Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029313 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 2.9e-117 425.2 215 100.0
CSS0002085 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 2.2e-104 382.5 257 80.9
CSS0041884 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 2.8e-96 355.5 265 76.2
CSS0004888 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.3e-88 330.1 270 69.6
CSS0015899 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 7.0e-87 324.3 275 69.1
CSS0001709 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 2.2e-85 319.3 291 64.9
CSS0039150 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.8e-77 292.0 206 77.7
vmacro03558 Vaccinium macrocarpon HOM05D003515 ORTHO05D004347 3.2e-39 166.0 288 43.8
Dinv07004 Davidia involucrata HOM05D003515 ORTHO05D004347 9.5e-36 154.5 286 39.9
RhsimUnG0176900 Rhododendron simsii HOM05D003515 ORTHO05D004347 1.5e-33 147.1 314 38.9
Rhsim13G0134000 Rhododendron simsii HOM05D003515 ORTHO05D004347 2.4e-31 139.8 193 49.7
Lj1C1149T14 Lonicera japonica HOM05D003515 ORTHO05D004347 3.4e-25 119.4 269 36.1
CSS0031993 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 2.9e-24 116.3 261 36.8
QL11p012061 Quercus lobata HOM05D003515 ORTHO05D004347 3.8e-24 115.9 277 34.3
Cfa001125 Carpinus fangiana HOM05D003515 ORTHO05D004347 1.1e-20 104.4 282 33.0
TAR624G0550 Trochodendron aralioides HOM05D003515 ORTHO05D004347 6.2e-19 98.6 198 37.4
Haze_05267 Corylus avellana HOM05D003515 ORTHO05D004347 8.1e-19 98.2 306 30.4
Cc09_g05170 Coffea canephora HOM05D003515 ORTHO05D004347 1.4e-18 97.4 274 34.3
CiPaw.10G105500 Carya illinoinensis HOM05D003515 ORTHO05D004347 3.4e-17 92.8 279 34.4
Atru.chr10.315 Acer truncatum HOM05D003515 ORTHO05D004347 2.9e-16 89.7 277 32.1
RcHm_v2.0_Chr5g0021121 Rosa chinensis HOM05D003515 ORTHO05D004347 1.1e-15 87.8 278 32.4
Duzib132G1190 Durio zibethinus HOM05D003515 ORTHO05D004347 9.3e-15 84.7 272 32.0
TWI63G0015 Tripterygium wilfordii HOM05D003515 ORTHO05D004347 9.3e-15 84.7 204 34.8
RcHm_v2.0_Chr5g0021201 Rosa chinensis HOM05D003515 ORTHO05D004347 2.7e-14 83.2 274 31.0
Hma1.2p1_0088F.1_g045250 Hydrangea macrophylla HOM05D003515 ORTHO05D004347 4.6e-14 82.4 140 40.7
CANSAT35G1862 Cannabis sativa HOM05D003515 ORTHO05D004347 1.5e-12 77.4 281 30.2
FvH4_3g13010 Fragaria vesca HOM05D003515 ORTHO05D004347 1.5e-12 77.4 278 29.9
GSVIVG01012151001 Vitis vinifera HOM05D003515 ORTHO05D004347 1.5e-12 77.4 327 27.8
FAN11G3814 Fragaria x ananassa HOM05D003515 ORTHO05D004347 1.9e-12 77.0 276 29.7
Oeu008987.4 Olea europaea HOM05D003515 ORTHO05D004347 3.3e-12 76.3 201 32.3
CSS0035626 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 7.4e-12 75.1 75 58.7
Thecc.02G003700 Theobroma cacao HOM05D003515 ORTHO05D004347 2.1e-11 73.6 214 35.0
CSS0002123 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.6e-11 72.8 82 53.7
CSS0032761 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 6.2e-11 72.0 82 53.7
Prupe.4G118000 Prunus persica HOM05D003515 ORTHO05D004347 4.0e-10 69.3 278 30.6
Nn7g38343 Nelumbo nucifera HOM05D003515 ORTHO05D004347 3.4e-09 66.2 197 32.0
Manes.03G074900 Manihot esculenta HOM05D003515 ORTHO05D004347 4.5e-09 65.9 272 29.4
HanXRQChr14g0439721 Helianthus annuus HOM05D003515 ORTHO05D004347 5.5e-07 58.9 238 26.5
COL.COLO4_16231 Corchorus olitorius HOM05D003515 ORTHO05D004347 1.6e-06 57.4 263 30.0
FAN21G1878 Fragaria x ananassa HOM05D003515 ORTHO05D004347 2.7e-06 56.6 276 27.5
FAN16G1075 Fragaria x ananassa HOM05D003515 ORTHO05D004347 3.5e-06 56.2 285 26.0
Gorai.009G257800 Gossypium raimondii HOM05D003515 ORTHO05D004347 3.5e-06 56.2 269 28.3
Phvul.002G188000 Phaseolus vulgaris HOM05D003515 ORTHO05D004347 7.9e-06 55.1 261 25.3


User provided reference genes

Program Settings