Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029307 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.4e-164 581.6 305 100.0
CSS0003791 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.0e-112 409.1 300 77.0
CSS0032415 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.7e-94 349.0 312 63.5
CSS0022186 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.1e-93 345.5 300 66.0
CSS0027146 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.1e-93 345.5 324 61.4
CSS0010878 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.6e-87 326.2 296 61.8
CSS0042755 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.4e-48 197.6 241 49.0
CSS0003795 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D010101 2.6e-47 193.4 201 53.7
CSS0030731 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.2e-46 190.3 201 53.2
CSS0047661 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 5.5e-37 159.1 227 43.2
CSS0034581 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.0e-35 154.8 216 42.6
CSS0025888 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.0e-27 126.7 187 41.7
CSS0031884 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 5.7e-26 122.5 187 41.2
QL09p028133 Quercus lobata HOM05D009378 ORTHO05D010101 8.0e-20 102.1 231 32.5
Haze_19953 Corylus avellana HOM05D009378 ORTHO05D010101 4.4e-18 96.3 108 46.3
Cfa013571 Carpinus fangiana HOM05D000125 ORTHO05D010101 6.3e-17 92.4 192 33.3
Haze_00406 Corylus avellana HOM05D000125 ORTHO05D010101 6.3e-17 92.4 100 48.0
Haze_00404 Corylus avellana HOM05D000125 ORTHO05D010101 9.1e-16 88.6 111 42.3
QL09p024465 Quercus lobata HOM05D000125 ORTHO05D010101 9.1e-16 88.6 198 32.8
TWI81G0642 Tripterygium wilfordii HOM05D000125 ORTHO05D010101 1.2e-15 88.2 138 37.7
Cfa016027 Carpinus fangiana HOM05D009378 ORTHO05D010101 2.0e-15 87.4 179 36.3
QL09p024149 Quercus lobata HOM05D009378 ORTHO05D010101 2.0e-15 87.4 194 34.0
QL93p0209_0042 Quercus lobata HOM05D009378 ORTHO05D010101 2.0e-15 87.4 194 34.0
Cfa016030 Carpinus fangiana HOM05D000125 ORTHO05D010101 3.5e-15 86.7 176 34.7
Haze_00427 Corylus avellana HOM05D000125 ORTHO05D010101 3.5e-15 86.7 98 45.9
QL09p024175 Quercus lobata HOM05D009378 ORTHO05D010101 4.5e-15 86.3 206 34.5
QL09p024439 Quercus lobata HOM05D009378 ORTHO05D010101 5.9e-15 85.9 186 31.2
QL02p073603 Quercus lobata HOM05D000125 ORTHO05D010101 7.7e-15 85.5 129 41.1
Cpa.g.sc623.3 Carica papaya HOM05D009378 ORTHO05D010101 1.0e-14 85.1 205 31.2
QL93p0209_0016 Quercus lobata HOM05D009378 ORTHO05D010101 1.0e-14 85.1 206 34.0
Cfa016894 Carpinus fangiana HOM05D000125 ORTHO05D010101 8.5e-14 82.0 135 38.5
Cfa016029 Carpinus fangiana HOM05D009378 ORTHO05D010101 1.1e-13 81.6 100 44.0
CiPaw.06G031800 Carya illinoinensis HOM05D000125 ORTHO05D010101 1.5e-13 81.3 100 42.0
QL04p029779 Quercus lobata HOM05D020596 ORTHO05D010101 3.2e-13 80.1 140 35.0
Ciclev10014060m.g Citrus clementina HOM05D000125 ORTHO05D000120 4.2e-13 79.7 214 27.6
QL09p024013 Quercus lobata HOM05D008014 ORTHO05D010101 4.2e-13 79.7 128 33.6
QL04p029700 Quercus lobata HOM05D020596 ORTHO05D010101 5.5e-13 79.3 110 39.1
Haze_00511 Corylus avellana HOM05D009378 ORTHO05D010101 1.2e-12 78.2 100 43.0
QL05p062837 Quercus lobata HOM05D009378 ORTHO05D010101 2.1e-12 77.4 118 39.0
Eucgr.E00385 Eucalyptus grandis HOM05D000125 ORTHO05D010101 2.7e-12 77.0 101 35.6
QL04p029513 Quercus lobata HOM05D000125 ORTHO05D000120 2.7e-12 77.0 101 39.6
PGR031G1316 Punica granatum HOM05D000125 ORTHO05D010101 3.6e-12 76.6 214 27.1
Cpa.g.sc623.1 Carica papaya HOM05D009378 ORTHO05D010101 4.7e-12 76.3 202 30.7
Haze_13413 Corylus avellana HOM05D000125 ORTHO05D010101 4.7e-12 76.3 201 30.8
Cfa016031 Carpinus fangiana HOM05D000125 ORTHO05D010101 6.1e-12 75.9 185 33.5
Actinidia02169 Actinidia chinensis HOM05D000125 ORTHO05D030879 8.0e-12 75.5 118 37.3
QL09p024027 Quercus lobata HOM05D009378 ORTHO05D010101 2.3e-11 73.9 139 34.5
QL04p029580 Quercus lobata HOM05D000125 ORTHO05D000120 5.2e-11 72.8 152 30.3
QL04p029877 Quercus lobata HOM05D020596 ORTHO05D010101 5.2e-11 72.8 152 30.3
PGR044G2047 Punica granatum HOM05D009378 ORTHO05D010101 2.6e-10 70.5 137 35.8
QL04p029334 Quercus lobata HOM05D020596 ORTHO05D010101 2.6e-10 70.5 110 37.3
Haze_14777 Corylus avellana HOM05D000125 ORTHO05D010101 3.4e-10 70.1 98 43.9
Actinidia13804 Actinidia chinensis HOM05D000125 ORTHO05D030879 4.4e-10 69.7 162 30.9
Actinidia13806 Actinidia chinensis HOM05D000125 ORTHO05D030879 4.4e-10 69.7 146 29.5
PGR042G0442 Punica granatum HOM05D000125 ORTHO05D000807 4.4e-10 69.7 103 37.9
Cfa007320 Carpinus fangiana HOM05D000125 ORTHO05D010101 1.3e-09 68.2 98 40.8
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 1.3e-09 68.2 107 34.6
PGR031G1223 Punica granatum HOM05D009378 ORTHO05D010101 1.7e-09 67.8 110 36.4
Eucgr.E00390 Eucalyptus grandis HOM05D009378 ORTHO05D010101 2.8e-09 67.0 138 32.6
CANSAT21G1400 Cannabis sativa HOM05D000125 ORTHO05D010101 4.8e-09 66.2 102 38.2
Eucgr.E00393 Eucalyptus grandis HOM05D000125 ORTHO05D000120 8.3e-09 65.5 103 38.8
Sed0024411 Sechium edule HOM05D024292 ORTHO05D010101 8.3e-09 65.5 188 28.2
Rhsim13G0216300 Rhododendron simsii HOM05D000448 ORTHO05D000291 3.1e-08 63.5 234 28.2
ClCG01G004320 Citrullus lanatus HOM05D024292 ORTHO05D010101 2.0e-07 60.8 112 34.8
Ciclev10027597m.g Citrus clementina HOM05D000125 ORTHO05D000120 4.5e-07 59.7 208 27.4
PGR102G3309 Punica granatum HOM05D000125 ORTHO05D010101 1.3e-06 58.2 111 32.4
PGR042G3408 Punica granatum HOM05D000125 ORTHO05D000120 1.7e-06 57.8 101 33.7
MELO3C005509.2 Cucumis melo HOM05D024292 ORTHO05D010101 2.9e-06 57.0 116 31.9
CANSAT11G0593 Cannabis sativa HOM05D000125 ORTHO05D010101 5.0e-06 56.2 115 33.0
ClCG01G004310 Citrullus lanatus HOM05D024292 ORTHO05D010101 6.5e-06 55.8 212 25.0


User provided reference genes

Program Settings