Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029082 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 2.1e-178 629.4 450 100.0
Actinidia29020 Actinidia chinensis HOM05D006830 ORTHO05D008119 1.1e-49 201.8 520 38.1
Rhsim05G0232400 Rhododendron simsii HOM05D006830 ORTHO05D008119 9.2e-49 198.7 273 53.1
Hma1.2p1_0537F.1_g174220 Hydrangea macrophylla HOM05D006830 ORTHO05D008119 1.1e-41 175.3 294 42.9
GSVIVG01025871001 Vitis vinifera HOM05D006830 ORTHO05D008119 2.4e-41 174.1 265 44.5
Lj2A57T75 Lonicera japonica HOM05D006830 ORTHO05D008119 1.0e-39 168.7 265 45.7
QL07p031724 Quercus lobata HOM05D006830 ORTHO05D008119 1.1e-38 165.2 270 44.1
Dinv16956 Davidia involucrata HOM05D006830 ORTHO05D008119 2.5e-38 164.1 263 45.2
TAR636G3618 Trochodendron aralioides HOM05D006830 ORTHO05D008119 4.8e-37 159.8 271 43.5
MD12G1191100 Malus domestica HOM05D006830 ORTHO05D008119 1.4e-36 158.3 265 41.1
vmacro20384 Vaccinium macrocarpon HOM05D006830 ORTHO05D008119 2.4e-36 157.5 498 53.4
Prupe.6G296200 Prunus persica HOM05D006830 ORTHO05D008119 2.0e-35 154.5 273 40.3
RcHm_v2.0_Chr3g0460131 Rosa chinensis HOM05D006830 ORTHO05D008119 1.7e-34 151.4 267 42.3
Nn5g26811 Nelumbo nucifera HOM05D006830 ORTHO05D008119 2.2e-34 151.0 259 40.2
TWI77G0580 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 6.4e-34 149.4 265 38.9
Cfa017009 Carpinus fangiana HOM05D006830 ORTHO05D008119 1.9e-33 147.9 283 40.6
CSS0030660 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 9.3e-33 145.6 261 43.3
Manes.08G169600 Manihot esculenta HOM05D006830 ORTHO05D008119 9.3e-33 145.6 269 38.7
Oeu030099.2 Olea europaea HOM05D006830 ORTHO05D008119 9.3e-33 145.6 268 42.2
Haze_21197 Corylus avellana HOM05D006830 ORTHO05D008119 6.0e-32 142.9 286 40.2
TWI74G0093 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 7.8e-32 142.5 263 39.5
Potri.016G139000 Populus trichocarpa HOM05D006830 ORTHO05D008119 8.7e-31 139.0 270 38.5
Thecc.04G149300 Theobroma cacao HOM05D006830 ORTHO05D008119 1.9e-30 137.9 267 39.7
MBI15_g32284_MAGBIO Magnolia biondii HOM05D006830 ORTHO05D008119 4.3e-30 136.7 268 41.8
PGR031G0539 Punica granatum HOM05D006830 ORTHO05D008119 4.3e-30 136.7 267 38.2
Oeu026939.4 Olea europaea HOM05D006830 ORTHO05D008119 1.6e-29 134.8 271 41.0
Ciclev10011645m.g Citrus clementina HOM05D006830 ORTHO05D008119 2.8e-29 134.0 256 37.5
FAN09G0658 Fragaria x ananassa HOM05D006830 ORTHO05D008119 2.8e-29 134.0 283 36.7
Sc20g0007150 Simmondsia chinensis HOM05D006830 ORTHO05D008119 2.8e-29 134.0 271 39.5
FvH4_6g09531 Fragaria vesca HOM05D006830 ORTHO05D008119 3.6e-29 133.7 264 38.6
FAN05G1111 Fragaria x ananassa HOM05D006830 ORTHO05D008119 3.6e-29 133.7 264 39.4
FAN14G4211 Fragaria x ananassa HOM05D006830 ORTHO05D008119 3.6e-29 133.7 264 38.6
Solyc09g016940.4 Solanum lycopersicum HOM05D006830 ORTHO05D008119 8.1e-29 132.5 270 38.5
Potri.006G110400 Populus trichocarpa HOM05D006830 ORTHO05D008119 1.1e-28 132.1 265 38.5
Sopen09g010200 Solanum pennellii HOM05D006830 ORTHO05D008119 1.1e-28 132.1 270 38.5
Sabra04G0154900 Salix brachista HOM05D006830 ORTHO05D008119 3.1e-28 130.6 252 38.1
Eucgr.A00784 Eucalyptus grandis HOM05D006830 ORTHO05D008119 9.0e-28 129.0 260 36.9
Lj1g0026994 Lotus japonicus HOM05D006830 ORTHO05D008119 7.6e-27 125.9 267 38.6
Nitab4.5_0000048g0180 Nicotiana tabacum HOM05D006830 ORTHO05D008119 9.9e-27 125.6 261 38.3
arahy.Tifrunner.gnm1.ann1.E2XN58 Arachis hypogaea HOM05D006830 ORTHO05D008119 1.3e-26 125.2 275 37.8
MSTRG.18932 Avicennia marina HOM05D006830 ORTHO05D008119 1.3e-26 125.2 315 32.7
arahy.Tifrunner.gnm1.ann1.QV5EPW Arachis hypogaea HOM05D006830 ORTHO05D008119 2.9e-26 124.0 274 38.0
Nitab4.5_0001876g0080 Nicotiana tabacum HOM05D006830 ORTHO05D008119 1.4e-25 121.7 260 37.7
Cpa.g.sc72.63 Carica papaya HOM05D006830 ORTHO05D008119 2.4e-25 120.9 258 35.3
ECA248G1589 Erigeron canadensis HOM05D006830 ORTHO05D008119 5.4e-25 119.8 264 36.7
Atru.chr8.80 Acer truncatum HOM05D006830 ORTHO05D008119 7.1e-25 119.4 248 37.1
AUR62006437 Chenopodium quinoa HOM05D006830 ORTHO05D008119 7.1e-25 119.4 269 32.7
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 7.1e-25 119.4 271 36.9
FAN02G1118 Fragaria x ananassa HOM05D006830 ORTHO05D008119 2.1e-24 117.9 255 38.0
Gorai.006G236000 Gossypium raimondii HOM05D006830 ORTHO05D008119 2.1e-24 117.9 251 37.8
Medtr7g073700 Medicago truncatula HOM05D006830 ORTHO05D008119 2.1e-24 117.9 264 36.4
Migut.J00020 Erythranthe guttata HOM05D006830 ORTHO05D008119 7.9e-24 115.9 267 36.7
SGA_v2.0_scaffold85G26596 Striga asiatica HOM05D006830 ORTHO05D008119 3.9e-23 113.6 260 35.8
AUR62029792 Chenopodium quinoa HOM05D006830 ORTHO05D008119 6.7e-23 112.8 269 33.1
CSS0037917 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 8.7e-23 112.5 261 38.3
Carub.0004s2057 Capsella rubella HOM05D006830 ORTHO05D008119 4.3e-22 110.2 260 34.6
COL.COLO4_21252 Corchorus olitorius HOM05D006830 ORTHO05D008119 5.6e-22 109.8 241 37.8
Gohir.D09G215500 Gossypium hirsutum HOM05D006830 ORTHO05D008119 9.6e-22 109.0 250 36.4
EL10Ac7g17129 Beta vulgaris HOM05D006830 ORTHO05D008119 3.7e-21 107.1 269 32.3
Peaxi162Scf00732g00253 Petunia axillaris HOM05D006830 ORTHO05D008119 4.8e-21 106.7 240 36.7
Sp4g20920 Schrenkiella parvula HOM05D006830 ORTHO05D008119 4.0e-20 103.6 261 32.2
DCAR_023967 Daucus carota HOM05D006830 ORTHO05D008119 5.3e-20 103.2 276 34.8
Glyma.18G216100 Glycine max HOM05D006830 ORTHO05D008119 5.3e-20 103.2 234 36.8
Thhalv10016585m.g Eutrema salsugineum HOM05D006830 ORTHO05D008119 6.9e-20 102.8 260 33.5
CsaV3_3G032990 Cucumis sativus L. HOM05D006830 ORTHO05D008119 9.0e-20 102.4 268 33.2
Duzib268G1795 Durio zibethinus HOM05D006830 ORTHO05D008119 9.0e-20 102.4 216 36.1
PSO384G2539 Papaver somniferum HOM05D006830 ORTHO05D008119 3.4e-19 100.5 268 32.8
TPR.G24307 Trifolium pratense HOM05D006830 ORTHO05D008119 7.6e-19 99.4 216 36.1
MELO3C009096.2 Cucumis melo HOM05D006830 ORTHO05D008119 2.2e-18 97.8 267 34.5
Ah.08g209170 Amaranthus hybridus HOM05D006830 ORTHO05D008119 3.8e-18 97.1 266 31.6
Gohir.A09G213672 Gossypium hirsutum HOM05D006830 ORTHO05D008119 4.9e-18 96.7 233 36.1
C03p25270 Brassica napus HOM05D006830 ORTHO05D008119 6.5e-18 96.3 260 31.5
BolC3t14921H Brassica oleracea HOM05D006830 ORTHO05D008119 6.5e-18 96.3 260 31.5
VMungo1383G1745 Vigna mungo HOM05D006830 ORTHO05D008119 8.4e-18 95.9 268 35.1
A03p21400 Brassica napus HOM05D006830 ORTHO05D008119 1.1e-17 95.5 260 31.5
Ca_07782_v3 Cicer arietinum L. HOM05D006830 ORTHO05D008119 1.4e-17 95.1 220 35.0
Hund19745 Selenicereus undatus HOM05D006830 ORTHO05D008119 1.4e-17 95.1 265 37.0
Glyma.09G273000 Glycine max HOM05D006830 ORTHO05D008119 1.9e-17 94.7 217 36.4
HanXRQChr01g0000521 Helianthus annuus HOM05D006830 ORTHO05D008119 1.9e-17 94.7 228 37.3
BraA03t11375Z Brassica rapa HOM05D006830 ORTHO05D008119 2.5e-17 94.4 260 31.2
Lalb_Chr01g0023901 Lupinus albus HOM05D006830 ORTHO05D008119 9.3e-17 92.4 234 33.3
PSO339G2021 Papaver somniferum HOM05D006830 ORTHO05D008119 1.6e-16 91.7 189 36.5
CDE04G1359 Ceratophyllum demersum HOM05D006830 ORTHO05D008119 6.0e-16 89.7 272 31.6
ClCG10G022820 Citrullus lanatus HOM05D006830 ORTHO05D008119 7.9e-16 89.4 285 31.6
Phvul.008G080600 Phaseolus vulgaris HOM05D006830 ORTHO05D008119 5.1e-15 86.7 190 37.4
Hund03691 Selenicereus undatus HOM05D006830 ORTHO05D008119 1.5e-14 85.1 273 31.5
Duzib151G0823 Durio zibethinus HOM05D006830 ORTHO05D008119 1.9e-14 84.7 217 34.1
unitig_22.g6617 Utricularia gibba HOM05D006830 ORTHO05D008119 7.4e-14 82.8 268 29.5
Sed0004389 Sechium edule HOM05D006830 ORTHO05D008119 6.2e-13 79.7 227 33.5
AL4G35860 Arabidopsis lyrata HOM05D006830 ORTHO05D008119 8.2e-13 79.3 209 30.6
Actinidia11494 Actinidia chinensis HOM05D040087 ORTHO05D008119 1.1e-12 79.0 99 55.6
BcaC01g05528 Brassica carinata HOM05D006830 ORTHO05D008119 2.4e-12 77.8 257 27.6
AT2G38580 Arabidopsis thaliana HOM05D006830 ORTHO05D008119 3.1e-12 77.4 209 30.1
THA.LOC104806205 Tarenaya hassleriana HOM05D006830 ORTHO05D008119 3.1e-12 77.4 265 31.3
CARHR133260 Cardamine hirsuta HOM05D006830 ORTHO05D008119 2.6e-11 74.3 236 28.8
BcaB01g03674 Brassica carinata HOM05D006830 ORTHO05D008119 2.2e-10 71.2 259 29.3
CANSAT60G0001 Cannabis sativa HOM05D006830 ORTHO05D008119 6.5e-10 69.7 95 46.3
CANSAT21G1452 Cannabis sativa HOM05D006830 ORTHO05D008119 8.4e-10 69.3 95 46.3
Os03g0333000 Oryza sativa ssp. japonica HOM05D006830 ORTHO05D008119 9.3e-09 65.9 62 54.8
C03p25310 Brassica napus HOM05D006830 ORTHO05D008119 7.9e-08 62.8 259 26.6
HPP92_012572 Vanilla planifolia HOM05D006830 ORTHO05D008119 2.3e-07 61.2 255 30.2
Zm00001eb015900 Zea mays HOM05D006830 ORTHO05D008119 6.7e-07 59.7 196 29.6
ATR1127G221 Amborella trichopoda HOM05D006830 ORTHO05D008119 1.1e-06 58.9 333 25.8
Lsat_1_v5_gn_5_151701 Lactuca sativa HOM05D006830 ORTHO05D008119 1.5e-06 58.5 61 59.0
HPP92_012541 Vanilla planifolia HOM05D006830 ORTHO05D008119 7.4e-06 56.2 59 50.8


User provided reference genes

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