Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029156 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 1.6e-30 136.3 124 100.0
CSS0036288 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 1.3e-29 133.3 124 98.4
Thecc.01G231600 Theobroma cacao HOM05D007427 ORTHO05D006413 5.0e-13 78.2 60 66.7
CiPaw.03G152700 Carya illinoinensis HOM05D007427 ORTHO05D006413 1.1e-12 77.0 60 66.7
Actinidia23744 Actinidia chinensis HOM05D007427 ORTHO05D006413 1.5e-12 76.6 59 64.4
QL09p044390 Quercus lobata HOM05D007427 ORTHO05D006413 1.2e-11 73.6 60 66.7
COL.COLO4_17317 Corchorus olitorius HOM05D007427 ORTHO05D006413 2.1e-11 72.8 60 63.3
Glyma.03G170800 Glycine max HOM05D007427 ORTHO05D006413 2.7e-11 72.4 60 63.3
CiPaw.04G107800 Carya illinoinensis HOM05D007427 ORTHO05D006413 8.0e-11 70.9 58 65.5
CANSAT01G2272 Cannabis sativa HOM05D007427 ORTHO05D006413 1.0e-10 70.5 61 60.7
Hma1.2p1_1858F.1_g305540 Hydrangea macrophylla HOM05D007427 ORTHO05D006413 1.0e-10 70.5 58 56.9
Duzib211G0080 Durio zibethinus HOM05D007427 ORTHO05D006413 1.4e-10 70.1 57 63.2
Glyma.19G171900 Glycine max HOM05D007427 ORTHO05D006413 1.4e-10 70.1 61 65.6
Duzib138G0914 Durio zibethinus HOM05D007427 ORTHO05D006413 2.3e-10 69.3 60 65.0
Thecc.01G231700 Theobroma cacao HOM05D007427 ORTHO05D006413 3.0e-10 68.9 69 58.0
Rhsim13G0042300 Rhododendron simsii HOM05D007427 ORTHO05D006413 4.0e-10 68.6 60 60.0
CANSAT01G2831 Cannabis sativa HOM05D007427 ORTHO05D006413 6.8e-10 67.8 56 58.9
COL.COLO4_28358 Corchorus olitorius HOM05D007427 ORTHO05D006413 6.8e-10 67.8 65 55.4
Haze_24760 Corylus avellana HOM05D007427 ORTHO05D006413 6.8e-10 67.8 60 63.3
Gohir.A07G154400 Gossypium hirsutum HOM05D007427 ORTHO05D006413 8.8e-10 67.4 53 66.0
Gohir.D07G160800 Gossypium hirsutum HOM05D007427 ORTHO05D006413 8.8e-10 67.4 53 66.0
Gorai.001G183700 Gossypium raimondii HOM05D007427 ORTHO05D006413 8.8e-10 67.4 53 66.0
Dinv19234 Davidia involucrata HOM05D007427 ORTHO05D006413 1.2e-09 67.0 58 53.4
Glyma.03G170900 Glycine max HOM05D007427 ORTHO05D006413 1.2e-09 67.0 60 60.0
Lj1g0018605 Lotus japonicus HOM05D007427 ORTHO05D006413 1.2e-09 67.0 59 61.0
Ciclev10022672m.g Citrus clementina HOM05D007427 ORTHO05D006413 1.5e-09 66.6 73 50.7
Ciclev10022773m.g Citrus clementina HOM05D007427 ORTHO05D006413 1.5e-09 66.6 73 49.3
CiPaw.04G107700 Carya illinoinensis HOM05D007427 ORTHO05D006413 2.6e-09 65.9 58 58.6
FAN27G1788 Fragaria x ananassa HOM05D007427 ORTHO05D006413 4.4e-09 65.1 60 56.7
Gohir.A07G154300 Gossypium hirsutum HOM05D007427 ORTHO05D006413 4.4e-09 65.1 73 50.7
Prupe.8G208000 Prunus persica HOM05D007427 ORTHO05D006413 4.4e-09 65.1 60 65.0
FvH4_2g19680 Fragaria vesca HOM05D007427 ORTHO05D006413 5.7e-09 64.7 60 56.7
FAN24G2151 Fragaria x ananassa HOM05D007427 ORTHO05D006413 5.7e-09 64.7 60 56.7
Gohir.D07G160600 Gossypium hirsutum HOM05D007427 ORTHO05D006413 5.7e-09 64.7 73 50.7
FAN15G2923 Fragaria x ananassa HOM05D007427 ORTHO05D006413 7.5e-09 64.3 60 56.7
Sabra02G0191700 Salix brachista HOM05D007427 ORTHO05D006413 7.5e-09 64.3 66 54.5
Phvul.001G168900 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 9.8e-09 63.9 55 63.6
VMungo1383G3325 Vigna mungo HOM05D007427 ORTHO05D006413 9.8e-09 63.9 61 63.9
Lalb_Chr01g0019331 Lupinus albus HOM05D007427 ORTHO05D006413 1.3e-08 63.5 60 55.0
QL09p044388 Quercus lobata HOM05D007427 ORTHO05D006413 1.7e-08 63.2 59 61.0
MD05G1181500 Malus domestica HOM05D007427 ORTHO05D006413 2.2e-08 62.8 60 63.3
arahy.Tifrunner.gnm1.ann1.KG3A2Z Arachis hypogaea HOM05D007427 ORTHO05D006413 3.7e-08 62.0 61 55.7
Cpa.g.sc8.193 Carica papaya HOM05D007427 ORTHO05D006413 3.7e-08 62.0 58 56.9
Glyma.19G171800 Glycine max HOM05D007427 ORTHO05D006413 3.7e-08 62.0 60 53.3
RcHm_v2.0_Chr6g0285411 Rosa chinensis HOM05D007427 ORTHO05D006413 3.7e-08 62.0 61 63.9
Gohir.A08G193800 Gossypium hirsutum HOM05D007427 ORTHO05D006413 8.3e-08 60.8 71 46.5
Nitab4.5_0001740g0060 Nicotiana tabacum HOM05D007427 ORTHO05D006413 1.1e-07 60.5 60 55.0
SGA_v2.0_scaffold42G16152 Striga asiatica HOM05D007427 ORTHO05D006413 1.1e-07 60.5 66 56.1
CsaV3_3G039490 Cucumis sativus L. HOM05D007427 ORTHO05D006413 1.4e-07 60.1 64 50.0
Nn3g19877 Nelumbo nucifera HOM05D007427 ORTHO05D006413 1.4e-07 60.1 57 61.4
Sed0020523 Sechium edule HOM05D007427 ORTHO05D006413 1.4e-07 60.1 60 56.7
Cc01_g17390 Coffea canephora HOM05D007427 ORTHO05D006413 1.8e-07 59.7 58 55.2
MELO3C012793.2 Cucumis melo HOM05D007427 ORTHO05D006413 1.8e-07 59.7 56 53.6
Gorai.004G224800 Gossypium raimondii HOM05D007427 ORTHO05D006413 1.8e-07 59.7 71 45.1
Potri.002G252400 Populus trichocarpa HOM05D007427 ORTHO05D006413 1.8e-07 59.7 68 50.0
Duzib138G0919 Durio zibethinus HOM05D007427 ORTHO05D006413 2.4e-07 59.3 81 43.2
PSO017G4218 Papaver somniferum HOM05D007427 ORTHO05D006413 3.1e-07 58.9 64 53.1
TAR362G1030 Trochodendron aralioides HOM05D007427 ORTHO05D006413 3.1e-07 58.9 70 52.9
ClCG09G009340 Citrullus lanatus HOM05D007427 ORTHO05D006413 4.1e-07 58.5 55 58.2
MELO3C024163.2 Cucumis melo HOM05D007427 ORTHO05D006413 4.1e-07 58.5 60 53.3
Gohir.D08G211500 Gossypium hirsutum HOM05D007427 ORTHO05D006413 4.1e-07 58.5 71 45.1
Lj1g0008336 Lotus japonicus HOM05D007427 ORTHO05D006413 4.1e-07 58.5 60 50.0
Lalb_Chr25g0289621 Lupinus albus HOM05D007427 ORTHO05D006413 5.4e-07 58.2 59 52.5
Medtr7g099670 Medicago truncatula HOM05D007427 ORTHO05D006413 5.4e-07 58.2 60 55.0
PSO063G2436 Papaver somniferum HOM05D007427 ORTHO05D006413 7.0e-07 57.8 64 51.6
CsaV3_7G025650 Cucumis sativus L. HOM05D007427 ORTHO05D006413 9.2e-07 57.4 60 51.7
MSTRG.21440 Avicennia marina HOM05D007427 ORTHO05D006413 1.2e-06 57.0 59 50.8
Gorai.001G183600 Gossypium raimondii HOM05D007427 ORTHO05D006413 1.2e-06 57.0 68 48.5
ClCG09G009270 Citrullus lanatus HOM05D007427 ORTHO05D006413 2.0e-06 56.2 55 56.4
Migut.N02250 Erythranthe guttata HOM05D007427 ORTHO05D006413 2.0e-06 56.2 59 49.2
Ca_08774_v3 Cicer arietinum L. HOM05D007427 ORTHO05D006413 2.7e-06 55.8 53 54.7
Glyma.10G043100 Glycine max HOM05D007427 ORTHO05D006413 2.7e-06 55.8 61 59.0
Glyma.13G130600 Glycine max HOM05D007427 ORTHO05D006413 3.5e-06 55.5 57 57.9
Atru.chr5.1886 Acer truncatum HOM05D007427 ORTHO05D006413 5.9e-06 54.7 70 50.0
ECA236G2240 Erigeron canadensis HOM05D007427 ORTHO05D006413 5.9e-06 54.7 52 53.8
ECA247G2869 Erigeron canadensis HOM05D047643 ORTHO05D006413 5.9e-06 54.7 71 42.3
Medtr1g069085 Medicago truncatula HOM05D007427 ORTHO05D006413 7.7e-06 54.3 60 55.0


User provided reference genes

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