Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 6.5e-199 697.2 353 100.0
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 3.8e-175 618.2 349 88.5
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 2.7e-165 585.5 356 83.4
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 4.4e-163 578.2 348 81.6
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 3.1e-161 572.0 353 78.2
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 4.1e-161 571.6 353 79.3
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 1.6e-160 569.7 353 77.6
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 5.0e-159 564.7 342 80.1
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 1.1e-158 563.5 344 79.1
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 1.9e-158 562.8 344 78.8
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 4.3e-158 561.6 349 77.7
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 4.3e-158 561.6 347 78.4
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 5.6e-158 561.2 346 78.0
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 7.3e-158 560.8 345 78.3
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 7.3e-158 560.8 349 78.8
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 2.1e-157 559.3 349 77.9
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 3.6e-157 558.5 347 80.1
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 4.7e-157 558.1 347 77.5
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 6.1e-157 557.8 354 75.7
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 8.0e-157 557.4 349 77.9
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 1.4e-156 556.6 351 75.2
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 1.4e-156 556.6 349 77.7
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 5.2e-156 554.7 347 77.8
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 6.8e-156 554.3 318 83.0
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 6.8e-156 554.3 336 78.9
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 8.9e-156 553.9 346 78.0
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 1.5e-155 553.1 343 77.0
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 3.4e-155 552.0 348 74.7
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 7.5e-155 550.8 348 77.3
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.3e-154 550.1 344 76.2
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.7e-154 549.7 346 76.3
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 2.2e-154 549.3 348 75.0
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 2.9e-154 548.9 360 75.6
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 3.7e-154 548.5 349 75.6
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 8.3e-154 547.4 332 81.3
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 5.4e-153 544.7 348 76.7
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 5.4e-153 544.7 350 77.4
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 5.4e-153 544.7 321 78.8
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 7.0e-153 544.3 345 73.9
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 9.2e-153 543.9 338 76.3
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 9.2e-153 543.9 342 76.6
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 2.0e-152 542.7 337 77.7
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 2.0e-152 542.7 307 86.6
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 2.7e-152 542.3 359 75.2
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 3.5e-152 542.0 347 76.9
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 1.7e-151 539.7 347 75.5
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 2.3e-151 539.3 344 77.3
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 2.3e-151 539.3 352 75.3
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 3.0e-151 538.9 349 73.9
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 3.9e-151 538.5 319 77.1
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 6.6e-151 537.7 336 77.4
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 8.6e-151 537.3 343 74.6
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 1.1e-150 537.0 339 74.3
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 2.5e-150 535.8 340 75.6
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 2.3e-148 529.3 339 75.2
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 2.3e-148 529.3 345 72.2
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 5.2e-148 528.1 343 72.6
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 1.2e-147 526.9 348 71.6
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 2.0e-147 526.2 343 71.7
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.0e-147 526.2 348 73.9
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 2.9e-146 522.3 351 72.9
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 3.7e-146 521.9 349 72.2
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 5.4e-145 518.1 322 78.9
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 9.2e-145 517.3 350 71.7
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 1.2e-144 516.9 353 71.7
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 2.0e-144 516.2 349 71.1
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 2.0e-144 516.2 350 71.4
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 7.8e-144 514.2 349 71.1
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 7.8e-144 514.2 349 71.1
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 7.8e-144 514.2 379 70.2
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 1.0e-143 513.8 349 71.1
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 1.0e-143 513.8 349 71.1
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 2.3e-143 512.7 353 71.4
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 1.5e-142 510.0 349 71.6
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 1.9e-142 509.6 344 72.4
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 4.3e-142 508.4 349 70.2
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 4.3e-142 508.4 306 75.8
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 7.3e-142 507.7 344 72.1
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 2.0e-139 499.6 348 73.0
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 4.9e-138 495.0 315 74.3
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 2.7e-136 489.2 318 73.6
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 2.3e-135 486.1 323 72.4
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 4.4e-131 471.9 326 67.2
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 2.7e-128 462.6 321 67.0
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 5.1e-127 458.4 323 65.9
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 6.6e-127 458.0 262 82.4
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 5.6e-126 454.9 342 67.5
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 4.9e-122 441.8 255 82.7
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 5.4e-121 438.3 534 50.4
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.5e-118 430.3 344 64.0
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 1.6e-117 426.8 336 68.5
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.1e-116 424.1 308 65.3
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 5.3e-116 421.8 396 57.8
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 4.9e-114 415.2 350 62.0
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 5.4e-113 411.8 229 87.3
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 1.8e-108 396.7 366 60.4
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 5.8e-107 391.7 222 84.2
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 4.2e-105 385.6 248 77.0
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 2.8e-93 346.3 192 84.4
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 9.1e-84 314.7 338 52.7
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.4e-81 307.4 165 84.8
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.1e-76 291.2 177 81.4
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 5.7e-70 268.9 220 56.8
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 6.3e-69 265.4 413 38.0
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 8.8e-63 245.0 326 42.6
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.8e-60 237.3 133 83.5
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 4.4e-54 216.1 127 78.7
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 5.0e-50 202.6 323 40.2
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 3.4e-46 189.9 345 34.5
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 9.8e-46 188.3 126 69.8
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 4.3e-41 172.9 97 82.5
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 2.2e-37 160.6 100 71.0
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 4.6e-35 152.9 84 84.5
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 3.0e-26 123.6 83 69.9
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 7.3e-25 119.0 61 86.9
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 7.8e-19 99.0 76 63.2
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 1.6e-16 91.3 56 82.1
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 5.1e-10 69.7 44 63.6
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 1.6e-08 64.7 165 29.7
SEGI_14439 Sequoiadendron giganteum HOM05D006459 ORTHO05D385787 4.7e-08 63.2 51 58.8
Lsat_1_v5_gn_2_49420 Lactuca sativa HOM05D006459 ORTHO05D008414 9.9e-06 55.5 30 83.3


User provided reference genes

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