Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029295 Camellia sinensis var. sinensis HOM05D026507 ORTHO05D110613 1.4e-96 356.3 179 100.0
CSS0022077 Camellia sinensis var. sinensis HOM05D026507 ORTHO05D000067 9.0e-72 273.9 189 77.8
CSS0041762 Camellia sinensis var. sinensis HOM05D026507 ORTHO05D000067 1.1e-69 266.9 189 76.7
CSS0001394 Camellia sinensis var. sinensis HOM05D026507 ORTHO05D000067 1.4e-61 240.0 194 67.5
CSS0011546 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.1e-44 183.0 287 45.3
CSS0021123 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.4e-42 174.5 287 44.3
CSS0016639 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.7e-42 174.1 287 43.9
CSS0035306 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.3e-40 168.3 280 43.9
CSS0018197 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.2e-33 146.4 287 39.7
CSS0041074 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.9e-23 111.7 287 34.1
CSS0020853 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.4e-16 89.7 290 30.0
Rhsim05G0213300 Rhododendron simsii HOM05D000045 ORTHO05D000067 8.5e-14 81.3 290 27.9
CSS0017425 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.3e-11 73.2 210 32.4
CSS0002394 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.5e-10 70.5 215 30.2
CSS0045912 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.5e-10 70.5 204 32.4
CSS0047046 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.4e-10 69.3 287 26.1
CSS0043688 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.7e-10 68.6 287 26.8
CSS0007642 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.5e-10 68.2 287 26.1
Rhsim01G0226000 Rhododendron simsii HOM05D000045 ORTHO05D000067 7.5e-10 68.2 89 44.9
CSS0006298 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.8e-10 67.8 287 26.5
CSS0024514 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.4e-08 63.2 142 32.4
CSS0041777 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.4e-08 62.0 142 32.4
CSS0008128 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.0e-08 61.6 122 32.0
Psat5g221600 Pisum sativum HOM05D000045 ORTHO05D000067 9.1e-08 61.2 145 31.7
CSS0024773 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.2e-07 60.8 142 31.7
CSS0024954 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.2e-07 60.8 122 32.0
CSS0017444 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.6e-07 60.5 89 38.2
CSS0035044 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.6e-07 60.5 122 32.0
FvH4_7g13761 Fragaria vesca HOM05D000045 ORTHO05D000067 4.5e-07 58.9 143 28.0
CSS0046475 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.9e-07 58.5 87 40.2
CSS0046621 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.7e-07 58.2 122 30.3
CSS0040930 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.3e-06 56.6 142 31.0
Ciclev10003358m.g Citrus clementina HOM05D000045 ORTHO05D000067 2.9e-06 56.2 92 37.0
TPR.G28050 Trifolium pratense HOM05D000045 ORTHO05D000001 6.6e-06 55.1 83 42.2


User provided reference genes

Program Settings