Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 5.1e-131 471.1 236 100.0
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 7.3e-130 467.2 236 98.7
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 2.7e-92 342.4 236 76.3
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 8.2e-89 330.9 236 75.0
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 8.2e-89 330.9 236 74.6
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 1.5e-82 310.1 239 72.4
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 4.3e-82 308.5 239 72.4
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 9.7e-82 307.4 238 72.7
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 2.4e-80 302.8 238 71.4
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 6.9e-80 301.2 238 70.6
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 1.9e-77 293.1 238 69.7
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 7.2e-77 291.2 242 66.5
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 7.9e-76 287.7 215 69.8
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 2.3e-75 286.2 241 65.1
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 3.0e-75 285.8 232 68.5
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 3.9e-75 285.4 210 71.0
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 5.1e-75 285.0 210 71.0
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 1.5e-74 283.5 215 68.4
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 1.5e-74 283.5 244 67.2
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 2.0e-74 283.1 218 70.6
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 5.7e-74 281.6 216 69.4
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 5.7e-74 281.6 235 67.2
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 9.7e-74 280.8 238 66.0
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 2.2e-73 279.6 243 64.2
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 3.7e-73 278.9 237 64.6
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 4.8e-73 278.5 234 66.2
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 4.8e-73 278.5 236 65.7
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 6.3e-73 278.1 187 77.0
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.1e-72 277.3 237 64.1
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 1.1e-72 277.3 231 65.4
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.4e-72 276.9 237 64.6
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 1.4e-72 276.9 185 76.2
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.8e-72 276.6 237 64.1
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 1.8e-72 276.6 243 65.0
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 3.1e-72 275.8 184 75.5
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 3.1e-72 275.8 220 67.7
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 4.1e-72 275.4 239 65.3
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 1.2e-71 273.9 232 64.2
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 1.2e-71 273.9 291 57.7
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 3.4e-71 272.3 207 70.0
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 4.5e-71 271.9 207 70.0
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 4.5e-71 271.9 237 63.7
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 4.5e-71 271.9 190 73.7
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 1.3e-70 270.4 207 69.1
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 3.8e-70 268.9 239 61.9
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 1.4e-69 266.9 191 73.8
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.9e-69 266.5 180 76.1
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 2.5e-69 266.2 241 64.3
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 2.5e-69 266.2 188 69.7
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 3.2e-69 265.8 240 62.1
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 9.4e-69 264.2 174 75.3
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.2e-68 263.8 180 75.6
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 2.1e-68 263.1 213 64.8
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 2.7e-68 262.7 172 76.7
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 3.6e-68 262.3 202 67.8
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 3.6e-68 262.3 180 75.6
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 1.0e-67 260.8 236 59.7
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 3.0e-67 259.2 188 73.9
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 3.9e-67 258.8 238 62.2
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 1.1e-66 257.3 170 74.7
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 1.1e-66 257.3 236 62.7
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 3.3e-66 255.8 191 67.5
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 2.2e-65 253.1 181 73.5
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 3.7e-65 252.3 188 71.8
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 4.8e-65 251.9 218 61.5
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 1.8e-64 250.0 192 69.8
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 2.4e-64 249.6 220 61.8
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 3.1e-64 249.2 268 54.1
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 4.1e-64 248.8 172 73.8
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 7.0e-64 248.1 246 58.5
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 9.1e-64 247.7 238 59.2
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 1.2e-63 247.3 185 69.2
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 2.0e-63 246.5 202 65.3
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 2.0e-63 246.5 172 72.7
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 2.0e-63 246.5 175 73.1
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 2.0e-63 246.5 220 60.5
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 4.5e-63 245.4 238 58.0
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 5.9e-63 245.0 238 58.4
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 1.3e-62 243.8 229 57.6
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 8.5e-62 241.1 246 55.7
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 3.2e-61 239.2 232 59.5
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 7.2e-61 238.0 198 64.6
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 9.4e-61 237.7 198 64.6
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 8.0e-60 234.6 201 58.7
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 4.0e-59 232.3 236 56.4
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 4.0e-59 232.3 236 56.4
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 4.0e-59 232.3 134 83.6
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 2.6e-58 229.6 183 65.6
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 2.8e-57 226.1 137 77.4
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 2.8e-57 226.1 284 48.6
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 6.5e-46 188.3 185 56.8
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 4.0e-43 179.1 157 57.3
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 7.0e-40 168.3 99 83.8
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 2.0e-39 166.8 99 79.8
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 3.6e-36 156.0 163 51.5
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 8.0e-36 154.8 196 44.4
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 1.8e-35 153.7 112 73.2
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 1.5e-34 150.6 98 75.5
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 8.3e-33 144.8 114 67.5
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 1.7e-30 137.1 150 48.7
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.1e-24 117.9 64 81.2
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 8.6e-22 108.2 62 80.6
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 1.1e-21 107.8 92 67.4
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 2.8e-20 103.2 88 67.0
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 4.7e-20 102.4 110 50.9
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 1.1e-19 101.3 111 52.3
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.0e-15 85.5 81 58.0
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 3.9e-14 82.8 61 72.1
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 2.5e-13 80.1 61 67.2
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 1.6e-12 77.4 87 56.3
MCO03G440 Micromonas commoda HOM05D007115 ORTHO05D008923 2.0e-10 70.5 156 32.7
FAN04G0070 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.6e-07 60.8 69 50.7
PRCOL_00005130 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 1.7e-06 57.4 106 31.1


User provided reference genes

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