Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029204 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 0.0e+00 1503.4 755 100.0
CSS0048337 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 0.0e+00 1253.8 799 83.1
CSS0000087 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 0.0e+00 1245.7 798 82.5
Dinv23402 Davidia involucrata HOM05D006132 ORTHO05D007305 2.7e-303 1045.0 800 69.5
Dinv02537 Davidia involucrata HOM05D006132 ORTHO05D007305 3.9e-302 1041.2 800 69.4
Actinidia01213 Actinidia chinensis HOM05D006132 ORTHO05D007305 7.4e-293 1010.4 792 68.3
vmacro00180 Vaccinium macrocarpon HOM05D006132 ORTHO05D007305 7.7e-290 1000.3 800 67.8
Rhsim11G0049000 Rhododendron simsii HOM05D006132 ORTHO05D007305 1.1e-269 933.3 935 58.0
QL12p040855 Quercus lobata HOM05D006132 ORTHO05D007305 5.9e-266 921.0 800 61.9
GSVIVG01035326001 Vitis vinifera HOM05D006132 ORTHO05D007305 5.9e-266 921.0 786 63.5
CiPaw.07G201400 Carya illinoinensis HOM05D006132 ORTHO05D007305 3.0e-262 908.7 799 60.8
Lj8C561G12 Lonicera japonica HOM05D006132 ORTHO05D007305 8.8e-262 907.1 805 61.9
Haze_01967 Corylus avellana HOM05D006132 ORTHO05D007305 5.7e-261 904.4 799 60.8
TAR636G1718 Trochodendron aralioides HOM05D006132 ORTHO05D007305 5.5e-256 887.9 803 60.1
Prupe.1G443500 Prunus persica HOM05D006132 ORTHO05D007305 5.7e-253 877.9 799 60.2
Nn8g39007 Nelumbo nucifera HOM05D006132 ORTHO05D007305 1.4e-251 873.2 801 59.9
RcHm_v2.0_Chr6g0306811 Rosa chinensis HOM05D006132 ORTHO05D007305 3.3e-248 862.1 800 59.4
FvH4_2g35140 Fragaria vesca HOM05D006132 ORTHO05D007305 1.6e-247 859.8 800 59.1
MD08G1108900 Malus domestica HOM05D006132 ORTHO05D007305 1.4e-246 856.7 800 59.4
Atru.chr7.2044 Acer truncatum HOM05D006132 ORTHO05D007305 1.5e-245 853.2 797 58.2
Ciclev10010526m.g Citrus clementina HOM05D006132 ORTHO05D007305 9.8e-245 850.5 796 58.8
Manes.03G057600 Manihot esculenta HOM05D006132 ORTHO05D007305 6.4e-244 847.8 795 58.0
Cc08_g10020 Coffea canephora HOM05D006132 ORTHO05D007305 8.3e-244 847.4 801 57.8
Thecc.09G049200 Theobroma cacao HOM05D006132 ORTHO05D007305 1.6e-242 843.2 798 58.3
MSTRG.25925 Avicennia marina HOM05D006132 ORTHO05D007305 1.7e-241 839.7 821 58.3
Migut.A00170 Erythranthe guttata HOM05D006132 ORTHO05D007305 3.3e-240 835.5 799 57.6
Sopen08g019670 Solanum pennellii HOM05D006132 ORTHO05D007305 3.6e-239 832.0 809 57.5
Potri.018G057900 Populus trichocarpa HOM05D006132 ORTHO05D007305 5.8e-237 824.7 794 57.2
TWI34G0160 Tripterygium wilfordii HOM05D006132 ORTHO05D007305 2.2e-236 822.8 798 57.3
COL.COLO4_21010 Corchorus olitorius HOM05D006132 ORTHO05D007305 6.4e-236 821.2 796 56.2
CAN.G9.6 Capsicum annuum HOM05D006132 ORTHO05D007305 8.3e-236 820.8 809 56.9
Glyma.06G088900 Glycine max HOM05D006132 ORTHO05D007305 1.0e-233 813.9 798 56.1
Ca_15565_v3 Cicer arietinum L. HOM05D006132 ORTHO05D007305 1.7e-233 813.1 799 56.2
Glyma.04G087200 Glycine max HOM05D006132 ORTHO05D007305 3.0e-233 812.4 798 56.3
Lalb_Chr08g0242871 Lupinus albus HOM05D006132 ORTHO05D007305 3.9e-233 812.0 799 55.6
Phvul.009G112700 Phaseolus vulgaris HOM05D006132 ORTHO05D007305 1.2e-231 807.0 799 55.4
Gohir.A07G022180 Gossypium hirsutum HOM05D006132 ORTHO05D007305 1.6e-231 806.6 801 55.4
Gorai.001G024600 Gossypium raimondii HOM05D006132 ORTHO05D007305 3.6e-231 805.4 801 55.4
VMungo1309G3161 Vigna mungo HOM05D006132 ORTHO05D007305 6.2e-231 804.7 799 55.4
Medtr3g110417 Medicago truncatula HOM05D006132 ORTHO05D007305 1.5e-229 800.0 799 55.1
CsaV3_3G048410 Cucumis sativus L. HOM05D006132 ORTHO05D007305 5.8e-229 798.1 805 54.8
ECA240G1625 Erigeron canadensis HOM05D006132 ORTHO05D007305 3.7e-228 795.4 709 60.9
Sed0028022 Sechium edule HOM05D006132 ORTHO05D007305 3.7e-228 795.4 799 55.2
ClCG11G015000 Citrullus lanatus HOM05D006132 ORTHO05D007305 1.1e-227 793.9 818 54.4
MELO3C003478.2 Cucumis melo HOM05D006132 ORTHO05D007305 7.1e-227 791.2 797 54.7
PGR031G1631 Punica granatum HOM05D006132 ORTHO05D007305 3.5e-226 788.9 796 55.3
Hund19486 Selenicereus undatus HOM05D006132 ORTHO05D007305 1.7e-225 786.6 687 60.6
Eucgr.C00619 Eucalyptus grandis HOM05D006132 ORTHO05D007305 2.3e-225 786.2 796 55.3
Psat0s3156g0040 Pisum sativum HOM05D006132 ORTHO05D007305 3.0e-225 785.8 799 54.7
PSO210G2191 Papaver somniferum HOM05D006132 ORTHO05D007305 6.6e-225 784.6 792 55.1
DCAR_007699 Daucus carota HOM05D006132 ORTHO05D007305 2.5e-224 782.7 846 53.1
Lj1g0008631 Lotus japonicus HOM05D006132 ORTHO05D007305 3.3e-224 782.3 799 54.6
PSO210G7354 Papaver somniferum HOM05D006132 ORTHO05D007305 2.8e-223 779.2 792 55.2
arahy.Tifrunner.gnm1.ann1.GM174E Arachis hypogaea HOM05D006132 ORTHO05D007305 6.2e-223 778.1 846 52.2
Aqoxy7G03955 Aquilegia oxysepala HOM05D006132 ORTHO05D007305 5.2e-222 775.0 799 54.9
AUR62040212 Chenopodium quinoa HOM05D006132 ORTHO05D007305 2.6e-221 772.7 795 54.2
Sc09g0009530 Simmondsia chinensis HOM05D006132 ORTHO05D007305 7.6e-221 771.2 801 55.1
Oeu038827.1 Olea europaea HOM05D006132 ORTHO05D007305 2.2e-220 769.6 732 57.4
Gohir.D07G023900 Gossypium hirsutum HOM05D006132 ORTHO05D007305 6.4e-220 768.1 796 54.4
HanXRQChr03g0077991 Helianthus annuus HOM05D006132 ORTHO05D007305 6.4e-220 768.1 678 61.2
Lsat_1_v5_gn_3_109020 Lactuca sativa HOM05D006132 ORTHO05D007305 3.2e-219 765.8 681 61.5
AUR62009214 Chenopodium quinoa HOM05D006132 ORTHO05D007305 7.8e-218 761.1 803 53.5
Duzib168G1248 Durio zibethinus HOM05D006132 ORTHO05D007305 3.9e-217 758.8 798 54.0
MBI01_g01249_MAGBIO Magnolia biondii HOM05D006132 ORTHO05D007305 4.3e-216 755.4 802 52.7
SGA_v2.0_scaffold103G30057 Striga asiatica HOM05D006132 ORTHO05D007305 5.8e-213 745.0 801 53.9
Carub.0007s0767 Capsella rubella HOM05D006132 ORTHO05D007305 1.3e-212 743.8 685 58.2
Ah.11g044450 Amaranthus hybridus HOM05D006132 ORTHO05D007305 3.8e-212 742.3 794 52.3
THA.LOC104818581 Tarenaya hassleriana HOM05D006132 ORTHO05D007305 4.9e-212 741.9 742 55.4
AT4G32820 Arabidopsis thaliana HOM05D006132 ORTHO05D007305 4.2e-211 738.8 685 57.8
AL7G18910 Arabidopsis lyrata HOM05D006132 ORTHO05D007305 1.2e-210 737.3 672 58.2
SalBow4G1475 Salvia bowleyana HOM05D006132 ORTHO05D007305 1.6e-210 736.9 789 54.8
TPR.G12374 Trifolium pratense HOM05D006132 ORTHO05D007305 2.7e-210 736.1 760 55.1
EL10Ac2g03960 Beta vulgaris HOM05D006132 ORTHO05D007305 1.9e-208 729.9 827 50.1
Thhalv10026823m.g Eutrema salsugineum HOM05D006132 ORTHO05D007305 1.9e-208 729.9 685 56.9
Sp7g30590 Schrenkiella parvula HOM05D006132 ORTHO05D007305 7.3e-208 728.0 687 56.8
C01p06070 Brassica napus HOM05D006132 ORTHO05D007305 5.8e-205 718.4 685 55.9
A01p05470 Brassica napus HOM05D006132 ORTHO05D007305 9.9e-205 717.6 678 56.5
BcaC09g52078 Brassica carinata HOM05D006132 ORTHO05D007305 6.4e-204 714.9 678 56.2
Aa31sc208G40 Aethionema arabicum HOM05D006132 ORTHO05D007305 1.9e-203 713.4 699 55.8
BolC1t00600H Brassica oleracea HOM05D006132 ORTHO05D007305 1.2e-202 710.7 702 55.0
Aa31LG5G17300 Aethionema arabicum HOM05D006132 ORTHO05D007305 2.7e-202 709.5 699 55.8
BraA01t00520Z Brassica rapa HOM05D006132 ORTHO05D007305 2.7e-202 709.5 695 55.4
arahy.Tifrunner.gnm1.ann1.XPLI6K Arachis hypogaea HOM05D006132 ORTHO05D007305 3.9e-201 705.7 798 51.0
Nitab4.5_0000318g0080 Nicotiana tabacum HOM05D006132 ORTHO05D007305 5.1e-201 705.3 615 62.4
Cpa.g.sc7.235 Carica papaya HOM05D006132 ORTHO05D007305 1.9e-200 703.4 701 55.6
ATR0815G026 Amborella trichopoda HOM05D006132 ORTHO05D007305 1.3e-193 680.6 831 46.2
Solyc08g066010.2 Solanum lycopersicum HOM05D006132 ORTHO05D007305 8.1e-191 671.4 659 57.7
HPP92_019594 Vanilla planifolia HOM05D006132 ORTHO05D007305 1.2e-186 657.5 702 50.6
Peaxi162Scf00840g00429 Petunia axillaris HOM05D006132 ORTHO05D007305 1.3e-175 620.9 681 54.8
unitig_0.g2566 Utricularia gibba HOM05D006132 ORTHO05D007305 3.6e-170 602.8 675 49.6
SMO365G0056 Selaginella moellendorffii HOM05D006132 ORTHO05D007305 4.4e-144 516.2 671 44.1
Pp3c4_1880 Physcomitrium patens HOM05D006132 ORTHO05D007305 1.4e-142 511.1 796 40.1
FAN20G0110 Fragaria x ananassa HOM05D006132 ORTHO05D007305 3.0e-137 493.4 433 60.7
Mapoly0021s0014 Marchantia polymorpha HOM05D006132 ORTHO05D007305 1.7e-135 487.6 766 39.3
AagrBONN_evm.TU.Sc2ySwM_344.875 Anthoceros agrestis HOM05D006132 ORTHO05D007305 2.6e-128 463.8 712 38.6
Psat4g077080 Pisum sativum HOM05D006132 ORTHO05D007305 2.5e-123 447.2 525 51.4
CARHR240810 Cardamine hirsuta HOM05D006132 ORTHO05D007305 4.0e-121 439.9 466 53.0
CBR_g22939 Chara braunii HOM05D006132 ORTHO05D000048 1.2e-120 438.3 758 37.6
SHI18807 Sapria himalayana HOM05D006132 ORTHO05D007305 1.6e-117 427.9 939 33.0
Psat4g077000 Pisum sativum HOM05D006132 ORTHO05D007305 3.3e-107 393.7 465 50.1
Nitab4.5_0002021g0060 Nicotiana tabacum HOM05D006132 ORTHO05D007305 1.3e-50 205.7 202 55.9
Peaxi162Scf00840g00428 Petunia axillaris HOM05D006132 ORTHO05D007305 2.8e-42 177.9 145 63.4
Solyc08g066000.2 Solanum lycopersicum HOM05D006132 ORTHO05D007305 1.4e-41 175.6 150 59.3
Psat2g119040 Pisum sativum HOM05D006132 ORTHO05D007305 4.1e-41 174.1 198 52.5
Lsat_1_v5_gn_0_25341 Lactuca sativa HOM05D006132 ORTHO05D007305 2.5e-30 138.3 209 42.1
SHI18803 Sapria himalayana HOM05D006132 ORTHO05D007305 6.6e-23 113.6 97 60.8
Sabra06G0183100 Salix brachista HOM05D006132 ORTHO05D007305 4.5e-16 90.9 116 44.8
MCO10G298 Micromonas commoda HOM05D006132 ORTHO05D007305 4.4e-11 74.3 431 24.6
Zm00001eb053290 Zea mays HOM05D006132 ORTHO05D007305 1.4e-09 69.3 87 43.7
Glyma.11G174000 Glycine max HOM05D006132 ORTHO05D007305 3.5e-08 64.7 66 42.4


User provided reference genes

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