Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029340 Camellia sinensis var. sinensis HOM05D011823 ORTHO05D000818 3.5e-181 638.3 347 100.0
Dinv40739 Davidia involucrata HOM05D005684 ORTHO05D007427 5.5e-41 172.6 180 47.8
Atru.chr2.2937 Acer truncatum HOM05D002077 ORTHO05D000818 2.8e-29 133.7 260 29.2
Aqoxy7G02866 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 1.3e-26 124.8 259 32.4
Aqoxy7G02867 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 1.8e-23 114.4 251 28.7
COL.COLO4_16618 Corchorus olitorius HOM05D002077 ORTHO05D000818 3.9e-23 113.2 251 29.9
COL.COLO4_36569 Corchorus olitorius HOM05D002077 ORTHO05D000818 1.5e-22 111.3 260 30.8
Atru.chr2.2914 Acer truncatum HOM05D002077 ORTHO05D000818 2.0e-22 110.9 183 32.2
Aqoxy5G01533 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 2.4e-20 104.0 267 28.5
Aqoxy2G00158 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 1.5e-19 101.3 255 27.8
Cfa000242 Carpinus fangiana HOM05D011823 ORTHO05D014382 1.3e-18 98.2 239 26.8
COL.COLO4_09460 Corchorus olitorius HOM05D036706 ORTHO05D000818 7.2e-17 92.4 183 32.2
Aqoxy2G00144 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 2.7e-16 90.5 263 26.6
Aqoxy5G03957 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 2.7e-16 90.5 256 28.5
TAR627G0443 Trochodendron aralioides HOM05D002077 ORTHO05D000818 1.8e-15 87.8 163 30.7
QL09p014520 Quercus lobata HOM05D002077 ORTHO05D000818 1.5e-14 84.7 256 29.7
Migut.F01126 Erythranthe guttata HOM05D002077 ORTHO05D000818 2.6e-14 84.0 247 28.3
Os10g0502900 Oryza sativa ssp. japonica HOM05D002077 ORTHO05D000818 5.7e-14 82.8 247 29.1
Dinv35206 Davidia involucrata HOM05D002077 ORTHO05D000818 2.2e-13 80.9 257 28.4
ECA232G3548 Erigeron canadensis HOM05D002077 ORTHO05D000818 4.8e-13 79.7 260 28.5
Oeu021781.1 Olea europaea HOM05D002077 ORTHO05D000818 8.2e-13 79.0 254 28.0
Aqoxy3G02725 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 1.1e-12 78.6 251 27.5
DCAR_009358 Daucus carota HOM05D002077 ORTHO05D000818 1.1e-12 78.6 252 26.6
SGA_v2.0_scaffold10G05344 Striga asiatica HOM05D002077 ORTHO05D000818 1.4e-12 78.2 250 27.2
TAR636G1697 Trochodendron aralioides HOM05D002077 ORTHO05D000818 1.8e-12 77.8 262 29.4
COL.COLO4_32276 Corchorus olitorius HOM05D037256 ORTHO05D000818 2.4e-12 77.4 185 28.1
Rhsim13G0155700 Rhododendron simsii HOM05D011823 ORTHO05D014382 2.4e-12 77.4 278 26.6
Sp5g15070 Schrenkiella parvula HOM05D002077 ORTHO05D000818 2.4e-12 77.4 251 25.9
Aqoxy4G02851 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 4.1e-12 76.6 254 24.8
HanXRQChr15g0495591 Helianthus annuus HOM05D002077 ORTHO05D000818 4.1e-12 76.6 253 29.6
Thecc.07G038400 Theobroma cacao HOM05D002077 ORTHO05D000818 5.3e-12 76.3 254 24.4
Zm00001eb044180 Zea mays HOM05D002077 ORTHO05D000818 5.3e-12 76.3 241 27.4
Glyma.20G157500 Glycine max HOM05D002077 ORTHO05D000818 7.0e-12 75.9 251 29.5
CSS0033824 Camellia sinensis var. sinensis HOM05D011823 ORTHO05D014382 9.1e-12 75.5 251 27.1
Glyma.10G236900 Glycine max HOM05D002077 ORTHO05D000818 1.2e-11 75.1 251 29.5
PSO063G0361 Papaver somniferum HOM05D002077 ORTHO05D000818 2.0e-11 74.3 250 24.4
Phvul.007G069000 Phaseolus vulgaris HOM05D002077 ORTHO05D000818 2.0e-11 74.3 251 29.1
VMungo0720G0161 Vigna mungo HOM05D002077 ORTHO05D000818 2.0e-11 74.3 250 28.8
CSS0033539 Camellia sinensis var. sinensis HOM05D011823 ORTHO05D014382 2.6e-11 73.9 251 26.7
Hma1.2p1_2482F.1_g323020 Hydrangea macrophylla HOM05D002077 ORTHO05D000818 2.6e-11 73.9 251 26.7
PSO782G4919 Papaver somniferum HOM05D002077 ORTHO05D000818 4.5e-11 73.2 246 24.4
Hma1.2p1_3140F.1_g333050 Hydrangea macrophylla HOM05D002077 ORTHO05D000818 7.7e-11 72.4 253 27.7
CSS0043143 Camellia sinensis var. sinensis HOM05D002077 ORTHO05D000818 1.0e-10 72.0 247 26.7
Manes.02G024600 Manihot esculenta HOM05D002077 ORTHO05D000818 1.0e-10 72.0 221 29.4
SalBow2G3420 Salvia bowleyana HOM05D002077 ORTHO05D000818 1.3e-10 71.6 252 27.0
Aqoxy2G00214 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 3.8e-10 70.1 177 27.7
Sabra16G0021500 Salix brachista HOM05D002273 ORTHO05D000818 3.8e-10 70.1 253 24.5
COL.COLO4_28668 Corchorus olitorius HOM05D002077 ORTHO05D000818 5.0e-10 69.7 142 31.0
QL09p041417 Quercus lobata HOM05D002077 ORTHO05D000818 6.5e-10 69.3 260 23.5
BcaB01g02688 Brassica carinata HOM05D002077 ORTHO05D000818 1.5e-09 68.2 265 24.5
BraA07t31041Z Brassica rapa HOM05D002077 ORTHO05D000818 3.2e-09 67.0 214 25.7
MBI18_g44743_MAGBIO Magnolia biondii HOM05D002077 ORTHO05D000818 3.2e-09 67.0 255 25.9
Nn1g01424 Nelumbo nucifera HOM05D002077 ORTHO05D000818 3.2e-09 67.0 196 28.1
Lsat_1_v5_gn_6_61000 Lactuca sativa HOM05D002273 ORTHO05D000818 4.2e-09 66.6 239 27.2
BcaB01g02685 Brassica carinata HOM05D002077 ORTHO05D000818 5.5e-09 66.2 265 24.2
BcaB01g02687 Brassica carinata HOM05D002077 ORTHO05D000818 5.5e-09 66.2 265 24.2
BcaB01g02690 Brassica carinata HOM05D002077 ORTHO05D000818 5.5e-09 66.2 265 24.2
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 5.5e-09 66.2 270 24.4
HPP92_013985 Vanilla planifolia HOM05D002273 ORTHO05D000818 5.5e-09 66.2 244 21.7
Actinidia27496 Actinidia chinensis HOM05D002273 ORTHO05D000818 7.2e-09 65.9 262 24.0
QL12p002854 Quercus lobata HOM05D002077 ORTHO05D000818 7.2e-09 65.9 270 27.4
RcHm_v2.0_Chr4g0414641 Rosa chinensis HOM05D002273 ORTHO05D000818 9.4e-09 65.5 261 24.9
Aqoxy7G02717 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 1.2e-08 65.1 158 27.8
FAN12G1649 Fragaria x ananassa HOM05D002747 ORTHO05D003069 1.2e-08 65.1 257 26.1
Dinv25029 Davidia involucrata HOM05D002273 ORTHO05D000818 1.6e-08 64.7 250 23.2
Lsat_1_v5_gn_6_61060 Lactuca sativa HOM05D002273 ORTHO05D000818 1.6e-08 64.7 239 24.3
RcHm_v2.0_Chr4g0414631 Rosa chinensis HOM05D002273 ORTHO05D000818 1.6e-08 64.7 266 23.7
CSS0000286 Camellia sinensis var. sinensis HOM05D002273 ORTHO05D000818 2.1e-08 64.3 257 24.1
HPP92_008435 Vanilla planifolia HOM05D002077 ORTHO05D000818 2.1e-08 64.3 252 23.0
FvH4_4g13771 Fragaria vesca HOM05D002273 ORTHO05D000818 2.7e-08 63.9 257 26.1
vmacro15545 Vaccinium macrocarpon HOM05D002273 ORTHO05D000818 2.7e-08 63.9 243 25.1
HPP92_008461 Vanilla planifolia HOM05D002077 ORTHO05D000818 2.7e-08 63.9 252 23.0
Nn1g06062 Nelumbo nucifera HOM05D002273 ORTHO05D000818 3.6e-08 63.5 262 23.3
HanXRQChr07g0185521 Helianthus annuus HOM05D002273 ORTHO05D000818 6.1e-08 62.8 247 25.5
Atru.chr2.2845 Acer truncatum HOM05D002077 ORTHO05D000818 8.0e-08 62.4 49 49.0
Hma1.2p1_2094F.1_g313920 Hydrangea macrophylla HOM05D002077 ORTHO05D000818 1.0e-07 62.0 252 27.4
Lsat_1_v5_gn_6_60060 Lactuca sativa HOM05D002273 ORTHO05D000818 1.4e-07 61.6 267 22.8
Potri.016G019500 Populus trichocarpa HOM05D002273 ORTHO05D000818 1.4e-07 61.6 249 23.3
CSS0014052 Camellia sinensis var. sinensis HOM05D002077 ORTHO05D000818 2.3e-07 60.8 233 24.5
Manes.14G145200 Manihot esculenta HOM05D003333 ORTHO05D003836 2.3e-07 60.8 264 24.2
Atru.chr13.1136 Acer truncatum HOM05D002325 ORTHO05D000336 5.2e-07 59.7 253 25.3
CSS0029968 Camellia sinensis var. sinensis HOM05D002325 ORTHO05D000336 5.2e-07 59.7 252 23.8
THA.LOC104816655 Tarenaya hassleriana HOM05D002325 ORTHO05D000336 5.2e-07 59.7 257 23.7
Actinidia30788 Actinidia chinensis HOM05D002325 ORTHO05D000336 6.7e-07 59.3 252 23.8
Lj6A542G10 Lonicera japonica HOM05D002273 ORTHO05D000818 6.7e-07 59.3 248 23.0
Dinv21990 Davidia involucrata HOM05D002273 ORTHO05D000818 8.8e-07 58.9 280 21.8
Dinv30109 Davidia involucrata HOM05D002273 ORTHO05D000818 8.8e-07 58.9 280 21.8
Haze_06779 Corylus avellana HOM05D002077 ORTHO05D000818 1.5e-06 58.2 153 28.8
Thhalv10005418m.g Eutrema salsugineum HOM05D002077 ORTHO05D000818 1.5e-06 58.2 236 27.1
THA.LOC104806991 Tarenaya hassleriana HOM05D002077 ORTHO05D000818 2.0e-06 57.8 244 23.4
Actinidia02878 Actinidia chinensis HOM05D002273 ORTHO05D000818 2.6e-06 57.4 260 23.5
Rhsim09G0057500 Rhododendron simsii HOM05D002273 ORTHO05D000818 3.3e-06 57.0 261 22.6
Thhalv10015761m.g Eutrema salsugineum HOM05D002077 ORTHO05D000818 4.4e-06 56.6 251 26.3
MD01G1033400 Malus domestica HOM05D002325 ORTHO05D000336 4.4e-06 56.6 261 23.0
RcHm_v2.0_Chr3g0460331 Rosa chinensis HOM05D002273 ORTHO05D000818 5.7e-06 56.2 301 21.9
TAR376G0320 Trochodendron aralioides HOM05D002325 ORTHO05D000336 5.7e-06 56.2 251 21.9
CSS0050412 Camellia sinensis var. sinensis HOM05D002273 ORTHO05D000818 7.5e-06 55.8 257 21.4
Rhsim06G0204000 Rhododendron simsii HOM05D011555 ORTHO05D013920 7.5e-06 55.8 227 20.7
TAR624G0446 Trochodendron aralioides HOM05D010647 ORTHO05D012576 7.5e-06 55.8 231 22.1


User provided reference genes

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