Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029336 Camellia sinensis var. sinensis HOM05D006207 ORTHO05D007868 1.1e-173 613.2 324 100.0
Actinidia11552 Actinidia chinensis HOM05D006207 ORTHO05D007868 1.0e-126 457.2 324 74.7
Actinidia29070 Actinidia chinensis HOM05D006207 ORTHO05D007868 2.2e-124 449.5 324 72.2
Dinv35401 Davidia involucrata HOM05D006207 ORTHO05D007868 3.7e-124 448.7 329 73.6
Dinv12164 Davidia involucrata HOM05D006207 ORTHO05D007868 2.1e-119 433.0 330 72.4
vmacro08907 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 1.7e-105 386.7 326 65.0
vmacro20324 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 8.8e-102 374.4 312 67.0
Lsat_1_v5_gn_8_103441 Lactuca sativa HOM05D006207 ORTHO05D007868 3.4e-101 372.5 326 61.3
Manes.09G111300 Manihot esculenta HOM05D006207 ORTHO05D007868 1.0e-97 360.9 320 59.7
TAR633G0541 Trochodendron aralioides HOM05D006207 ORTHO05D007868 5.5e-96 355.1 324 59.3
TAR623G0507 Trochodendron aralioides HOM05D006207 ORTHO05D007868 1.4e-94 350.5 324 59.3
CiPaw.09G215000 Carya illinoinensis HOM05D006207 ORTHO05D007868 2.3e-94 349.7 321 64.8
CANSAT35G0048 Cannabis sativa HOM05D006207 ORTHO05D007868 4.0e-94 349.0 321 58.3
Aqoxy1G01290 Aquilegia oxysepala HOM05D006207 ORTHO05D007868 9.8e-93 344.4 340 56.8
Rhsim04G0125000 Rhododendron simsii HOM05D006207 ORTHO05D007868 4.1e-91 339.0 327 58.7
GSVIVG01030275001 Vitis vinifera HOM05D006207 ORTHO05D002478 4.1e-91 339.0 326 57.1
Cc06_g00770 Coffea canephora HOM05D006207 ORTHO05D002478 2.0e-90 336.7 328 56.4
PGSC0003DMG400017108 Solanum tuberosum HOM05D006207 ORTHO05D007868 1.3e-89 334.0 327 56.3
Sopen09g008460 Solanum pennellii HOM05D006207 ORTHO05D007868 1.7e-89 333.6 327 56.3
HanXRQChr16g0510291 Helianthus annuus HOM05D006207 ORTHO05D007868 3.3e-88 329.3 327 57.2
Ciclev10012309m.g Citrus clementina HOM05D006207 ORTHO05D007868 5.6e-88 328.6 327 55.0
CsaV3_4G026760 Cucumis sativus L. HOM05D006207 ORTHO05D007868 5.6e-88 328.6 328 55.5
CAN.G967.4 Capsicum annuum HOM05D006207 ORTHO05D007868 1.6e-87 327.0 327 55.7
Sed0003544 Sechium edule HOM05D006207 ORTHO05D007868 2.1e-87 326.6 325 56.6
MELO3C026025.2 Cucumis melo HOM05D006207 ORTHO05D007868 2.8e-87 326.2 326 55.2
Nitab4.5_0000230g0180 Nicotiana tabacum HOM05D006207 ORTHO05D007868 3.6e-87 325.9 309 58.3
arahy.Tifrunner.gnm1.ann1.S95MPE Arachis hypogaea HOM05D006207 ORTHO05D007868 8.9e-86 321.2 337 57.6
Atru.chr8.2331 Acer truncatum HOM05D006207 ORTHO05D007868 7.5e-85 318.2 339 54.9
ClCG04G006690 Citrullus lanatus HOM05D006207 ORTHO05D007868 9.8e-85 317.8 326 54.6
arahy.Tifrunner.gnm1.ann1.WBCD4G Arachis hypogaea HOM05D006207 ORTHO05D007868 1.3e-84 317.4 338 57.7
Nitab4.5_0015157g0010 Nicotiana tabacum HOM05D006207 ORTHO05D007868 1.7e-84 317.0 310 55.8
Prupe.6G284500 Prunus persica HOM05D006207 ORTHO05D007868 1.7e-84 317.0 325 55.1
Duzib093G0843 Durio zibethinus HOM05D006207 ORTHO05D007868 4.9e-84 315.5 320 55.3
Lj3g0024527 Lotus japonicus HOM05D006207 ORTHO05D007868 8.3e-84 314.7 322 55.3
RcHm_v2.0_Chr3g0461671 Rosa chinensis HOM05D006207 ORTHO05D007868 8.3e-84 314.7 320 59.4
Nn2g11009 Nelumbo nucifera HOM05D006207 ORTHO05D007868 1.4e-83 313.9 311 54.7
Sed0019485 Sechium edule HOM05D006207 ORTHO05D007868 1.4e-83 313.9 327 52.9
Cpa.g.sc5.234 Carica papaya HOM05D006207 ORTHO05D007868 1.9e-83 313.5 328 54.9
Gorai.006G185200 Gossypium raimondii HOM05D006207 ORTHO05D007868 4.1e-83 312.4 327 55.4
Gohir.A09G167800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 7.0e-83 311.6 327 56.0
THA.LOC104823306 Tarenaya hassleriana HOM05D006207 ORTHO05D007868 7.0e-83 311.6 323 52.6
Thecc.05G007100 Theobroma cacao HOM05D006207 ORTHO05D007868 2.0e-82 310.1 320 53.4
Gohir.A01G229800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 6.0e-82 308.5 320 54.4
QL07p033964 Quercus lobata HOM05D006207 ORTHO05D007868 6.0e-82 308.5 326 55.8
Gohir.D01G219700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.7e-81 307.0 320 53.8
Gorai.002G266400 Gossypium raimondii HOM05D006207 ORTHO05D007868 6.6e-81 305.1 320 53.4
Gohir.D09G163700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.1e-80 304.3 327 55.0
Sp3g07200 Schrenkiella parvula HOM05D006207 ORTHO05D007868 1.9e-80 303.5 323 52.9
AT3G08780 Arabidopsis thaliana HOM05D006207 ORTHO05D007868 5.6e-80 302.0 321 52.0
Thhalv10021171m.g Eutrema salsugineum HOM05D006207 ORTHO05D007868 5.6e-80 302.0 321 52.3
PGR031G0899 Punica granatum HOM05D006207 ORTHO05D007868 7.3e-80 301.6 328 52.7
COL.COLO4_14454 Corchorus olitorius HOM05D006207 ORTHO05D007868 1.2e-79 300.8 322 54.0
Oeu038722.1 Olea europaea HOM05D006207 ORTHO05D007868 1.2e-79 300.8 324 53.1
Oeu057638.1 Olea europaea HOM05D006207 ORTHO05D007868 1.2e-79 300.8 324 51.2
Glyma.01G125600 Glycine max HOM05D006207 ORTHO05D007868 2.1e-79 300.1 323 54.8
Peaxi162Scf00744g00339 Petunia axillaris HOM05D006207 ORTHO05D007868 6.2e-79 298.5 343 50.7
Psat7g249160 Pisum sativum HOM05D006207 ORTHO05D007868 1.1e-78 297.7 339 51.9
DCAR_023998 Daucus carota HOM05D006207 ORTHO05D007868 2.3e-78 296.6 327 51.4
Lj2C67T4 Lonicera japonica HOM05D006207 ORTHO05D007868 4.0e-78 295.8 200 77.0
AL3G19780 Arabidopsis lyrata HOM05D006207 ORTHO05D007868 5.2e-78 295.4 321 52.0
MSTRG.5544 Avicennia marina HOM05D006207 ORTHO05D007868 6.8e-78 295.0 324 51.5
Lalb_Chr12g0207271 Lupinus albus HOM05D006207 ORTHO05D007868 6.8e-78 295.0 325 50.8
TWI53G1221 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 6.8e-78 295.0 324 54.3
Glyma.U032705 Glycine max HOM05D006207 ORTHO05D007868 2.0e-77 293.5 327 53.5
Aa31LG5G18780 Aethionema arabicum HOM05D006207 ORTHO05D007868 4.4e-77 292.4 309 52.1
C05p59060 Brassica napus HOM05D006207 ORTHO05D007868 4.4e-77 292.4 324 51.9
Migut.J00099 Erythranthe guttata HOM05D006207 ORTHO05D007868 4.4e-77 292.4 324 53.1
A05p40020 Brassica napus HOM05D006207 ORTHO05D007868 7.5e-77 291.6 323 54.2
FAN05G3975 Fragaria x ananassa HOM05D006207 ORTHO05D007868 7.5e-77 291.6 322 55.0
BolC5t34558H Brassica oleracea HOM05D006207 ORTHO05D007868 9.8e-77 291.2 324 54.6
BraA05t22911Z Brassica rapa HOM05D006207 ORTHO05D007868 9.8e-77 291.2 323 54.2
TWI74G1498 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 1.3e-76 290.8 324 52.8
Phvul.010G064400 Phaseolus vulgaris HOM05D006207 ORTHO05D007868 2.2e-76 290.0 332 51.5
Carub.0003s0791 Capsella rubella HOM05D006207 ORTHO05D007868 8.3e-76 288.1 323 51.4
Sabra16G0120700 Salix brachista HOM05D006207 ORTHO05D007868 8.3e-76 288.1 328 51.8
FAN05G5543 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.1e-75 287.7 322 54.7
EL10Ac5g12487 Beta vulgaris HOM05D006207 ORTHO05D007868 1.4e-75 287.3 326 50.6
Duzib106G1231 Durio zibethinus HOM05D006207 ORTHO05D007868 2.4e-75 286.6 309 51.5
CARHR083100 Cardamine hirsuta HOM05D006207 ORTHO05D007868 4.1e-75 285.8 324 50.0
Sc01g0005970 Simmondsia chinensis HOM05D006207 ORTHO05D007868 5.4e-75 285.4 328 53.4
Potri.016G126200 Populus trichocarpa HOM05D006207 ORTHO05D007868 2.1e-74 283.5 328 51.2
PSO765G0078 Papaver somniferum HOM05D006207 ORTHO05D007868 2.3e-73 280.0 322 52.5
VMungo0331G1865 Vigna mungo HOM05D006207 ORTHO05D007868 8.6e-73 278.1 321 52.0
Cfa017117 Carpinus fangiana HOM05D006207 ORTHO05D007868 3.3e-72 276.2 308 55.8
FvH4_6g10650 Fragaria vesca HOM05D006207 ORTHO05D007868 4.3e-72 275.8 322 53.7
FAN14G5611 Fragaria x ananassa HOM05D006207 ORTHO05D007868 4.3e-72 275.8 322 53.7
FAN09G2678 Fragaria x ananassa HOM05D006207 ORTHO05D007868 2.8e-71 273.1 322 53.4
ECA236G5132 Erigeron canadensis HOM05D006207 ORTHO05D007868 3.6e-71 272.7 327 53.2
CDE07G0940 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 7.6e-69 265.0 324 49.4
MBI03_g07303_MAGBIO Magnolia biondii HOM05D006207 ORTHO05D007868 2.2e-68 263.5 316 51.9
TPR.G5270 Trifolium pratense HOM05D006207 ORTHO05D007868 1.9e-64 250.4 334 45.5
unitig_27.g24873 Utricularia gibba HOM05D006207 ORTHO05D007868 2.1e-63 246.9 324 47.2
BcaC05g29617 Brassica carinata HOM05D006207 ORTHO05D007868 8.1e-63 245.0 280 51.1
Ah.12g059050 Amaranthus hybridus HOM05D006207 ORTHO05D007868 6.8e-62 241.9 313 49.5
Medtr4g014250 Medicago truncatula HOM05D006207 ORTHO05D007868 4.4e-61 239.2 318 45.3
Rhsim05G0225500 Rhododendron simsii HOM05D006207 ORTHO05D007868 4.4e-61 239.2 184 67.4
SHI12871 Sapria himalayana HOM05D006207 ORTHO05D007868 2.2e-60 236.9 313 46.0
Lj3P946T49 Lonicera japonica HOM05D006207 ORTHO05D007868 3.8e-60 236.1 188 67.6
CDE06G0694 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 1.7e-57 227.3 324 43.8
HPP92_019707 Vanilla planifolia HOM05D006207 ORTHO05D007868 2.3e-57 226.9 332 43.4
Solyc09g015180.4 Solanum lycopersicum HOM05D006207 ORTHO05D007868 1.3e-55 221.1 249 50.2
ATR0594G098 Amborella trichopoda HOM05D006207 ORTHO05D007868 3.1e-54 216.5 311 43.4
SEGI_14997 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 3.5e-42 176.4 400 32.5
AUR62030762 Chenopodium quinoa HOM05D006207 ORTHO05D007868 1.0e-41 174.9 309 38.2
Pp3c3_16910 Physcomitrium patens HOM05D006207 ORTHO05D007868 4.0e-38 162.9 357 33.6
Duzib128G0456 Durio zibethinus HOM05D006207 ORTHO05D007868 3.5e-34 149.8 183 48.1
AUR62030533 Chenopodium quinoa HOM05D006207 ORTHO05D007868 3.9e-33 146.4 140 56.4
Os07g0540200 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 6.2e-31 139.0 318 33.6
Zm00001eb163300 Zea mays HOM05D006207 ORTHO05D007868 8.2e-31 138.7 323 35.3
MD04G1166200 Malus domestica HOM05D006207 ORTHO05D007868 6.9e-30 135.6 171 48.5
AagrBONN_evm.TU.Sc2ySwM_368.1939 Anthoceros agrestis HOM05D006207 ORTHO05D007868 1.1e-24 118.2 396 25.8
Os04g0479300 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 6.3e-23 112.5 315 31.1
Ca_20352_v3 Cicer arietinum L. HOM05D006207 ORTHO05D007868 1.4e-22 111.3 84 65.5
Zm00001eb421620 Zea mays HOM05D006207 ORTHO05D007868 6.5e-20 102.4 199 33.7
MD04G1166100 Malus domestica HOM05D006207 ORTHO05D007868 6.1e-18 95.9 73 67.1
SalBow6G1507 Salvia bowleyana HOM05D000800 ORTHO05D000658 1.1e-16 91.7 111 46.8
CBR_g48858 Chara braunii HOM05D006207 ORTHO05D007868 7.4e-16 89.0 356 26.1
SalBow2G0248 Salvia bowleyana HOM05D007863 ORTHO05D009265 7.2e-11 72.4 82 47.6
VMungo1215G0839 Vigna mungo HOM05D006207 ORTHO05D007868 2.1e-10 70.9 81 45.7
Mapoly0060s0108 Marchantia polymorpha HOM05D006207 ORTHO05D007868 1.1e-08 65.1 134 35.1
SalBow8G1578 Salvia bowleyana HOM05D006207 ORTHO05D007868 2.0e-08 64.3 82 45.1
VMungo1309G1345 Vigna mungo HOM05D006207 ORTHO05D007868 2.0e-08 64.3 73 47.9
VMungo0647G0753 Vigna mungo HOM05D006207 ORTHO05D007868 1.8e-06 57.8 122 36.9
Cc08_g04640 Coffea canephora HOM05D006207 ORTHO05D007868 3.1e-06 57.0 98 41.8
SalBow1G6530 Salvia bowleyana HOM05D006207 ORTHO05D007868 3.1e-06 57.0 107 38.3


User provided reference genes

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