Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029044 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 9.6e-200 699.9 339 100.0
vmacro19146 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 4.7e-170 601.3 333 84.1
Lj5A92G44 Lonicera japonica HOM05D005105 ORTHO05D006244 2.7e-154 548.9 334 75.4
TAR629G0447 Trochodendron aralioides HOM05D005105 ORTHO05D006244 2.9e-148 528.9 335 74.0
Hma1.2p1_0093F.1_g046930 Hydrangea macrophylla HOM05D005105 ORTHO05D006244 2.5e-147 525.8 324 77.2
DCAR_007509 Daucus carota HOM05D005105 ORTHO05D006244 7.7e-141 504.2 333 71.5
GSVIVG01008594001 Vitis vinifera HOM05D005105 ORTHO05D006244 2.8e-138 495.7 327 72.5
Nn3g16360 Nelumbo nucifera HOM05D005105 ORTHO05D006244 5.2e-137 491.5 330 69.7
PSO017G6125 Papaver somniferum HOM05D005105 ORTHO05D006244 1.2e-133 480.3 333 68.2
PSO478G4366 Papaver somniferum HOM05D005105 ORTHO05D006244 2.0e-133 479.6 333 67.9
GSVIVG01033038001 Vitis vinifera HOM05D005105 ORTHO05D006244 9.5e-131 470.7 331 67.4
RcHm_v2.0_Chr2g0176111 Rosa chinensis HOM05D005105 ORTHO05D006244 2.8e-130 469.2 322 69.6
Actinidia18328 Actinidia chinensis HOM05D005105 ORTHO05D006244 4.7e-130 468.4 267 82.0
Potri.001G325500 Populus trichocarpa HOM05D005105 ORTHO05D006244 1.4e-129 466.8 321 69.8
FAN05G2765 Fragaria x ananassa HOM05D005105 ORTHO05D006244 5.2e-129 464.9 322 69.6
CANSAT21G1015 Cannabis sativa HOM05D005105 ORTHO05D006244 6.8e-129 464.5 323 67.8
FAN02G1943 Fragaria x ananassa HOM05D005105 ORTHO05D006244 2.6e-128 462.6 322 68.9
Thecc.04G041900 Theobroma cacao HOM05D005105 ORTHO05D006244 2.6e-128 462.6 321 69.8
FAN09G0463 Fragaria x ananassa HOM05D005105 ORTHO05D006244 3.4e-128 462.2 322 69.3
FvH4_6g53950 Fragaria vesca HOM05D005105 ORTHO05D006244 4.4e-128 461.8 322 68.9
FAN14G3030 Fragaria x ananassa HOM05D005105 ORTHO05D006244 5.8e-128 461.5 322 68.9
QL02p070577 Quercus lobata HOM05D005105 ORTHO05D006244 5.8e-128 461.5 322 68.0
Aqoxy5G03244_Aqoxy5G03245 Aquilegia oxysepala HOM05D005105 ORTHO05D006244 4.9e-127 458.4 326 66.3
Lj7A613T64 Lonicera japonica HOM05D005105 ORTHO05D006244 4.9e-127 458.4 326 67.2
Lsat_1_v5_gn_5_10960 Lactuca sativa HOM05D005105 ORTHO05D006244 8.3e-127 457.6 327 64.8
MD09G1007000 Malus domestica HOM05D005105 ORTHO05D006244 8.3e-127 457.6 328 66.8
MELO3C025087.2 Cucumis melo HOM05D005105 ORTHO05D006244 4.1e-126 455.3 330 67.0
Dinv33309 Davidia involucrata HOM05D005105 ORTHO05D006244 1.2e-125 453.8 320 67.2
Migut.F00035 Erythranthe guttata HOM05D005105 ORTHO05D006244 1.6e-125 453.4 322 66.8
CsaV3_5G024330 Cucumis sativus L. HOM05D005105 ORTHO05D006244 2.0e-125 453.0 330 66.1
Cc07_g01060 Coffea canephora HOM05D005105 ORTHO05D006244 2.7e-125 452.6 325 67.4
Duzib147G0369 Durio zibethinus HOM05D005105 ORTHO05D006244 2.7e-125 452.6 323 68.1
SalBow4G0131 Salvia bowleyana HOM05D005105 ORTHO05D006244 4.6e-125 451.8 319 66.8
Prupe.3G310100 Prunus persica HOM05D005105 ORTHO05D006244 6.0e-125 451.4 322 66.5
Sed0022814 Sechium edule HOM05D005105 ORTHO05D006244 1.0e-124 450.7 330 65.5
Nitab4.5_0011381g0040 Nicotiana tabacum HOM05D005105 ORTHO05D006244 1.3e-124 450.3 324 65.1
HanXRQChr05g0155591 Helianthus annuus HOM05D005105 ORTHO05D006244 1.7e-124 449.9 327 64.5
Eucgr.I01623 Eucalyptus grandis HOM05D005105 ORTHO05D006244 3.9e-124 448.7 325 65.8
Oeu020395.1 Olea europaea HOM05D005105 ORTHO05D006244 5.0e-124 448.4 324 66.0
Gorai.006G044700 Gossypium raimondii HOM05D005105 ORTHO05D006244 6.6e-124 448.0 346 64.2
TWI60G0613 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 6.6e-124 448.0 321 67.0
Atru.chr6.2613 Acer truncatum HOM05D005105 ORTHO05D006244 1.9e-123 446.4 321 65.4
ClCG01G008700 Citrullus lanatus HOM05D005105 ORTHO05D006244 3.3e-123 445.7 330 65.2
Manes.04G087600 Manihot esculenta HOM05D005105 ORTHO05D006244 4.3e-123 445.3 321 66.0
Haze_14911 Corylus avellana HOM05D005105 ORTHO05D006244 5.6e-123 444.9 307 69.4
Nitab4.5_0011717g0030 Nicotiana tabacum HOM05D005105 ORTHO05D006244 5.6e-123 444.9 321 65.4
vmacro18364 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 7.3e-123 444.5 327 63.9
Rhsim08G0041000 Rhododendron simsii HOM05D005105 ORTHO05D006244 2.1e-122 443.0 322 65.8
Sc09g0007730 Simmondsia chinensis HOM05D005105 ORTHO05D006244 6.2e-122 441.4 325 65.8
Ciclev10014761m.g Citrus clementina HOM05D005105 ORTHO05D006244 1.1e-121 440.7 320 65.9
PGR142G1816 Punica granatum HOM05D005105 ORTHO05D006244 1.4e-121 440.3 323 64.1
Cfa007197 Carpinus fangiana HOM05D005105 ORTHO05D006244 1.8e-121 439.9 321 65.7
TWI34G1796 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 1.8e-121 439.9 321 64.8
Gohir.A07G231500 Gossypium hirsutum HOM05D005105 ORTHO05D006244 3.1e-121 439.1 321 66.0
Solyc02g082210.4 Solanum lycopersicum HOM05D005105 ORTHO05D006244 3.1e-121 439.1 325 63.1
Gohir.D07G238700 Gossypium hirsutum HOM05D005105 ORTHO05D006244 5.2e-121 438.3 321 65.7
ATR0582G106 Amborella trichopoda HOM05D005105 ORTHO05D006244 8.9e-121 437.6 327 62.4
Gorai.001G274700 Gossypium raimondii HOM05D005105 ORTHO05D006244 1.5e-120 436.8 321 65.7
Dinv23187 Davidia involucrata HOM05D005105 ORTHO05D006244 4.4e-120 435.3 257 80.5
CiPaw.03G004800 Carya illinoinensis HOM05D005105 ORTHO05D006244 1.7e-119 433.3 311 66.9
arahy.Tifrunner.gnm1.ann1.B1CDD0 Arachis hypogaea HOM05D005105 ORTHO05D006244 1.4e-118 430.3 321 63.9
Ca_07318_v3 Cicer arietinum L. HOM05D005105 ORTHO05D006244 1.9e-118 429.9 321 62.9
Lj1g0026609 Lotus japonicus HOM05D005105 ORTHO05D006244 1.9e-118 429.9 322 63.7
arahy.Tifrunner.gnm1.ann1.JMV5LB Arachis hypogaea HOM05D005105 ORTHO05D006244 2.4e-118 429.5 321 63.6
EL10Ac6g15451 Beta vulgaris HOM05D005105 ORTHO05D006244 2.4e-118 429.5 325 64.9
HPP92_009891 Vanilla planifolia HOM05D005105 ORTHO05D006244 7.0e-118 427.9 327 63.0
Sabra16G0208000 Salix brachista HOM05D005105 ORTHO05D006244 1.6e-117 426.8 312 66.7
Glyma.16G052500 Glycine max HOM05D005105 ORTHO05D006244 6.0e-117 424.9 321 62.6
Medtr7g026520 Medicago truncatula HOM05D005105 ORTHO05D006244 6.0e-117 424.9 324 62.7
AUR62029433 Chenopodium quinoa HOM05D005105 ORTHO05D006244 2.3e-116 422.9 325 64.3
AUR62003394 Chenopodium quinoa HOM05D005105 ORTHO05D006244 6.6e-116 421.4 325 64.0
VMungo1383G1917 Vigna mungo HOM05D005105 ORTHO05D006244 5.6e-115 418.3 321 61.7
HanXRQChr17g0551611 Helianthus annuus HOM05D005105 ORTHO05D006244 7.3e-115 417.9 326 62.3
Lj2g0026571 Lotus japonicus HOM05D005105 ORTHO05D006244 1.2e-114 417.2 321 62.6
MD17G1010700 Malus domestica HOM05D005105 ORTHO05D006244 1.6e-114 416.8 328 62.8
DCAR_015209 Daucus carota HOM05D005105 ORTHO05D006244 2.8e-114 416.0 329 63.2
Lsat_1_v5_gn_0_23961 Lactuca sativa HOM05D005105 ORTHO05D006244 2.8e-114 416.0 321 62.0
unitig_0.g1913 Utricularia gibba HOM05D005105 ORTHO05D006244 6.2e-114 414.8 312 63.8
CDE06G1277 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 2.3e-113 412.9 337 59.6
Lalb_Chr00c40g0412501 Lupinus albus HOM05D005105 ORTHO05D006244 5.2e-113 411.8 321 62.3
Phvul.004G070700 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 5.2e-113 411.8 322 62.1
BcaC06g33873 Brassica carinata HOM05D005105 ORTHO05D006244 1.5e-112 410.2 323 59.4
Psat3g181600 Pisum sativum HOM05D005105 ORTHO05D006244 1.5e-112 410.2 328 60.4
THA.LOC104825638 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 1.5e-112 410.2 329 60.2
C07p36060 Brassica napus HOM05D005105 ORTHO05D006244 2.6e-112 409.5 323 59.8
PGSC0003DMG400013660 Solanum tuberosum HOM05D005105 ORTHO05D006244 2.6e-112 409.5 302 63.6
Thhalv10003939m.g Eutrema salsugineum HOM05D005105 ORTHO05D006244 4.4e-112 408.7 323 59.4
BolC7t44120H Brassica oleracea HOM05D005105 ORTHO05D006244 5.8e-112 408.3 323 59.1
CARHR148130 Cardamine hirsuta HOM05D005105 ORTHO05D006244 5.8e-112 408.3 323 59.4
Sp2g16080 Schrenkiella parvula HOM05D005105 ORTHO05D006244 5.8e-112 408.3 323 59.8
BcaC06g31032 Brassica carinata HOM05D005105 ORTHO05D006244 7.5e-112 407.9 323 59.8
Sopen02g026870 Solanum pennellii HOM05D005105 ORTHO05D006244 7.5e-112 407.9 302 63.2
BraA06t27085Z Brassica rapa HOM05D005105 ORTHO05D006244 1.3e-111 407.1 324 59.6
AT3G26950 Arabidopsis thaliana HOM05D005105 ORTHO05D006244 1.7e-111 406.8 323 59.4
A06p41600 Brassica napus HOM05D005105 ORTHO05D006244 2.9e-111 406.0 323 59.1
Phvul.001G090000 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 4.9e-111 405.2 321 60.7
VMungo0464G0185 Vigna mungo HOM05D005105 ORTHO05D006244 4.9e-111 405.2 310 63.2
CSS0048130 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 1.6e-109 400.2 322 60.2
Carub.0005s0514 Capsella rubella HOM05D005105 ORTHO05D006244 1.6e-109 400.2 323 57.9
THA.LOC104805319 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 1.6e-109 400.2 341 56.0
Aa31LG2G5630 Aethionema arabicum HOM05D005105 ORTHO05D006244 4.6e-109 398.7 357 54.3
AL5G15980 Arabidopsis lyrata HOM05D005105 ORTHO05D006244 7.8e-109 397.9 323 57.9
ECA246G4542 Erigeron canadensis HOM05D005105 ORTHO05D006244 1.0e-108 397.5 326 59.5
Glyma.16G146100 Glycine max HOM05D005105 ORTHO05D006244 2.3e-108 396.4 322 59.0
Os11g0507400 Oryza sativa ssp. japonica HOM05D005105 ORTHO05D006244 5.1e-108 395.2 319 59.2
Atru.chr6.2614 Acer truncatum HOM05D005105 ORTHO05D006244 1.4e-105 387.1 302 60.9
SHI04027 Sapria himalayana HOM05D005105 ORTHO05D006244 6.4e-103 378.3 335 55.5
COL.COLO4_13307 Corchorus olitorius HOM05D005105 ORTHO05D006244 6.0e-101 371.7 323 60.1
Actinidia36228 Actinidia chinensis HOM05D005105 ORTHO05D006244 8.7e-100 367.9 271 67.2
Prupe.3G297400 Prunus persica HOM05D005105 ORTHO05D006244 1.6e-98 363.6 327 56.0
Duzib264G1310 Durio zibethinus HOM05D005105 ORTHO05D006244 1.3e-92 344.0 237 70.5
Peaxi162Scf00331g00014 Petunia axillaris HOM05D005105 ORTHO05D006244 2.2e-87 326.6 239 64.0
ECA246G1012 Erigeron canadensis HOM05D005105 ORTHO05D006244 5.6e-83 312.0 245 62.9
SMO180G0002 Selaginella moellendorffii HOM05D005105 ORTHO05D006244 2.8e-82 309.7 323 47.4
TWI34G0688 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 6.2e-82 308.5 213 66.7
Gohir.A09G038300 Gossypium hirsutum HOM05D005105 ORTHO05D006244 7.9e-77 291.6 214 68.2
Pp3c1_35010 Physcomitrium patens HOM05D005105 ORTHO05D006244 1.5e-72 277.3 321 44.5
Cpa.g.sc70.110 Carica papaya HOM05D005105 ORTHO05D006244 4.5e-72 275.8 221 62.9
Pp3c21_14570 Physcomitrium patens HOM05D005105 ORTHO05D006244 5.8e-72 275.4 322 44.4
Actinidia25549 Actinidia chinensis HOM05D005105 ORTHO05D006244 9.4e-62 241.5 136 78.7
CDE05G2066 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 1.8e-60 237.3 146 74.0
Gohir.D09G039750 Gossypium hirsutum HOM05D005105 ORTHO05D006244 5.2e-44 182.6 146 63.7
Actinidia05877 Actinidia chinensis HOM05D000139 ORTHO05D000103 2.6e-35 153.7 209 44.5
AagrBONN_evm.TU.Sc2ySwM_340.35 Anthoceros agrestis HOM05D005105 ORTHO05D006244 9.7e-35 151.8 314 29.9
THA.LOC104813335 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 3.1e-33 146.7 139 54.0
Glyma.02G065000 Glycine max HOM05D005105 ORTHO05D006244 9.1e-33 145.2 140 54.3
PSO063G6475 Papaver somniferum HOM05D005105 ORTHO05D006244 3.4e-27 126.7 84 70.2
Glyma.19G097101 Glycine max HOM05D005105 ORTHO05D006244 1.1e-22 111.7 86 62.8
CBR_g57654 Chara braunii HOM05D000004 ORTHO05D000002 7.8e-16 89.0 101 44.6
HPP92_009881 Vanilla planifolia HOM05D005105 ORTHO05D006244 6.1e-13 79.3 54 64.8
HPP92_009880 Vanilla planifolia HOM05D005105 ORTHO05D006244 4.0e-12 76.6 71 50.7
SEGI_15377 Sequoiadendron giganteum HOM05D005105 ORTHO05D006244 4.4e-11 73.2 76 46.1
Actinidia25550 Actinidia chinensis HOM05D005105 ORTHO05D006244 9.5e-06 55.5 39 64.1


User provided reference genes

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