Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029110 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 8.2e-120 433.7 217 100.0
CSS0001709 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.3e-32 144.1 80 91.2
Dinv07004 Davidia involucrata HOM05D003515 ORTHO05D004347 6.5e-32 141.7 142 57.0
Hma1.2p1_0088F.1_g045246 Hydrangea macrophylla HOM05D003515 ORTHO05D004347 1.1e-31 141.0 91 79.1
vmacro03558 Vaccinium macrocarpon HOM05D003515 ORTHO05D004347 2.5e-31 139.8 80 88.8
COL.COLO4_16231 Corchorus olitorius HOM05D003515 ORTHO05D004347 3.2e-31 139.4 143 55.2
Lj1C1149T14 Lonicera japonica HOM05D003515 ORTHO05D004347 3.2e-31 139.4 80 87.5
Lj4g0010619 Lotus japonicus HOM05D003515 ORTHO05D004347 3.2e-31 139.4 90 77.8
FAN21G1878 Fragaria x ananassa HOM05D003515 ORTHO05D004347 4.2e-31 139.0 80 86.2
Prupe.4G118000 Prunus persica HOM05D003515 ORTHO05D004347 4.2e-31 139.0 90 77.8
RcHm_v2.0_Chr5g0021171 Rosa chinensis HOM05D003515 ORTHO05D004347 4.2e-31 139.0 80 86.2
RcHm_v2.0_Chr5g0021201 Rosa chinensis HOM05D003515 ORTHO05D004347 4.2e-31 139.0 80 86.2
Medtr4g094755 Medicago truncatula HOM05D003515 ORTHO05D004347 7.1e-31 138.3 80 85.0
Rhsim13G0134000 Rhododendron simsii HOM05D003515 ORTHO05D004347 7.1e-31 138.3 80 87.5
Lalb_Chr13g0293411 Lupinus albus HOM05D003515 ORTHO05D004347 9.3e-31 137.9 79 87.3
Hma1.2p1_0088F.1_g045243 Hydrangea macrophylla HOM05D003515 ORTHO05D004347 1.6e-30 137.1 80 83.8
Thecc.02G003700 Theobroma cacao HOM05D003515 ORTHO05D004347 1.6e-30 137.1 142 54.9
Haze_05267 Corylus avellana HOM05D003515 ORTHO05D004347 2.1e-30 136.7 80 83.8
Gohir.A05G245600 Gossypium hirsutum HOM05D003515 ORTHO05D004347 2.7e-30 136.3 141 55.3
Gohir.D05G247100 Gossypium hirsutum HOM05D003515 ORTHO05D004347 2.7e-30 136.3 141 55.3
Gorai.009G257800 Gossypium raimondii HOM05D003515 ORTHO05D004347 2.7e-30 136.3 141 55.3
Duzib132G1190 Durio zibethinus HOM05D003515 ORTHO05D004347 3.5e-30 136.0 142 54.2
Ca_18232_v3 Cicer arietinum L. HOM05D003515 ORTHO05D004347 4.6e-30 135.6 79 84.8
FvH4_3g13010 Fragaria vesca HOM05D003515 ORTHO05D004347 4.6e-30 135.6 80 83.8
FAN11G3814 Fragaria x ananassa HOM05D003515 ORTHO05D004347 4.6e-30 135.6 80 83.8
HPP92_014201 Vanilla planifolia HOM05D003515 ORTHO05D004347 4.6e-30 135.6 91 76.9
TPR.G22047 Trifolium pratense HOM05D003515 ORTHO05D004347 6.0e-30 135.2 79 83.5
A06p46940 Brassica napus HOM05D003515 ORTHO05D004347 7.9e-30 134.8 157 49.0
FAN16G1075 Fragaria x ananassa HOM05D003515 ORTHO05D004347 1.0e-29 134.4 80 82.5
THA.LOC104812921 Tarenaya hassleriana HOM05D003515 ORTHO05D004347 1.0e-29 134.4 123 59.3
HPP92_026459 Vanilla planifolia HOM05D003515 ORTHO05D004347 1.0e-29 134.4 88 77.3
Cfa001125 Carpinus fangiana HOM05D003515 ORTHO05D004347 1.3e-29 134.0 80 82.5
ECA238G0584 Erigeron canadensis HOM05D003515 ORTHO05D004347 1.3e-29 134.0 80 83.8
MD10G1227200 Malus domestica HOM05D003515 ORTHO05D004347 1.3e-29 134.0 80 82.5
QL11p012061 Quercus lobata HOM05D003515 ORTHO05D004347 1.3e-29 134.0 141 56.0
CiPaw.10G105500 Carya illinoinensis HOM05D003515 ORTHO05D004347 1.8e-29 133.7 80 82.5
Phvul.002G188000 Phaseolus vulgaris HOM05D003515 ORTHO05D004347 2.3e-29 133.3 79 84.8
Aa31LG9G8430 Aethionema arabicum HOM05D003515 ORTHO05D004347 3.0e-29 132.9 91 72.5
TAR624G0550 Trochodendron aralioides HOM05D003515 ORTHO05D004347 3.0e-29 132.9 80 83.8
MSTRG.2876 Avicennia marina HOM05D003515 ORTHO05D004347 3.9e-29 132.5 80 82.5
Glyma.08G088900 Glycine max HOM05D003515 ORTHO05D004347 3.9e-29 132.5 79 83.5
PGR004G1774 Punica granatum HOM05D003515 ORTHO05D004347 3.9e-29 132.5 79 83.5
AT5G44740 Arabidopsis thaliana HOM05D003515 ORTHO05D004347 5.1e-29 132.1 90 73.3
C07p27710 Brassica napus HOM05D003515 ORTHO05D004347 5.1e-29 132.1 157 48.4
Carub.0008s0352 Capsella rubella HOM05D003515 ORTHO05D004347 5.1e-29 132.1 90 72.2
GSVIVG01012151001 Vitis vinifera HOM05D003515 ORTHO05D004347 5.1e-29 132.1 80 85.0
CANSAT35G1862 Cannabis sativa HOM05D003515 ORTHO05D004347 6.7e-29 131.7 90 74.4
Thhalv10000807m.g Eutrema salsugineum HOM05D003515 ORTHO05D004347 6.7e-29 131.7 90 71.1
Psat7g087560 Pisum sativum HOM05D003515 ORTHO05D004347 6.7e-29 131.7 80 81.2
Aqoxy2G04030 Aquilegia oxysepala HOM05D003515 ORTHO05D004347 8.7e-29 131.3 143 53.8
AL8G14790 Arabidopsis lyrata HOM05D003515 ORTHO05D004347 8.7e-29 131.3 90 71.1
TWI63G0015 Tripterygium wilfordii HOM05D003515 ORTHO05D004347 8.7e-29 131.3 80 83.8
BcaNung07103 Brassica carinata HOM05D003515 ORTHO05D004347 1.1e-28 131.0 157 49.0
BraA06t27567Z Brassica rapa HOM05D003515 ORTHO05D004347 1.1e-28 131.0 163 47.9
Phvul.007G100966 Phaseolus vulgaris HOM05D003515 ORTHO05D004347 1.1e-28 131.0 79 83.5
Sp2g09580 Schrenkiella parvula HOM05D003515 ORTHO05D004347 1.1e-28 131.0 157 49.7
Sc05g0004760 Simmondsia chinensis HOM05D003515 ORTHO05D004347 1.1e-28 131.0 79 83.5
CARHR178160 Cardamine hirsuta HOM05D003515 ORTHO05D004347 1.5e-28 130.6 91 70.3
Manes.03G074900 Manihot esculenta HOM05D003515 ORTHO05D004347 1.5e-28 130.6 141 53.2
CSS0002085 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.9e-28 130.2 71 91.5
MELO3C007012.2 Cucumis melo HOM05D003515 ORTHO05D004347 1.9e-28 130.2 90 72.2
HanXRQChr14g0439721 Helianthus annuus HOM05D003515 ORTHO05D004347 1.9e-28 130.2 80 82.5
SGA_v2.0_scaffold298G47708 Striga asiatica HOM05D003515 ORTHO05D004347 1.9e-28 130.2 80 81.2
BolC7t43303H Brassica oleracea HOM05D003515 ORTHO05D004347 2.5e-28 129.8 157 47.8
ClCG01G025730 Citrullus lanatus HOM05D003515 ORTHO05D004347 2.5e-28 129.8 90 71.1
Potri.003G152600 Populus trichocarpa HOM05D003515 ORTHO05D004347 3.3e-28 129.4 80 78.8
Solyc01g034150.4 Solanum lycopersicum HOM05D003515 ORTHO05D004347 3.3e-28 129.4 142 52.8
Sopen01g017810 Solanum pennellii HOM05D003515 ORTHO05D004347 3.3e-28 129.4 142 52.8
arahy.Tifrunner.gnm1.ann1.ZWBN17 Arachis hypogaea HOM05D003515 ORTHO05D004347 5.7e-28 128.6 80 80.0
Peaxi162Scf00151g00110 Petunia axillaris HOM05D003515 ORTHO05D004347 5.7e-28 128.6 142 53.5
Sabra03G0110800 Salix brachista HOM05D003515 ORTHO05D004347 5.7e-28 128.6 80 76.2
SEGI_02016 Sequoiadendron giganteum HOM05D003515 ORTHO05D004347 5.7e-28 128.6 80 81.2
VMungo0251G3194 Vigna mungo HOM05D003515 ORTHO05D004347 5.7e-28 128.6 79 79.7
Cc09_g05170 Coffea canephora HOM05D003515 ORTHO05D004347 7.4e-28 128.3 145 53.8
Nitab4.5_0003190g0020 Nicotiana tabacum HOM05D003515 ORTHO05D004347 7.4e-28 128.3 142 52.8
BcaNung06821 Brassica carinata HOM05D003515 ORTHO05D004347 1.3e-27 127.5 90 67.8
Migut.M02011 Erythranthe guttata HOM05D003515 ORTHO05D004347 1.3e-27 127.5 142 52.8
AUR62040332 Chenopodium quinoa HOM05D003515 ORTHO05D004347 1.6e-27 127.1 79 77.2
CSS0031993 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 2.1e-27 126.7 71 90.1
Eucgr.D00012 Eucalyptus grandis HOM05D003515 ORTHO05D004347 2.1e-27 126.7 79 81.0
EL10Ac7g17242 Beta vulgaris HOM05D003515 ORTHO05D004347 2.8e-27 126.3 79 78.5
CAN.G391.1 Capsicum annuum HOM05D003515 ORTHO05D004347 2.8e-27 126.3 141 53.2
Ciclev10014398m.g Citrus clementina HOM05D003515 ORTHO05D004347 2.8e-27 126.3 90 70.0
Oeu008987.4 Olea europaea HOM05D003515 ORTHO05D004347 2.8e-27 126.3 144 53.5
Atru.chr10.315 Acer truncatum HOM05D003515 ORTHO05D004347 3.7e-27 125.9 89 70.8
CsaV3_6G052970 Cucumis sativus L. HOM05D003515 ORTHO05D004347 3.7e-27 125.9 90 70.0
Nn7g38343 Nelumbo nucifera HOM05D003515 ORTHO05D004347 3.7e-27 125.9 79 78.5
Os01g0757800 Oryza sativa ssp. japonica HOM05D003515 ORTHO05D004347 3.7e-27 125.9 80 81.2
Lsat_1_v5_gn_2_60141 Lactuca sativa HOM05D003515 ORTHO05D004347 1.1e-26 124.4 142 50.7
Sed0024374 Sechium edule HOM05D003515 ORTHO05D004347 1.1e-26 124.4 90 67.8
PSO541G6439 Papaver somniferum HOM05D003515 ORTHO05D004347 1.4e-26 124.0 80 76.2
arahy.Tifrunner.gnm1.ann1.NQ3I2Y Arachis hypogaea HOM05D003515 ORTHO05D004347 2.4e-26 123.2 88 73.9
Zm00001eb152650 Zea mays HOM05D003515 ORTHO05D004347 2.4e-26 123.2 77 80.5
Zm00001eb203100 Zea mays HOM05D003515 ORTHO05D004347 4.1e-26 122.5 79 78.5
DCAR_007777 Daucus carota HOM05D003515 ORTHO05D004347 6.9e-26 121.7 142 50.7
ATR0763G272 Amborella trichopoda HOM05D003515 ORTHO05D004347 4.5e-25 119.0 79 73.4
CSS0046591 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 5.0e-24 115.5 99 66.7
unitig_748.g8071 Utricularia gibba HOM05D003515 ORTHO05D004347 5.0e-24 115.5 91 64.8
CSS0015899 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 4.2e-23 112.5 89 70.8
SHI28055 Sapria himalayana HOM05D003515 ORTHO05D004347 4.2e-23 112.5 77 71.4
RhsimUnG0176900 Rhododendron simsii HOM05D003515 ORTHO05D004347 7.2e-23 111.7 138 50.7
RcHm_v2.0_Chr5g0021111 Rosa chinensis HOM05D003515 ORTHO05D004347 1.2e-22 110.9 80 73.8
Nitab4.5_0000254g0140 Nicotiana tabacum HOM05D003515 ORTHO05D004347 7.9e-22 108.2 142 49.3
Mapoly0100s0031 Marchantia polymorpha HOM05D003515 ORTHO05D004347 1.8e-21 107.1 85 62.4
AagrBONN_evm.TU.Sc2ySwM_228.4437 Anthoceros agrestis HOM05D003515 ORTHO05D004347 6.7e-21 105.1 78 66.7
SMO118G0165 Selaginella moellendorffii HOM05D003515 ORTHO05D004347 8.7e-21 104.8 78 66.7
AUR62037879 Chenopodium quinoa HOM05D003515 ORTHO05D004347 1.1e-20 104.4 79 68.4
SMO222G0016 Selaginella moellendorffii HOM05D010282 ORTHO05D004347 7.4e-20 101.7 78 64.1
Pp3c8_17250 Physcomitrium patens HOM05D003515 ORTHO05D004347 5.5e-15 85.5 74 59.5
CBR_g30567 Chara braunii HOM05D003515 ORTHO05D004347 3.6e-14 82.8 72 56.9
CDE06G0149 Ceratophyllum demersum HOM05D003515 ORTHO05D004347 5.1e-13 79.0 81 51.9
PGSC0003DMG401001013 Solanum tuberosum HOM05D003515 ORTHO05D004347 1.3e-11 74.3 102 47.1
Zm00001eb070690 Zea mays HOM05D003515 ORTHO05D004347 9.1e-10 68.2 40 82.5
Zm00001eb191750 Zea mays HOM05D003515 ORTHO05D004347 9.1e-10 68.2 40 82.5
Zm00001eb225590 Zea mays HOM05D003515 ORTHO05D004347 9.1e-10 68.2 40 82.5
Zm00001eb303570 Zea mays HOM05D003515 ORTHO05D004347 9.1e-10 68.2 40 82.5
Zm00001eb388450 Zea mays HOM05D003515 ORTHO05D004347 9.1e-10 68.2 40 82.5
Zm00001eb440130 Zea mays HOM05D003515 ORTHO05D004347 9.1e-10 68.2 40 82.5
Zm00001eb441390 Zea mays HOM05D003515 ORTHO05D004347 9.1e-10 68.2 40 82.5
Zm00001eb441960 Zea mays HOM05D003515 ORTHO05D004347 9.1e-10 68.2 40 82.5
CSS0035941 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D112705 3.2e-07 59.7 28 96.4
PGSC0003DMG402001013 Solanum tuberosum HOM05D003515 ORTHO05D004347 3.2e-07 59.7 40 70.0
Cre12.g524150 Chlamydomonas reinhardtii HOM05D003515 ORTHO05D004347 1.6e-06 57.4 82 40.2


User provided reference genes

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