e-18 94.0 67 64.2
Rhsim05G0104200 Rhododendron simsii HOM05D000034 ORTHO05D000277 7.2e-18 93.6 72 59.7
CSS0031455 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.2e-17 92.8 67 62.7
CSS0008044 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.6e-17 92.4 67 65.7
CSS0036595 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 6.1e-17 90.5 67 62.7
CSS0040966 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 7.9e-17 90.1 53 73.6
Dinv20295 Davidia involucrata HOM05D002072 ORTHO05D001634 3.7e-14 81.3 64 53.1
Hma1.2p1_0746F.1_g212360 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 6.3e-14 80.5 70 52.9
Hma1.2p1_0846F.1_g227800 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 6.3e-14 80.5 70 52.9
Dinv08467 Davidia involucrata HOM05D000034 ORTHO05D000277 8.2e-14 80.1 56 57.1
Hma1.2p1_0127F.1_g059736 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.1e-13 79.7 59 57.6
Hma1.2p1_0286F.1_g113985 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.1e-13 79.7 59 57.6
Hma1.2p1_0035F.1_g021910 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.4e-13 79.3 70 52.9
Dinv18323 Davidia involucrata HOM05D000034 ORTHO05D000277 1.8e-13 79.0 62 51.6
Hma1.2p1_0276F.1_g111440 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.1e-13 78.2 59 57.6
Actinidia26110 Actinidia chinensis HOM05D000034 ORTHO05D000277 4.1e-13 77.8 68 50.0
CSS0047009 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.1e-13 77.8 59 54.2
Hma1.2p1_0354F.1_g133450 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.1e-13 77.8 70 51.4
CSS0036649 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 6.9e-13 77.0 59 54.2
CSS0021233 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.5e-12 75.9 59 54.2
Actinidia35710 Actinidia chinensis HOM05D000034 ORTHO05D000277 2.0e-12 75.5 54 64.8
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 2.6e-12 75.1 68 48.5
CSS0028844 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.6e-12 75.1 59 52.5
vmacro03217 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.6e-12 75.1 62 58.1
Actinidia32180 Actinidia chinensis HOM05D000034 ORTHO05D000277 3.4e-12 74.7 44 72.7
Actinidia19902 Actinidia chinensis HOM05D000034 ORTHO05D000277 4.5e-12 74.3 68 51.5
Hma1.2p1_0489F.1_g164000 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.5e-12 74.3 69 47.8
Actinidia29814 Actinidia chinensis HOM05D004347 ORTHO05D005270 7.7e-12 73.6 46 71.7
Actinidia27570 Actinidia chinensis HOM05D005831 ORTHO05D007007 1.3e-11 72.8 54 66.7
Actinidia03627 Actinidia chinensis HOM05D000034 ORTHO05D000277 2.2e-11 72.0 74 45.9
Actinidia06690 Actinidia chinensis HOM05D000034 ORTHO05D000277 2.2e-11 72.0 74 45.9
Actinidia03349 Actinidia chinensis HOM05D000034 ORTHO05D000277 5.0e-11 70.9 52 61.5
Dinv34343 Davidia involucrata HOM05D000034 ORTHO05D000277 5.0e-11 70.9 53 54.7
Hma1.2p1_0664F.1_g199003 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.5e-11 70.5 69 46.4
CSS0037415 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.1e-10 69.7 59 49.2
Hma1.2p1_0423F.1_g150230 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.1e-10 69.7 69 47.8
Hma1.2p1_2244F.1_g317920 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.1e-10 69.7 69 46.4
vmacro02162 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 1.1e-10 69.7 70 50.0
vmacro04835 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 1.1e-10 69.7 70 50.0
Hma1.2p1_0587F.1_g184020 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.4e-10 69.3 69 49.3
Hma1.2p1_0672F.1_g201070 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.4e-10 69.3 69 47.8
CANSAT11G0741 Cannabis sativa HOM05D000034 ORTHO05D000277 1.9e-10 68.9 74 48.6
Hma1.2p1_1184F.1_g264860 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 1.9e-10 68.9 69 46.4
Hma1.2p1_1553F.1_g290400 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.9e-10 68.9 60 53.3
Actinidia16895 Actinidia chinensis HOM05D000034 ORTHO05D000277 2.5e-10 68.6 52 55.8
Dinv06216 Davidia involucrata HOM05D000034 ORTHO05D000277 2.5e-10 68.6 62 48.4
Hma1.2p1_0203F.1_g086660 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.5e-10 68.6 69 49.3
Hma1.2p1_0207F.1_g087800 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.5e-10 68.6 69 46.4
Hma1.2p1_2373F.1_g320860 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.5e-10 68.6 69 46.4
Dinv02446 Davidia involucrata HOM05D000034 ORTHO05D000277 3.2e-10 68.2 56 50.0
vmacro11101 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 3.2e-10 68.2 52 59.6
vmacro17940 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 3.2e-10 68.2 69 44.9
vmacro19656 Vaccinium macrocarpon HOM05D009692 ORTHO05D011920 3.2e-10 68.2 71 47.9
vmacro14063 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 4.2e-10 67.8 61 47.5
Hma1.2p1_0633F.1_g192570 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.2e-10 67.0 72 44.4
CANSAT25G0805 Cannabis sativa HOM05D000034 ORTHO05D000277 9.4e-10 66.6 74 47.3
CANSAT64G1464 Cannabis sativa HOM05D000034 ORTHO05D000277 9.4e-10 66.6 57 52.6
Hma1.2p1_0046F.1_g026820 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.1e-09 65.5 69 44.9
CANSAT21G0305 Cannabis sativa HOM05D000034 ORTHO05D000277 2.7e-09 65.1 74 47.3
Hma1.2p1_0165F.1_g073390 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.7e-09 65.1 70 45.7
vmacro10669 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.7e-09 65.1 52 55.8
Hma1.2p1_0232F.1_g097920 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.6e-09 64.7 61 50.8
Hma1.2p1_0601F.1_g187150 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.6e-09 64.7 69 44.9
Hma1.2p1_2228F.1_g317520 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.6e-09 64.3 62 50.0
vmacro00535 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 6.1e-09 63.9 52 59.6
vmacro22639 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 7.9e-09 63.5 63 47.6
Dinv26541 Davidia involucrata HOM05D000034 ORTHO05D000277 1.4e-08 62.8 66 42.4
Lj5g0001459 Lotus japonicus HOM05D000034 ORTHO05D000277 1.4e-08 62.8 74 41.9
Lj5g0006139 Lotus japonicus HOM05D000034 ORTHO05D000277 1.4e-08 62.8 74 41.9
Nn1g01000 Nelumbo nucifera HOM05D001651 ORTHO05D000277 1.4e-08 62.8 56 48.2
Rhsim01G0203500 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.4e-08 62.8 50 58.0
Hma1.2p1_0081F.1_g042220 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-08 62.4 69 44.9
Hma1.2p1_0698F.1_g205360 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-08 62.4 58 50.0
Lj1g0021510 Lotus japonicus HOM05D000034 ORTHO05D000277 1.8e-08 62.4 74 41.9
LjContig00357g0019659 Lotus japonicus HOM05D000034 ORTHO05D000277 1.8e-08 62.4 74 41.9
RhsimUnG0197200 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.8e-08 62.4 84 40.5
Hma1.2p1_0084F.1_g043280 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.3e-08 62.0 75 42.7
vmacro05435 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.3e-08 62.0 50 58.0
Actinidia04196 Actinidia chinensis HOM05D000034 ORTHO05D000277 3.0e-08 61.6 73 41.1
Dinv16912 Davidia involucrata HOM05D012673 ORTHO05D000277 3.0e-08 61.6 44 54.5
Rhsim05G0124900 Rhododendron simsii HOM05D000034 ORTHO05D000277 3.0e-08 61.6 52 53.8
Rhsim09G0193500 Rhododendron simsii HOM05D000034 ORTHO05D000277 3.0e-08 61.6 50 56.0
Actinidia06423 Actinidia chinensis HOM05D000034 ORTHO05D000277 3.9e-08 61.2 73 43.8
HanXRQChr17g0539991 Helianthus annuus HOM05D066242 ORTHO05D000277 3.9e-08 61.2 76 40.8
Hma1.2p1_0022F.1_g014790 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.9e-08 61.2 70 44.3
Hma1.2p1_0186F.1_g081700 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.9e-08 61.2 50 52.0
CSS0026213 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 6.7e-08 60.5 59 42.4
vmacro08876 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 6.7e-08 60.5 76 39.5
Dinv36440 Davidia involucrata HOM05D012673 ORTHO05D000277 8.8e-08 60.1 56 46.4
Hma1.2p1_0890F.1_g233020 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.8e-08 60.1 56 44.6
Rhsim02G0154600 Rhododendron simsii HOM05D000034 ORTHO05D000277 8.8e-08 60.1 84 39.3
Migut.L00416 Erythranthe guttata HOM05D000034 ORTHO05D000277 1.1e-07 59.7 55 47.3
SGA_v2.0_scaffold3G01632 Striga asiatica HOM05D009666 ORTHO05D000277 1.1e-07 59.7 76 38.2
Atru.chr4.508 Acer truncatum HOM05D000034 ORTHO05D000277 1.5e-07 59.3 63 42.9
SGA_v2.0_scaffold105G30384 Striga asiatica HOM05D000034 ORTHO05D000277 1.5e-07 59.3 76 38.2
ECA246G1567 Erigeron canadensis HOM05D000034 ORTHO05D000277 2.0e-07 58.9 76 39.5
SGA_v2.0_scaffold6G03411 Striga asiatica HOM05D000034 ORTHO05D000277 2.6e-07 58.5 61 42.6
Lj1g0019892 Lotus japonicus HOM05D000034 ORTHO05D000277 3.3e-07 58.2 56 46.4
Rhsim03G0108500 Rhododendron simsii HOM05D000034 ORTHO05D000277 3.3e-07 58.2 91 37.4
Rhsim07G0014400 Rhododendron simsii HOM05D000034 ORTHO05D000277 3.3e-07 58.2 91 37.4
Actinidia34500 Actinidia chinensis HOM05D002514 ORTHO05D002761 4.4e-07 57.8 60 46.7
DCAR_018898 Daucus carota HOM05D001651 ORTHO05D000277 4.4e-07 57.8 66 40.9
Atru.chr12.953 Acer truncatum HOM05D001651 ORTHO05D000277 5.7e-07 57.4 64 46.9
Atru.chr2.3198 Acer truncatum HOM05D001651 ORTHO05D000277 5.7e-07 57.4 64 46.9
COL.COLO4_19702 Corchorus olitorius HOM05D000034 ORTHO05D000277 5.7e-07 57.4 68 36.8
FvH4_7g00320 Fragaria vesca HOM05D000034 ORTHO05D000277 5.7e-07 57.4 72 40.3
Hma1.2p1_0325F.1_g126110 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.7e-07 57.4 75 40.0
Solyc06g075675.1 Solanum lycopersicum HOM05D008774 ORTHO05D000277 5.7e-07 57.4 62 41.9
Sopen01g043080 Solanum pennellii HOM05D008774 ORTHO05D010951 5.7e-07 57.4 62 41.9
Sopen02g014140 Solanum pennellii HOM05D000034 ORTHO05D000037 5.7e-07 57.4 62 41.9
Sopen07g025790 Solanum pennellii HOM05D000034 ORTHO05D000037 5.7e-07 57.4 62 41.9
Sopen09g033840 Solanum pennellii HOM05D000034 ORTHO05D000037 5.7e-07 57.4 62 41.9
SGA_v2.0_scaffold123G33397 Striga asiatica HOM05D000034 ORTHO05D000277 5.7e-07 57.4 43 55.8
COL.COLO4_07669 Corchorus olitorius HOM05D000034 ORTHO05D000277 7.4e-07 57.0 77 41.6
Hma1.2p1_0388F.1_g142330 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.4e-07 57.0 75 40.0
Actinidia17688 Actinidia chinensis HOM05D000034 ORTHO05D000277 9.7e-07 56.6 76 42.1
Rhsim02G0247200 Rhododendron simsii HOM05D000034 ORTHO05D000277 9.7e-07 56.6 81 38.3
SGA_v2.0_scaffold103G30052 Striga asiatica HOM05D000034 ORTHO05D000277 9.7e-07 56.6 55 45.5
SGA_v2.0_scaffold235G43663 Striga asiatica HOM05D009666 ORTHO05D000277 9.7e-07 56.6 72 41.7
Dinv10440 Davidia involucrata HOM05D000034 ORTHO05D000277 1.3e-06 56.2 47 48.9
Hma1.2p1_0896F.1_g233910 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.3e-06 56.2 55 41.8
Hma1.2p1_1761F.1_g301340 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.3e-06 56.2 55 41.8
DCAR_011368 Daucus carota HOM05D001651 ORTHO05D000277 1.7e-06 55.8 62 40.3
DCAR_011369 Daucus carota HOM05D001651 ORTHO05D000277 1.7e-06 55.8 62 40.3
FAN22G1985 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.7e-06 55.8 52 48.1
Solyc10g017753.1 Solanum lycopersicum HOM05D008774 ORTHO05D000277 1.7e-06 55.8 70 35.7
PGSC0003DMG400027866 Solanum tuberosum HOM05D008774 ORTHO05D010951 1.7e-06 55.8 64 34.4
COL.COLO4_20957 Corchorus olitorius HOM05D000034 ORTHO05D000277 2.2e-06 55.5 79 39.2
FAN09G3387 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.2e-06 55.5 64 40.6
Hma1.2p1_0417F.1_g148940 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 2.2e-06 55.5 56 39.3
SGA_v2.0_scaffold154G37147 Striga asiatica HOM05D000034 ORTHO05D000277 2.2e-06 55.5 58 41.4
SGA_v2.0_scaffold221G42759 Striga asiatica HOM05D009666 ORTHO05D000277 2.2e-06 55.5 57 43.9
SGA_v2.0_scaffold3145G54282 Striga asiatica HOM05D009666 ORTHO05D000277 2.2e-06 55.5 57 43.9
vmacro11711 Vaccinium macrocarpon HOM05D009692 ORTHO05D011920 2.2e-06 55.5 52 53.8
FvH4_1g22560 Fragaria vesca HOM05D000034 ORTHO05D000037 2.8e-06 55.1 72 40.3
Hma1.2p1_0563F.1_g179070 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 2.8e-06 55.1 48 43.8
PGSC0003DMG400030305 Solanum tuberosum HOM05D008774 ORTHO05D010951 2.8e-06 55.1 63 34.9
SGA_v2.0_scaffold19G08712 Striga asiatica HOM05D009707 ORTHO05D010215 2.8e-06 55.1 72 40.3
SGA_v2.0_scaffold380G50359 Striga asiatica HOM05D009707 ORTHO05D010215 2.8e-06 55.1 72 40.3
Migut.F01547 Erythranthe guttata HOM05D000034 ORTHO05D000277 3.7e-06 54.7 68 39.7
Hma1.2p1_0189F.1_g082820 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.7e-06 54.7 55 40.0
Hma1.2p1_2250F.1_g318040 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.7e-06 54.7 56 41.1
PGSC0003DMG400001885 Solanum tuberosum HOM05D008774 ORTHO05D010951 3.7e-06 54.7 63 36.5
CSS0008534 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 4.8e-06 54.3 78 43.6
DCAR_009785 Daucus carota HOM05D001651 ORTHO05D000277 4.8e-06 54.3 54 42.6
DCAR_015799 Daucus carota HOM05D001651 ORTHO05D000277 4.8e-06 54.3 54 42.6
Atru.chr6.1585 Acer truncatum HOM05D000034 ORTHO05D000277 6.3e-06 53.9 76 36.8
FAN25G0666 Fragaria x ananassa HOM05D000034 ORTHO05D000277 6.3e-06 53.9 64 39.1
FAN25G0710 Fragaria x ananassa HOM05D000034 ORTHO05D000277 6.3e-06 53.9 64 39.1
Hma1.2p1_0442F.1_g153940 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 6.3e-06 53.9 56 41.1
Rhsim05G0045400 Rhododendron simsii HOM05D000034 ORTHO05D000277 6.3e-06 53.9 74 41.9
PGSC0003DMG400000959 Solanum tuberosum HOM05D008774 ORTHO05D010951 6.3e-06 53.9 70 32.9
vmacro08892 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 6.3e-06 53.9 60 45.0
FAN28G1917 Fragaria x ananassa HOM05D000034 ORTHO05D000277 8.2e-06 53.5 64 39.1
Hma1.2p1_0026F.1_g016610 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.2e-06 53.5 55 38.2
Prupe.4G257700 Prunus persica HOM05D000034 ORTHO05D000277 8.2e-06 53.5 68 38.2
TAR629G1231 Trochodendron aralioides HOM05D000665 ORTHO05D000140 8.2e-06 53.5 62 38.7
vmacro20771 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 8.2e-06 53.5 48 50.0


User provided reference genes

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