Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 2.3e-34 148.3 72 100.0
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 1.3e-29 132.5 72 81.9
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 6.5e-29 130.2 72 80.6
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 6.5e-29 130.2 72 80.6
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 8.4e-29 129.8 70 85.7
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 8.4e-29 129.8 72 84.7
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 3.2e-28 127.9 72 77.8
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 5.5e-28 127.1 72 83.3
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 2.7e-27 124.8 69 79.7
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 4.6e-27 124.0 72 81.9
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 4.6e-27 124.0 72 81.9
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 4.6e-27 124.0 72 81.9
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 4.6e-27 124.0 72 81.9
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 6.0e-27 123.6 72 81.9
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.0e-26 122.9 72 81.9
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 1.0e-26 122.9 72 79.2
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 1.3e-26 122.5 72 79.2
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 1.3e-26 122.5 72 80.6
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.3e-26 122.5 72 80.6
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 1.8e-26 122.1 72 79.2
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 2.3e-26 121.7 71 80.3
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 3.0e-26 121.3 72 80.6
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 3.0e-26 121.3 72 80.6
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 3.9e-26 120.9 72 79.2
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 3.9e-26 120.9 72 77.8
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 5.1e-26 120.6 72 79.2
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 5.1e-26 120.6 72 76.4
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 6.7e-26 120.2 72 76.4
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 76.4
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 79.2
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 1.1e-25 119.4 68 79.4
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 1.5e-25 119.0 68 79.4
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 76.4
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 1.9e-25 118.6 72 76.4
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 1.9e-25 118.6 68 77.9
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 1.9e-25 118.6 72 77.8
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 1.9e-25 118.6 70 80.0
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 1.9e-25 118.6 72 77.8
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 1.9e-25 118.6 72 77.8
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 2.5e-25 118.2 68 77.9
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 2.5e-25 118.2 68 77.9
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 2.5e-25 118.2 72 77.8
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 2.5e-25 118.2 72 80.6
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 2.5e-25 118.2 72 77.8
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 3.3e-25 117.9 72 76.4
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 4.3e-25 117.5 72 75.0
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 4.3e-25 117.5 72 75.0
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 5.7e-25 117.1 69 72.5
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 5.7e-25 117.1 72 73.6
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 7.4e-25 116.7 68 75.0
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 9.6e-25 116.3 70 77.1
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 9.6e-25 116.3 72 75.0
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 1.3e-24 115.9 68 75.0
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 1.3e-24 115.9 68 75.0
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 1.6e-24 115.5 73 76.7
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.6e-24 115.5 69 78.3
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.6e-24 115.5 69 78.3
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 1.6e-24 115.5 72 75.0
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 1.6e-24 115.5 71 74.6
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 2.1e-24 115.2 72 75.0
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 4.8e-24 114.0 75 74.7
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 6.2e-24 113.6 67 82.1
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 1.1e-23 112.8 73 75.3
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 1.4e-23 112.5 68 73.5
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 1.8e-23 112.1 71 71.8
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 2.4e-23 111.7 71 74.6
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 3.1e-23 111.3 68 72.1
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 4.0e-23 110.9 82 69.5
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 9.0e-23 109.8 66 80.3
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 2.6e-22 108.2 72 68.1
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 5.8e-22 107.1 65 72.3
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 1.7e-21 105.5 71 71.8
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 2.9e-21 104.8 82 64.6
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 3.8e-21 104.4 67 73.1
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 1.1e-20 102.8 66 71.2
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.4e-20 102.4 66 71.2
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 2.5e-20 101.7 70 71.4
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 4.2e-20 100.9 66 69.7
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 5.5e-20 100.5 88 62.5
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 7.1e-20 100.1 61 73.8
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 9.3e-20 99.8 66 68.2
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 1.2e-19 99.4 72 69.4
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 3.5e-19 97.8 95 54.7
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 3.9e-18 94.4 52 84.6
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 3.9e-18 94.4 72 62.5
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 2.5e-17 91.7 70 67.1
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 2.5e-17 91.7 72 65.3
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 3.3e-17 91.3 63 61.9
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 3.3e-17 91.3 70 58.6
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 5.7e-17 90.5 131 42.7
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 7.4e-17 90.1 137 40.9
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 6.3e-16 87.0 51 74.5
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 5.9e-14 80.5 50 76.0
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 1.9e-12 75.5 68 55.9
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 2.5e-12 75.1 166 34.3
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 5.5e-12 73.9 42 81.0
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 9.4e-12 73.2 42 78.6
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 2.7e-11 71.6 44 75.0
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 2.3e-10 68.6 41 75.6
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 5.1e-10 67.4 42 76.2
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 6.7e-10 67.0 42 73.8
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 8.8e-10 66.6 40 77.5
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 8.8e-10 66.6 41 75.6
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 1.5e-09 65.9 42 71.4
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 2.5e-09 65.1 45 64.4
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 3.3e-09 64.7 35 85.7
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 5.7e-09 63.9 38 78.9
Actinidia00061 Actinidia chinensis HOM05D006941 ORTHO05D008361 2.8e-08 61.6 30 86.7
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 2.8e-08 61.6 39 69.2
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 1.8e-07 58.9 41 63.4
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 5.3e-07 57.4 35 74.3
HanXRQChr10g0285751 Helianthus annuus HOM05D006941 ORTHO05D008361 6.9e-07 57.0 31 80.6
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 4.5e-06 54.3 45 51.1
Hma1.2p1_0643F.1_g194720 Hydrangea macrophylla HOM05D006941 ORTHO05D008361 5.9e-06 53.9 37 67.6


User provided reference genes

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