Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 6.8e-303 1043.1 500 100.0
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.3e-301 1036.2 500 99.4
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.4e-300 1033.5 500 99.2
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.9e-298 1027.3 500 98.8
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.9e-298 1027.3 500 98.6
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.1e-298 1026.9 500 98.6
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.9e-297 1025.0 500 98.4
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.3e-297 1023.1 500 97.6
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.1e-295 1019.2 500 97.8
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.6e-294 1014.6 500 97.2
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 6.4e-293 1010.0 500 96.8
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.4e-293 1009.6 500 96.8
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.7e-291 1004.6 500 96.6
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 4.2e-212 741.5 500 70.6
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 1.7e-208 729.6 509 69.4
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 1.7e-205 719.5 499 69.5
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 7.3e-204 714.1 502 68.1
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 4.4e-201 704.9 498 68.3
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 2.2e-200 702.6 499 68.3
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 1.6e-198 696.4 497 67.6
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 6.0e-198 694.5 474 69.8
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 3.0e-197 692.2 479 68.7
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 1.1e-196 690.3 504 68.1
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 6.2e-195 684.5 499 66.5
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 8.0e-195 684.1 498 65.5
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 1.4e-194 683.3 470 68.5
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 9.8e-193 677.2 497 66.2
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 9.8e-193 677.2 501 65.7
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 1.5e-188 663.3 497 65.0
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 2.1e-187 659.4 402 76.4
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 1.2e-185 653.7 503 64.2
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 2.0e-185 652.9 509 63.7
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 9.9e-185 650.6 496 63.5
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 6.4e-184 647.9 502 64.1
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 3.2e-183 645.6 404 74.5
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 3.5e-182 642.1 492 64.6
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 4.6e-182 641.7 400 74.8
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 4.6e-182 641.7 400 74.2
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 6.0e-182 641.3 360 80.8
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 1.0e-181 640.6 500 61.4
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 1.7e-181 639.8 494 62.8
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 2.3e-181 639.4 400 73.8
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 2.3e-181 639.4 502 62.5
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 6.6e-181 637.9 489 64.2
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 1.1e-180 637.1 494 62.1
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 1.5e-180 636.7 404 76.0
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 3.3e-180 635.6 499 62.3
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 5.6e-180 634.8 500 62.4
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 7.3e-180 634.4 500 63.2
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 1.2e-179 633.6 499 62.9
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 1.2e-179 633.6 398 74.6
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 2.8e-179 632.5 415 70.8
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 4.7e-179 631.7 494 63.0
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 2.0e-177 626.3 409 71.6
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 2.0e-177 626.3 501 62.1
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 2.9e-176 622.5 507 61.1
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 6.4e-176 621.3 405 70.1
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 1.1e-175 620.5 479 63.9
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 1.2e-174 617.1 498 61.2
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 1.2e-174 617.1 501 60.7
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 1.2e-174 617.1 500 59.8
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 1.2e-174 617.1 492 62.2
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 4.6e-174 615.1 492 61.0
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 6.0e-174 614.8 487 62.2
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 7.8e-174 614.4 378 73.5
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 1.3e-173 613.6 400 72.0
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 2.3e-173 612.8 495 59.2
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 3.3e-172 609.0 487 61.6
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 7.3e-172 607.8 400 69.8
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 2.8e-171 605.9 350 82.3
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 6.2e-171 604.7 400 70.8
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 6.2e-171 604.7 400 70.2
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 1.4e-170 603.6 402 69.9
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 4.0e-170 602.1 401 70.6
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 2.2e-168 596.3 506 59.5
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 2.9e-168 595.9 393 71.5
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 2.9e-168 595.9 396 71.0
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 3.2e-167 592.4 502 59.6
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 3.5e-166 589.0 403 68.0
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 5.6e-164 581.6 370 72.4
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 1.1e-162 577.4 499 56.9
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 4.6e-158 562.0 443 60.7
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 2.3e-157 559.7 372 69.9
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 6.7e-157 558.1 359 71.9
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 5.6e-156 555.1 478 57.9
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 1.6e-155 553.5 430 62.3
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 6.2e-155 551.6 391 66.0
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 1.4e-151 540.4 508 54.9
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 7.9e-150 534.6 350 70.0
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 1.8e-149 533.5 458 57.0
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 5.1e-149 531.9 489 57.1
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 3.1e-130 469.5 391 57.5
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 1.2e-129 467.6 386 58.8
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 1.3e-123 447.6 293 72.7
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 8.0e-118 428.3 353 59.8
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 1.1e-116 424.5 477 49.9
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 6.8e-109 398.7 407 49.4
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 2.5e-95 353.6 296 56.8
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 1.1e-90 338.2 209 74.6
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 2.8e-86 323.6 433 40.4
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 3.7e-83 313.2 443 40.4
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 3.9e-72 276.6 447 37.1
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 3.3e-63 246.9 302 44.4
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 9.6e-63 245.4 399 38.1
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 3.1e-61 240.4 162 69.8
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 5.5e-42 176.4 222 44.6
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 4.6e-41 173.3 322 31.1
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 2.4e-29 134.4 308 32.5
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 1.2e-28 132.1 100 66.0
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 1.5e-23 115.2 295 29.2
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 4.2e-18 97.1 73 64.4
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 6.7e-16 89.7 59 64.4
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 5.5e-10 70.1 89 40.4


User provided reference genes

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