Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.6e-59 232.6 122 100.0
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.0e-55 218.0 122 95.1
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.0e-55 218.0 122 95.1
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 5.6e-49 197.6 123 85.4
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 9.5e-49 196.8 121 82.6
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 8.0e-48 193.7 123 82.9
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 3.1e-47 191.8 119 84.0
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 4.0e-47 191.4 122 81.1
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.4e-44 183.0 122 77.0
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.4e-44 183.0 122 77.0
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 3.5e-43 178.3 116 77.6
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 6.0e-43 177.6 120 78.3
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 6.0e-43 177.6 120 78.3
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 6.0e-43 177.6 124 76.6
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 7.8e-43 177.2 114 79.8
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.3e-42 176.4 120 78.3
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 1.3e-42 176.4 120 78.3
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 2.3e-42 175.6 120 76.7
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 6.6e-42 174.1 120 77.5
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 2.5e-41 172.2 114 75.4
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 2.5e-41 172.2 114 77.2
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 2.5e-41 172.2 112 78.6
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 4.3e-41 171.4 121 76.0
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 4.3e-41 171.4 123 75.6
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 4.3e-41 171.4 120 76.7
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 7.3e-41 170.6 122 72.1
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 9.5e-41 170.2 112 77.7
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 1.2e-40 169.9 114 78.1
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 1.2e-40 169.9 114 77.2
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 1.6e-40 169.5 123 71.5
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.6e-40 169.5 120 76.7
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.6e-40 169.5 120 76.7
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 1.6e-40 169.5 115 76.5
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 2.1e-40 169.1 122 70.5
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 2.1e-40 169.1 122 71.3
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 2.8e-40 168.7 119 75.6
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 3.6e-40 168.3 116 75.9
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 3.6e-40 168.3 116 73.3
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 1.1e-39 166.8 120 72.5
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 1.4e-39 166.4 113 77.9
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 1.8e-39 166.0 118 73.7
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 2.3e-39 165.6 115 74.8
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 6.8e-39 164.1 117 73.5
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 6.8e-39 164.1 121 71.9
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 6.8e-39 164.1 112 74.1
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 1.2e-38 163.3 126 67.5
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 1.2e-38 163.3 113 73.5
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 1.2e-38 163.3 122 67.2
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 1.5e-38 162.9 122 68.9
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 2.0e-38 162.5 120 70.0
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 2.6e-38 162.2 122 69.7
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 3.4e-38 161.8 121 71.9
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 3.4e-38 161.8 115 73.9
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 7.6e-38 160.6 117 68.4
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 7.6e-38 160.6 121 69.4
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 9.9e-38 160.2 119 68.1
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 2.9e-37 158.7 120 71.7
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 3.7e-37 158.3 112 74.1
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 3.7e-37 158.3 122 69.7
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 3.7e-37 158.3 122 70.5
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 3.7e-37 158.3 115 72.2
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 4.9e-37 157.9 115 72.2
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 4.9e-37 157.9 116 69.8
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 1.4e-36 156.4 109 72.5
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 1.9e-36 156.0 122 68.0
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 3.2e-36 155.2 121 69.4
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 7.1e-36 154.1 109 74.3
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 1.2e-35 153.3 122 66.4
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 1.6e-35 152.9 118 66.1
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 2.1e-35 152.5 118 69.5
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 3.5e-35 151.8 113 69.9
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 3.9e-34 148.3 109 68.8
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 1.9e-33 146.0 119 63.9
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 3.3e-33 145.2 109 67.0
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 9.6e-33 143.7 119 62.2
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.2e-32 143.3 102 69.6
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 6.2e-32 141.0 115 63.5
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.4e-31 139.8 116 63.8
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 6.8e-31 137.5 121 62.0
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 2.6e-30 135.6 94 70.2
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 5.8e-30 134.4 104 65.4
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 5.8e-30 134.4 104 64.4
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 5.8e-30 134.4 113 63.7
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 1.3e-29 133.3 104 64.4
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 1.7e-29 132.9 96 70.8
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 2.2e-29 132.5 113 61.1
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.9e-29 132.1 78 85.9
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.9e-29 132.1 78 85.9
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 6.4e-29 131.0 78 85.9
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 1.4e-28 129.8 108 63.9
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 4.2e-28 128.3 121 57.9
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.7e-26 122.9 93 68.8
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 3.9e-26 121.7 110 60.0
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 1.1e-25 120.2 76 81.6
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 1.9e-25 119.4 76 81.6
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 2.5e-25 119.0 113 55.8
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 3.3e-25 118.6 129 54.3
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 5.6e-25 117.9 121 57.0
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.6e-24 116.3 116 55.2
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 1.6e-24 116.3 116 55.2
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 1.8e-23 112.8 120 54.2
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 2.4e-23 112.5 117 53.8
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.4e-23 112.5 116 55.2
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 3.1e-23 112.1 92 58.7
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 7.6e-22 107.5 113 53.1
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 3.8e-21 105.1 116 51.7
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 3.8e-21 105.1 95 57.9
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 4.6e-19 98.2 74 67.6
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 1.0e-18 97.1 102 47.1
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 1.7e-18 96.3 107 51.4
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 2.3e-18 95.9 72 68.1
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 3.9e-18 95.1 73 67.1
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 3.9e-18 95.1 73 67.1
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 3.9e-18 95.1 89 66.3
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 3.9e-18 95.1 71 67.6
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 8.7e-18 94.0 71 67.6
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 8.7e-18 94.0 71 67.6
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 1.1e-17 93.6 112 47.3
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 1.1e-17 93.6 73 65.8
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 3.3e-17 92.0 107 49.5
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 4.3e-17 91.7 59 76.3
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 4.3e-17 91.7 59 76.3
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 9.6e-17 90.5 106 45.3
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 8.1e-16 87.4 102 48.0
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 2.0e-14 82.8 72 52.8
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 2.0e-14 82.8 98 41.8
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 2.7e-11 72.4 62 61.3
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 1.5e-09 66.6 43 79.1
FAN03G1360 Fragaria x ananassa HOM05D006288 ORTHO05D007416 4.3e-09 65.1 55 58.2
FAN06G1951 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.1e-07 58.9 116 36.2


User provided reference genes

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