Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 6.3e-95 350.9 194 100.0
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.0e-81 307.0 180 92.2
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.0e-81 307.0 180 92.2
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 5.7e-80 301.2 180 90.6
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.3e-72 275.4 180 85.0
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 5.0e-60 235.0 130 95.4
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.1e-33 147.5 111 69.4
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 9.8e-32 141.0 115 67.8
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.3e-31 140.6 110 70.0
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 4.1e-30 135.6 112 67.0
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 7.1e-30 134.8 112 68.8
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 2.3e-28 129.8 110 67.3
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 2.3e-28 129.8 109 65.1
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 3.9e-28 129.0 102 66.7
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 8.9e-25 117.9 96 67.7
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 1.5e-24 117.1 110 63.6
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.0e-24 116.7 119 58.8
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 5.8e-24 115.2 111 58.6
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 7.6e-24 114.8 111 61.3
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 1.3e-23 114.0 96 65.6
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.2e-23 113.2 119 56.3
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 2.9e-23 112.8 111 56.8
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 3.8e-23 112.5 109 56.9
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 6.4e-23 111.7 100 61.0
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 1.1e-22 110.9 95 64.2
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 1.9e-22 110.2 111 63.1
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 3.2e-22 109.4 104 59.6
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 3.2e-22 109.4 82 67.1
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 4.1e-22 109.0 91 67.0
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 6.0e-21 105.1 111 53.2
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 6.0e-21 105.1 111 53.2
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 6.0e-21 105.1 111 53.2
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 7.8e-21 104.8 86 64.0
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 1.3e-20 104.0 137 50.4
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 1.3e-20 104.0 111 54.1
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 3.0e-20 102.8 111 55.0
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 3.0e-20 102.8 94 61.7
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 3.0e-20 102.8 82 64.6
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 5.1e-20 102.1 111 54.1
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 6.6e-20 101.7 101 56.4
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 6.6e-20 101.7 120 52.5
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 2.5e-19 99.8 112 51.8
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 2.5e-19 99.8 95 60.0
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 2.5e-19 99.8 87 62.1
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 4.3e-19 99.0 92 59.8
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 5.6e-19 98.6 97 52.6
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 9.6e-19 97.8 93 57.0
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 1.6e-18 97.1 91 59.3
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 2.8e-18 96.3 94 54.3
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 3.6e-18 95.9 89 60.7
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 6.2e-18 95.1 88 60.2
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 8.1e-18 94.7 109 54.1
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 1.4e-17 94.0 131 40.5
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 1.8e-17 93.6 112 52.7
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 4.0e-17 92.4 87 60.9
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 4.0e-17 92.4 91 58.2
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 8.9e-17 91.3 88 58.0
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 8.9e-17 91.3 109 54.1
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 8.9e-17 91.3 90 61.1
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 1.2e-16 90.9 92 56.5
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 1.5e-16 90.5 89 56.2
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 2.6e-16 89.7 79 68.4
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 4.4e-16 89.0 90 57.8
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 2.2e-15 86.7 88 58.0
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 3.8e-15 85.9 94 56.4
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 4.9e-15 85.5 79 63.3
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 1.1e-14 84.3 88 54.5
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 1.4e-14 84.0 73 64.4
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 1.4e-14 84.0 88 58.0
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 1.9e-14 83.6 86 53.5
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 1.9e-14 83.6 86 54.7
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 2.4e-14 83.2 75 64.0
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 3.2e-14 82.8 75 61.3
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 4.2e-14 82.4 111 49.5
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 4.2e-14 82.4 83 55.4
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 4.2e-14 82.4 91 52.7
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 5.4e-14 82.0 90 50.0
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 7.1e-14 81.6 111 45.9
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 9.3e-14 81.3 111 49.5
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 1.6e-13 80.5 90 50.0
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 3.5e-13 79.3 111 48.6
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 3.5e-13 79.3 90 55.6
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 4.6e-13 79.0 84 53.6
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 6.0e-13 78.6 88 51.1
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 6.0e-13 78.6 85 54.1
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 6.0e-13 78.6 89 48.3
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 7.8e-13 78.2 83 53.0
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 1.0e-12 77.8 95 46.3
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 1.0e-12 77.8 78 55.1
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 1.3e-12 77.4 86 57.0
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 2.3e-12 76.6 79 55.7
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 5.1e-12 75.5 88 52.3
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 8.7e-12 74.7 85 52.9
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 1.1e-11 74.3 98 40.8
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 1.5e-11 73.9 109 42.2
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 2.5e-11 73.2 71 53.5
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 3.3e-11 72.8 83 55.4
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 5.6e-11 72.0 111 41.4
Gohir.D10G139700 Gossypium hirsutum HOM05D006591 ORTHO05D007861 3.6e-10 69.3 60 63.3
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 4.8e-10 68.9 67 52.2
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.4e-09 67.4 69 56.5
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.4e-09 67.4 69 56.5
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.4e-09 67.4 69 56.5
EL10Ac6g14961 Beta vulgaris HOM05D027931 ORTHO05D007861 1.8e-09 67.0 92 41.3
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 2.4e-09 66.6 64 57.8
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 4.0e-09 65.9 69 55.1
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 5.3e-09 65.5 86 38.4
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 9.0e-09 64.7 85 50.6
Actinidia22381 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.5e-08 63.9 55 63.6
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 1.5e-08 63.9 93 37.6
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 1.5e-08 63.9 111 45.0
MBI18_g32376_MAGBIO Magnolia biondii HOM05D006591 ORTHO05D007861 1.7e-07 60.5 44 65.9
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 6.4e-07 58.5 119 40.3
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 1.1e-06 57.8 85 42.4
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 2.4e-06 56.6 74 45.9
EL10Ac6g14964 Beta vulgaris HOM05D027931 ORTHO05D007861 4.2e-06 55.8 64 50.0


User provided reference genes

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