Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028970 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 1.8e-30 135.2 63 100.0
CSS0026237 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 8.7e-30 132.9 63 98.4
CSS0032252 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 5.3e-19 97.1 84 61.9
Actinidia16647 Actinidia chinensis HOM05D008456 ORTHO05D010229 1.2e-18 95.9 84 63.1
Lj3C1016G2 Lonicera japonica HOM05D008456 ORTHO05D010229 1.5e-18 95.5 84 64.3
Manes.14G101800 Manihot esculenta HOM05D008456 ORTHO05D010229 2.7e-15 84.7 89 56.2
EL10Ac6g14422 Beta vulgaris HOM05D008456 ORTHO05D010229 4.6e-15 84.0 84 59.5
ECA233G2223 Erigeron canadensis HOM05D008456 ORTHO05D010229 3.0e-14 81.3 87 58.6
GSVIVG01011903001 Vitis vinifera HOM05D008456 ORTHO05D010229 5.1e-14 80.5 82 56.1
Haze_17475 Corylus avellana HOM05D008456 ORTHO05D010229 8.7e-14 79.7 89 53.9
Hund25068 Selenicereus undatus HOM05D008456 ORTHO05D010229 8.7e-14 79.7 85 57.6
SalBow8G1526 Salvia bowleyana HOM05D008456 ORTHO05D010229 4.3e-13 77.4 87 59.8
CiPaw.16G064600 Carya illinoinensis HOM05D008456 ORTHO05D010229 9.7e-13 76.3 88 53.4
vmacro10553 Vaccinium macrocarpon HOM05D008456 ORTHO05D010229 9.7e-13 76.3 76 56.6
Cc11_g10220 Coffea canephora HOM05D008456 ORTHO05D010229 1.3e-12 75.9 41 82.9
Gohir.A12G167400 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.3e-12 75.9 94 48.9
Gorai.013G076200 Gossypium raimondii HOM05D008456 ORTHO05D010229 2.2e-12 75.1 87 51.7
Phvul.007G026950 Phaseolus vulgaris HOM05D008456 ORTHO05D010229 2.2e-12 75.1 93 48.4
Glyma.10G274651 Glycine max HOM05D008456 ORTHO05D010229 3.7e-12 74.3 88 51.1
Gohir.D12G170800 Gossypium hirsutum HOM05D008456 ORTHO05D010229 6.3e-12 73.6 94 48.9
Gorai.008G183400 Gossypium raimondii HOM05D008456 ORTHO05D010229 6.3e-12 73.6 94 48.9
Lj5g0022784 Lotus japonicus HOM05D008456 ORTHO05D010229 8.2e-12 73.2 40 82.5
CsaV3_6G003500 Cucumis sativus L. HOM05D008456 ORTHO05D010229 1.1e-11 72.8 77 55.8
Gohir.D13G066900 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.1e-11 72.8 87 50.6
Solyc05g009460.3 Solanum lycopersicum HOM05D008456 ORTHO05D010229 1.1e-11 72.8 86 52.3
Gohir.A13G055200 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.8e-11 72.0 87 50.6
Manes.06G069000 Manihot esculenta HOM05D008456 ORTHO05D010229 3.1e-11 71.2 37 89.2
Prupe.1G310000 Prunus persica HOM05D008456 ORTHO05D010229 4.1e-11 70.9 86 51.2
Thecc.02G355800 Theobroma cacao HOM05D008456 ORTHO05D010229 4.1e-11 70.9 93 52.7
arahy.Tifrunner.gnm1.ann1.J0DG7J Arachis hypogaea HOM05D008456 ORTHO05D010229 1.2e-10 69.3 40 80.0
Oeu014305.1 Olea europaea HOM05D000497 ORTHO05D002300 1.2e-10 69.3 78 57.7
MD16G1043600 Malus domestica HOM05D008456 ORTHO05D010229 1.5e-10 68.9 82 51.2
CiPaw.15G084200 Carya illinoinensis HOM05D008456 ORTHO05D010229 4.5e-10 67.4 89 49.4
TAR622G0689 Trochodendron aralioides HOM05D008456 ORTHO05D010229 1.7e-09 65.5 51 64.7
Migut.E00334 Erythranthe guttata HOM05D008456 ORTHO05D010229 3.8e-09 64.3 36 80.6
TAR374G1021 Trochodendron aralioides HOM05D008456 ORTHO05D010229 3.8e-09 64.3 41 75.6
Medtr8g023670 Medicago truncatula HOM05D008456 ORTHO05D010229 1.1e-08 62.8 43 69.8
Nitab4.5_0003330g0080 Nicotiana tabacum HOM05D008456 ORTHO05D010229 1.1e-08 62.8 73 50.7
Potri.010G125700 Populus trichocarpa HOM05D008456 ORTHO05D010229 1.1e-08 62.8 41 73.2
Sc04g0006490 Simmondsia chinensis HOM05D008456 ORTHO05D010229 9.4e-08 59.7 86 50.0
Lj6C759T21 Lonicera japonica HOM05D000497 ORTHO05D002300 1.6e-07 58.9 62 51.6
Glyma.20G115200 Glycine max HOM05D008456 ORTHO05D010229 2.7e-07 58.2 67 47.8
FAN22G1960 Fragaria x ananassa HOM05D008456 ORTHO05D010229 7.9e-07 56.6 53 56.6
Migut.L01069 Erythranthe guttata HOM05D008456 ORTHO05D010229 1.4e-06 55.8 40 72.5
CiPaw.03G230800 Carya illinoinensis HOM05D008456 ORTHO05D010229 3.0e-06 54.7 36 72.2
THA.LOC104821939 Tarenaya hassleriana HOM05D011059 ORTHO05D010229 3.0e-06 54.7 58 51.7
FAN12G0383 Fragaria x ananassa HOM05D008456 ORTHO05D010229 3.9e-06 54.3 87 40.2
HanXRQChr16g0529291 Helianthus annuus HOM05D008456 ORTHO05D010229 8.8e-06 53.1 70 48.6


User provided reference genes

Program Settings