Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028948 Camellia sinensis var. sinensis HOM05D005075 ORTHO05D007097 0.0e+00 1436.8 717 100.0
Rhsim12G0029800 Rhododendron simsii HOM05D005075 ORTHO05D007097 0.0e+00 1111.7 751 74.4
Hma1.2p1_0167F.1_g073740 Hydrangea macrophylla HOM05D005075 ORTHO05D007097 0.0e+00 1085.9 710 75.8
QL03p054705 Quercus lobata HOM05D005075 ORTHO05D007097 0.0e+00 1077.4 721 75.5
Dinv14804 Davidia involucrata HOM05D005075 ORTHO05D007097 0.0e+00 1076.2 714 76.2
Prupe.1G232900 Prunus persica HOM05D005075 ORTHO05D007097 9.8e-312 1073.2 680 77.8
MD13G1113200 Malus domestica HOM05D005075 ORTHO05D007097 5.4e-309 1063.9 711 74.4
TWI18G0401 Tripterygium wilfordii HOM05D005075 ORTHO05D007097 4.5e-308 1060.8 716 73.6
FvH4_4g24220 Fragaria vesca HOM05D005075 ORTHO05D007097 2.8e-305 1051.6 713 72.7
vmacro01083 Vaccinium macrocarpon HOM05D005075 ORTHO05D007097 2.8e-305 1051.6 760 70.8
GSVIVG01010340001 Vitis vinifera HOM05D005075 ORTHO05D007097 1.0e-304 1049.7 717 72.8
COL.COLO4_23627 Corchorus olitorius HOM05D005075 ORTHO05D007097 1.8e-304 1048.9 714 72.1
FAN07G0914 Fragaria x ananassa HOM05D005075 ORTHO05D007097 1.8e-304 1048.9 738 71.0
Haze_12371 Corylus avellana HOM05D005075 ORTHO05D007097 4.9e-302 1040.8 714 72.5
Thecc.02G274600 Theobroma cacao HOM05D005075 ORTHO05D007097 4.9e-302 1040.8 716 71.5
RcHm_v2.0_Chr4g0431061 Rosa chinensis HOM05D005075 ORTHO05D007097 1.9e-298 1028.9 680 74.4
Gorai.005G171200 Gossypium raimondii HOM05D005075 ORTHO05D007097 2.1e-297 1025.4 713 71.2
FAN12G0151 Fragaria x ananassa HOM05D005075 ORTHO05D007097 4.7e-297 1024.2 776 66.8
Gohir.A03G128400 Gossypium hirsutum HOM05D005075 ORTHO05D007097 2.3e-296 1021.9 713 71.1
Lj3A1065G86 Lonicera japonica HOM05D005075 ORTHO05D007097 6.4e-294 1013.8 721 71.8
CANSAT01G2132 Cannabis sativa HOM05D005075 ORTHO05D007097 1.8e-293 1012.3 712 69.8
Ciclev10030830m.g Citrus clementina HOM05D005075 ORTHO05D007097 3.2e-293 1011.5 711 70.9
DCAR_024086 Daucus carota HOM05D005075 ORTHO05D007097 1.0e-291 1006.5 689 72.7
PGR119G0347 Punica granatum HOM05D005075 ORTHO05D007097 1.3e-291 1006.1 716 70.4
HanXRQChr08g0233581 Helianthus annuus HOM05D005075 ORTHO05D007097 1.7e-291 1005.7 716 70.5
ECA233G3670 Erigeron canadensis HOM05D005075 ORTHO05D007097 6.6e-291 1003.8 654 74.6
Cpa.g.sc27.216 Carica papaya HOM05D005075 ORTHO05D007097 3.6e-289 998.0 721 69.8
Nn4g22400 Nelumbo nucifera HOM05D005075 ORTHO05D007097 3.4e-287 991.5 705 69.6
Aqoxy3G01457 Aquilegia oxysepala HOM05D005075 ORTHO05D007097 4.4e-287 991.1 682 72.1
Sabra08G0136200 Salix brachista HOM05D005075 ORTHO05D007097 2.9e-286 988.4 752 68.1
Cc11_g16630 Coffea canephora HOM05D005075 ORTHO05D007097 5.4e-285 984.2 715 67.7
MBI08_g36442_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 1.6e-284 982.6 677 71.3
Eucgr.H04663 Eucalyptus grandis HOM05D005075 ORTHO05D007097 2.7e-284 981.9 663 72.1
Lj3g0026022 Lotus japonicus HOM05D005075 ORTHO05D007097 2.8e-281 971.8 711 67.8
Glyma.11G248400 Glycine max HOM05D005075 ORTHO05D007097 6.2e-281 970.7 711 67.9
Phvul.001G259800 Phaseolus vulgaris HOM05D005075 ORTHO05D007097 8.1e-281 970.3 693 69.7
Ca_16480_v3 Cicer arietinum L. HOM05D005075 ORTHO05D007097 1.4e-280 969.5 700 68.1
VMungo1383G1024 Vigna mungo HOM05D005075 ORTHO05D007097 1.8e-280 969.1 710 68.3
THA.LOC104799053 Tarenaya hassleriana HOM05D005075 ORTHO05D007097 2.3e-280 968.8 710 67.6
PGSC0003DMG400022618 Solanum tuberosum HOM05D005075 ORTHO05D007097 4.0e-280 968.0 686 69.7
PSO782G5362 Papaver somniferum HOM05D005075 ORTHO05D007097 3.4e-279 964.9 715 68.4
Carub.0001s2573 Capsella rubella HOM05D005075 ORTHO05D007097 5.8e-279 964.1 674 69.6
Psat5g094520 Pisum sativum HOM05D005075 ORTHO05D007097 5.8e-279 964.1 710 67.6
AT1G24340 Arabidopsis thaliana HOM05D005075 ORTHO05D007097 9.9e-279 963.4 712 67.0
Lalb_Chr23g0277981 Lupinus albus HOM05D005075 ORTHO05D007097 1.3e-278 963.0 714 67.6
TPR.G22444 Trifolium pratense HOM05D005075 ORTHO05D007097 1.7e-278 962.6 716 66.9
Nitab4.5_0002129g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 4.9e-278 961.1 674 70.0
Sed0000829 Sechium edule HOM05D005075 ORTHO05D007097 1.1e-277 959.9 709 68.0
Solyc05g006810.4 Solanum lycopersicum HOM05D005075 ORTHO05D007097 1.1e-277 959.9 681 69.2
arahy.Tifrunner.gnm1.ann1.S726NC Arachis hypogaea HOM05D005075 ORTHO05D007097 1.4e-277 959.5 719 67.0
BcaC06g35258 Brassica carinata HOM05D005075 ORTHO05D007097 1.9e-277 959.1 674 69.6
MELO3C018283.2 Cucumis melo HOM05D005075 ORTHO05D007097 1.9e-277 959.1 711 67.7
Medtr3g085660 Medicago truncatula HOM05D005075 ORTHO05D007097 4.1e-277 958.0 738 65.2
CARHR026760 Cardamine hirsuta HOM05D005075 ORTHO05D007097 7.8e-276 953.7 674 68.8
A07p12060 Brassica napus HOM05D005075 ORTHO05D007097 1.7e-275 952.6 713 66.9
C07p18000 Brassica napus HOM05D005075 ORTHO05D007097 3.9e-275 951.4 674 68.8
BolC7t42310H Brassica oleracea HOM05D005075 ORTHO05D007097 3.9e-275 951.4 674 68.8
BraA07t28994Z Brassica rapa HOM05D005075 ORTHO05D007097 3.9e-275 951.4 713 66.9
Thhalv10006951m.g Eutrema salsugineum HOM05D005075 ORTHO05D007097 1.5e-274 949.5 711 66.4
Carub.0007s3241 Capsella rubella HOM05D005075 ORTHO05D007097 2.5e-274 948.7 713 66.3
CsaV3_5G015350 Cucumis sativus L. HOM05D005075 ORTHO05D007097 2.5e-274 948.7 711 67.7
ClCG06G008480 Citrullus lanatus HOM05D005075 ORTHO05D007097 3.3e-274 948.3 704 67.2
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 4.3e-274 948.0 674 68.4
AL1G40580 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 1.2e-273 946.4 712 65.7
Oeu056679.1 Olea europaea HOM05D005075 ORTHO05D007097 2.8e-273 945.3 708 65.4
Sp1g23430 Schrenkiella parvula HOM05D005075 ORTHO05D007097 8.9e-272 940.3 674 68.0
Nitab4.5_0000537g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 1.5e-271 939.5 703 67.1
SalBow1G5463 Salvia bowleyana HOM05D005075 ORTHO05D007097 2.2e-270 935.6 730 64.4
SalBow1G4350 Salvia bowleyana HOM05D005075 ORTHO05D007097 1.4e-269 932.9 730 64.2
arahy.Tifrunner.gnm1.ann1.I0S54J Arachis hypogaea HOM05D005075 ORTHO05D007097 1.9e-269 932.6 719 65.6
Migut.K00700 Erythranthe guttata HOM05D005075 ORTHO05D007097 4.1e-269 931.4 712 64.0
Aa31LG7G9750 Aethionema arabicum HOM05D005075 ORTHO05D007097 1.9e-266 922.5 670 67.6
Potri.008G178400 Populus trichocarpa HOM05D005075 ORTHO05D007097 2.5e-266 922.2 614 73.9
Hund25442 Selenicereus undatus HOM05D005075 ORTHO05D007097 9.9e-263 910.2 649 69.5
Nitab4.5_0001802g0060 Nicotiana tabacum HOM05D005075 ORTHO05D007097 3.8e-262 908.3 675 66.8
EL10Ac6g13442 Beta vulgaris HOM05D005075 ORTHO05D007097 4.6e-260 901.4 669 67.7
Peaxi162Scf00804g00120 Petunia axillaris HOM05D005075 ORTHO05D007097 1.7e-259 899.4 739 63.2
Manes.13G016100 Manihot esculenta HOM05D005075 ORTHO05D007097 9.6e-258 893.6 710 65.5
AUR62005575 Chenopodium quinoa HOM05D005075 ORTHO05D007097 1.5e-250 869.8 755 60.5
Lsat_1_v5_gn_8_149841 Lactuca sativa HOM05D005075 ORTHO05D007097 1.9e-250 869.4 1008 49.4
SGA_v2.0_scaffold14G07137 Striga asiatica HOM05D005075 ORTHO05D007097 5.8e-247 857.8 719 60.4
Zm00001eb014870 Zea mays HOM05D005075 ORTHO05D007097 2.9e-246 855.5 671 61.7
ATR0824G188 Amborella trichopoda HOM05D005075 ORTHO05D007097 3.7e-241 838.6 693 60.9
Peaxi162Scf00634g00011 Petunia axillaris HOM05D005075 ORTHO05D007097 1.1e-240 837.0 715 61.4
PSO063G5600 Papaver somniferum HOM05D005075 ORTHO05D007097 1.7e-238 829.7 620 67.9
Sc11g0000650 Simmondsia chinensis HOM05D005075 ORTHO05D007097 1.4e-237 826.6 548 73.4
Duzib251G0605 Durio zibethinus HOM05D005075 ORTHO05D007097 2.5e-234 815.8 716 60.1
TAR374G0458 Trochodendron aralioides HOM05D005075 ORTHO05D007097 5.7e-234 814.7 527 76.5
Cfa009316 Carpinus fangiana HOM05D005075 ORTHO05D007097 3.4e-231 805.4 530 75.7
Sopen05g002750 Solanum pennellii HOM05D005075 ORTHO05D007097 8.5e-230 800.8 571 68.7
AUR62024155 Chenopodium quinoa HOM05D005075 ORTHO05D007097 1.6e-228 796.6 631 64.2
CDE02G1220 Ceratophyllum demersum HOM05D005075 ORTHO05D007097 2.9e-222 775.8 697 56.4
Gohir.D02G152200 Gossypium hirsutum HOM05D005075 ORTHO05D007097 1.4e-221 773.5 515 72.8
Ah.03g133860 Amaranthus hybridus HOM05D005075 ORTHO05D007097 6.1e-212 741.5 684 57.6
SHI17941 Sapria himalayana HOM05D005075 ORTHO05D007097 1.3e-198 697.2 639 57.3
unitig_747.g21130 Utricularia gibba HOM05D005075 ORTHO05D007097 1.9e-197 693.3 579 60.1
Glyma.18G008800 Glycine max HOM05D005075 ORTHO05D007097 4.5e-183 645.6 430 72.3
Mapoly0042s0063 Marchantia polymorpha HOM05D005075 ORTHO05D007097 1.2e-175 620.9 651 48.1
SMO356G0356 Selaginella moellendorffii HOM05D005075 ORTHO05D007097 9.8e-170 601.3 673 47.7
CiPaw.05G114700 Carya illinoinensis HOM05D005075 ORTHO05D007097 8.3e-161 571.6 386 73.6
SEGI_08672 Sequoiadendron giganteum HOM05D005075 ORTHO05D007097 2.9e-153 546.6 406 63.5
HPP92_001259 Vanilla planifolia HOM05D005075 ORTHO05D007097 4.9e-145 519.2 369 66.9
Pp3c26_6380 Physcomitrium patens HOM05D005075 ORTHO05D007097 1.1e-136 491.5 526 47.0
CAN.G2246.1 Capsicum annuum HOM05D005075 ORTHO05D007097 3.1e-131 473.4 393 61.8
TPR.G9414 Trifolium pratense HOM05D005075 ORTHO05D007097 9.6e-125 451.8 389 59.1
TPR.G492 Trifolium pratense HOM05D005075 ORTHO05D007097 3.2e-120 436.8 325 67.1
Actinidia08085 Actinidia chinensis HOM05D005075 ORTHO05D007097 2.8e-116 423.7 327 68.2
AagrBONN_evm.TU.Sc2ySwM_228.4178 Anthoceros agrestis HOM05D005075 ORTHO05D007097 9.0e-115 418.7 439 48.3
CiPaw.05G114800 Carya illinoinensis HOM05D005075 ORTHO05D007097 2.3e-110 404.1 279 71.0
HPP92_001244 Vanilla planifolia HOM05D005075 ORTHO05D007097 1.4e-107 394.8 310 62.3
Os01g0901700 Oryza sativa ssp. japonica HOM05D005075 ORTHO05D007097 2.9e-105 387.1 277 66.4
MCO06G130 Micromonas commoda HOM05D005075 ORTHO05D007097 1.2e-95 355.1 619 37.3
PGSC0003DMG400021087 Solanum tuberosum HOM05D005075 ORTHO05D007097 8.0e-87 325.9 239 63.6
SEGI_28928 Sequoiadendron giganteum HOM05D005075 ORTHO05D007097 1.4e-86 325.1 353 50.4
Haze_02705 Corylus avellana HOM05D005075 ORTHO05D007097 8.3e-84 315.8 233 67.4
HPP92_001258 Vanilla planifolia HOM05D005075 ORTHO05D007097 3.4e-77 293.9 282 56.0
Atru.chr11.2265 Acer truncatum HOM05D005075 ORTHO05D007097 1.0e-70 272.3 434 38.7
Cre14.g630895 Chlamydomonas reinhardtii HOM05D005075 ORTHO05D007097 1.3e-68 265.4 682 31.7
CBR_g21048 Chara braunii HOM05D000019 ORTHO05D000002 3.7e-68 263.8 385 38.7
PRCOL_00001291 Prasinoderma coloniale HOM05D005075 ORTHO05D007097 8.0e-63 246.1 566 31.4
Atru.chr12.1465 Acer truncatum HOM05D005075 ORTHO05D007097 6.8e-46 189.9 354 39.5
Actinidia30671 Actinidia chinensis HOM05D005075 ORTHO05D007097 2.1e-42 178.3 112 81.2
Atru.chr11.2253 Acer truncatum HOM05D005075 ORTHO05D007097 6.0e-42 176.8 284 38.4
CAN.G27.28 Capsicum annuum HOM05D005075 ORTHO05D007097 5.6e-40 170.2 117 70.1
MBI07_g43659_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 4.7e-39 167.2 137 61.3
MD16G1112300 Malus domestica HOM05D005075 ORTHO05D007097 2.6e-37 161.4 103 78.6
MBI05_g16127_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 3.5e-34 151.0 215 41.4
MBI18_g19470_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 8.7e-33 146.4 223 39.5
Actinidia30670 Actinidia chinensis HOM05D005075 ORTHO05D007097 4.3e-32 144.1 125 60.8
MBI18_g03939_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 6.2e-31 140.2 220 39.5
Atru.chr11.2251 Acer truncatum HOM05D005075 ORTHO05D007097 3.8e-28 131.0 89 66.3
AagrBONN_evm.TU.Sc2ySwM_228.4177 Anthoceros agrestis HOM05D005075 ORTHO05D007097 5.8e-21 107.1 74 64.9
HPP92_001243 Vanilla planifolia HOM05D005075 ORTHO05D007097 1.7e-20 105.5 88 56.8
COL.COLO4_15613 Corchorus olitorius HOM05D005075 ORTHO05D162910 2.1e-18 98.6 436 24.8
Cfa026038 Carpinus fangiana HOM05D005075 ORTHO05D007097 7.4e-16 90.1 95 46.3
MD16G1112400 Malus domestica HOM05D005075 ORTHO05D007097 9.6e-16 89.7 157 42.7
Cfa025560 Carpinus fangiana HOM05D005075 ORTHO05D122628 1.6e-15 89.0 390 24.4
MBI16_g25874_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 3.1e-14 84.7 64 62.5
MD16G1112100 Malus domestica HOM05D005075 ORTHO05D037935 4.0e-14 84.3 60 76.7
MBI13_g10206_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 1.5e-13 82.4 46 76.1
Cfa026189 Carpinus fangiana HOM05D002287 ORTHO05D123242 2.0e-13 82.0 104 42.3
MBI18_g33166_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 3.4e-13 81.3 53 64.2
MBI18_g47010_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 5.8e-13 80.5 46 73.9
MBI18_g06981_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 6.5e-12 77.0 46 71.7
MBI18_g03943_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 3.2e-11 74.7 100 44.0
Oeu026858.1 Olea europaea HOM05D005505 ORTHO05D006974 2.1e-07 62.0 221 28.1
Sabra10G0048500 Salix brachista HOM05D005075 ORTHO05D007097 1.8e-06 58.9 35 74.3
Atru.chr11.2270 Acer truncatum HOM05D005075 ORTHO05D037935 9.0e-06 56.6 70 54.3


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