Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 8.5e-171 603.6 307 100.0
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.7e-156 555.4 337 86.9
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 3.5e-100 369.0 315 66.0
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 2.4e-85 319.7 319 59.2
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 9.1e-64 248.1 288 54.5
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 3.8e-62 242.7 255 58.4
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 1.3e-57 227.6 269 54.6
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 3.7e-57 226.1 255 56.5
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 5.0e-54 215.7 317 46.1
CSS0034917 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.2e-52 211.1 111 95.5
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 4.7e-52 209.1 305 48.5
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 7.9e-52 208.4 305 47.5
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 1.5e-50 204.1 281 49.1
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 1.1e-48 198.0 342 45.0
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 2.0e-39 167.2 293 42.7
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 8.5e-38 161.8 331 41.4
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 5.5e-37 159.1 188 52.1
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 7.2e-37 158.7 309 42.4
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 1.2e-34 151.4 326 41.7
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 1.2e-34 151.4 350 37.7
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 4.4e-34 149.4 338 38.2
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 1.7e-33 147.5 364 37.4
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 1.4e-32 144.4 256 42.6
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 4.1e-32 142.9 315 39.4
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 3.5e-31 139.8 291 39.2
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 2.9e-30 136.7 296 37.8
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 2.9e-30 136.7 311 40.8
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 3.8e-30 136.3 309 37.5
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 1.1e-29 134.8 255 40.0
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 5.5e-29 132.5 339 37.2
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 9.5e-29 131.7 244 42.2
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 9.5e-29 131.7 310 39.4
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 1.6e-28 131.0 273 39.6
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 1.6e-28 131.0 282 39.4
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 2.1e-28 130.6 255 40.4
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 1.0e-27 128.3 286 38.5
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 1.4e-27 127.9 219 43.4
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 2.3e-27 127.1 224 43.3
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 3.0e-27 126.7 295 38.6
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 5.2e-27 125.9 236 41.1
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 5.2e-27 125.9 297 36.4
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 1.5e-26 124.4 343 36.4
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 9.8e-26 121.7 320 37.8
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 3.7e-25 119.8 220 39.5
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 4.9e-25 119.4 262 39.3
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 4.9e-25 119.4 218 41.7
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 6.3e-25 119.0 221 41.6
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 8.3e-25 118.6 221 41.6
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 1.1e-24 118.2 202 41.1
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 3.1e-24 116.7 318 35.8
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 7.0e-24 115.5 285 37.2
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 7.0e-24 115.5 226 40.7
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 9.2e-24 115.2 254 39.8
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 1.2e-23 114.8 239 38.1
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 1.6e-23 114.4 219 37.9
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 3.5e-23 113.2 254 39.4
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 5.9e-23 112.5 286 36.7
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 7.8e-23 112.1 277 38.3
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 8.6e-22 108.6 310 35.8
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 1.9e-21 107.5 321 33.3
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 3.3e-21 106.7 289 34.3
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 3.3e-21 106.7 270 33.7
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 4.3e-21 106.3 197 44.2
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 7.3e-21 105.5 293 33.4
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 1.6e-20 104.4 204 40.2
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 2.8e-20 103.6 346 33.5
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 8.0e-20 102.1 185 39.5
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 1.0e-19 101.7 309 33.0
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 2.3e-19 100.5 233 36.1
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 5.2e-19 99.4 250 36.0
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 6.8e-19 99.0 350 33.4
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 1.2e-18 98.2 304 34.5
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 1.5e-18 97.8 256 37.5
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 2.6e-18 97.1 208 38.0
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 4.4e-18 96.3 290 34.1
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 5.7e-18 95.9 254 35.0
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 2.2e-17 94.0 302 31.5
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 4.9e-17 92.8 266 33.1
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 2.4e-16 90.5 274 31.8
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 4.1e-16 89.7 279 34.1
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 1.2e-15 88.2 161 41.0
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 2.7e-15 87.0 160 41.2
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 2.7e-15 87.0 205 41.0
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 4.6e-15 86.3 279 32.3
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 7.8e-15 85.5 245 32.7
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 3.9e-14 83.2 179 37.4
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 5.0e-14 82.8 243 34.6
BcaC08g47058 Brassica carinata HOM05D010473 ORTHO05D007577 8.6e-14 82.0 260 31.9
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 1.9e-13 80.9 235 34.0
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 3.3e-13 80.1 323 30.7
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 7.3e-13 79.0 287 32.1
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 1.6e-12 77.8 195 36.4
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 2.1e-12 77.4 179 35.8
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 2.1e-12 77.4 101 48.5
Lsat_1_v5_gn_2_9361 Lactuca sativa HOM05D037282 ORTHO05D035104 2.8e-12 77.0 108 45.4
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 6.2e-12 75.9 300 32.0
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 1.4e-11 74.7 178 36.0
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 1.4e-11 74.7 163 37.4
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 2.3e-11 73.9 109 45.9
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 4.0e-11 73.2 174 35.6
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 1.2e-10 71.6 109 45.9
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 3.4e-10 70.1 115 37.4
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 3.4e-10 70.1 126 42.1
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 3.4e-10 70.1 227 32.2
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 6.4e-09 65.9 209 31.1
C06p49680 Brassica napus HOM05D010473 ORTHO05D007577 4.1e-08 63.2 269 25.7
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 1.6e-07 61.2 166 34.9
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 1.6e-07 61.2 183 33.9
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 4.6e-07 59.7 125 37.6


User provided reference genes

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