Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028922 Camellia sinensis var. sinensis HOM05D000513 ORTHO05D003825 1.4e-22 109.0 67 100.0
Dinv26492 Davidia involucrata HOM05D000513 ORTHO05D003825 7.1e-14 80.1 58 65.5
GSVIVG01032233001 Vitis vinifera HOM05D000513 ORTHO05D003825 7.1e-14 80.1 60 76.7
Atru.chr7.995 Acer truncatum HOM05D000513 ORTHO05D003825 2.1e-13 78.6 60 65.0
Actinidia02548 Actinidia chinensis HOM05D000513 ORTHO05D003825 2.7e-13 78.2 60 63.3
Rhsim01G0106500 Rhododendron simsii HOM05D000513 ORTHO05D003825 2.7e-13 78.2 62 64.5
Nitab4.5_0000170g0160 Nicotiana tabacum HOM05D000513 ORTHO05D003825 4.6e-13 77.4 60 63.3
vmacro20744 Vaccinium macrocarpon HOM05D000513 ORTHO05D003825 4.6e-13 77.4 60 61.7
Cfa012887 Carpinus fangiana HOM05D000513 ORTHO05D003825 1.8e-12 75.5 60 56.7
Hma1.2p1_0411F.1_g147060 Hydrangea macrophylla HOM05D000513 ORTHO05D003825 1.8e-12 75.5 60 56.7
Sabra18G0126300 Salix brachista HOM05D000513 ORTHO05D003825 1.8e-12 75.5 62 58.1
Solyc07g042830.4 Solanum lycopersicum HOM05D000513 ORTHO05D003825 2.3e-12 75.1 60 61.7
Sopen07g022460 Solanum pennellii HOM05D000513 ORTHO05D003825 2.3e-12 75.1 60 61.7
TAR383G0183 Trochodendron aralioides HOM05D000513 ORTHO05D003825 3.0e-12 74.7 60 58.3
Cc06_g23740 Coffea canephora HOM05D000513 ORTHO05D003825 3.9e-12 74.3 60 56.7
Peaxi162Scf00474g00313 Petunia axillaris HOM05D000513 ORTHO05D003825 5.1e-12 73.9 58 62.1
Potri.018G149500 Populus trichocarpa HOM05D000513 ORTHO05D003825 6.7e-12 73.6 62 56.5
QL11p007112 Quercus lobata HOM05D000513 ORTHO05D003825 6.7e-12 73.6 60 56.7
Lsat_1_v5_gn_5_81081 Lactuca sativa HOM05D000513 ORTHO05D003825 8.7e-12 73.2 60 58.3
Nn8g41230 Nelumbo nucifera HOM05D000513 ORTHO05D003825 1.1e-11 72.8 60 53.3
SalBow6G1032 Salvia bowleyana HOM05D000513 ORTHO05D003825 1.5e-11 72.4 60 56.7
Lju50C25T2 Lonicera japonica HOM05D000513 ORTHO05D003825 2.5e-11 71.6 60 56.7
PGR044G0413 Punica granatum HOM05D000513 ORTHO05D003825 2.5e-11 71.6 60 58.3
MSTRG.19407 Avicennia marina HOM05D000513 ORTHO05D003825 3.3e-11 71.2 60 56.7
DCAR_020450 Daucus carota HOM05D000513 ORTHO05D003825 4.3e-11 70.9 60 56.7
Migut.J00854 Erythranthe guttata HOM05D000513 ORTHO05D003825 4.3e-11 70.9 60 55.0
HanXRQChr10g0309461 Helianthus annuus HOM05D000513 ORTHO05D003825 4.3e-11 70.9 60 56.7
Eucgr.C02159 Eucalyptus grandis HOM05D000513 ORTHO05D003825 7.4e-11 70.1 60 56.7
Oeu000959.1 Olea europaea HOM05D000513 ORTHO05D003825 7.4e-11 70.1 60 58.3
CiPaw.08G000700 Carya illinoinensis HOM05D000513 ORTHO05D003825 9.6e-11 69.7 57 56.1
Hund03216 Selenicereus undatus HOM05D000513 ORTHO05D003825 1.6e-10 68.9 60 55.0
PGSC0003DMG401013540 Solanum tuberosum HOM05D000513 ORTHO05D003825 2.8e-10 68.2 56 60.7
Haze_21252 Corylus avellana HOM05D000513 ORTHO05D003825 4.8e-10 67.4 66 68.2
MD13G1285500 Malus domestica HOM05D000513 ORTHO05D003825 6.2e-10 67.0 58 53.4
CDE06G1650 Ceratophyllum demersum HOM05D000513 ORTHO05D003825 8.2e-10 66.6 60 50.0
Prupe.6G144700 Prunus persica HOM05D000513 ORTHO05D003825 1.4e-09 65.9 58 51.7
Ah.11g043540 Amaranthus hybridus HOM05D000513 ORTHO05D003825 1.8e-09 65.5 58 53.4
CANSAT80G1561 Cannabis sativa HOM05D000513 ORTHO05D003825 3.1e-09 64.7 58 67.2
MBI16_g00829_MAGBIO Magnolia biondii HOM05D000513 ORTHO05D003825 3.1e-09 64.7 60 46.7
EL10Ac2g03611 Beta vulgaris HOM05D000513 ORTHO05D003825 4.0e-09 64.3 58 51.7
AUR62020744 Chenopodium quinoa HOM05D000513 ORTHO05D003825 1.2e-08 62.8 58 50.0
unitig_26.g9124 Utricularia gibba HOM05D000513 ORTHO05D003825 1.2e-08 62.8 40 67.5
FvH4_4g00200 Fragaria vesca HOM05D000513 ORTHO05D003825 1.5e-08 62.4 57 50.9
FAN12G3115 Fragaria x ananassa HOM05D000513 ORTHO05D003825 1.5e-08 62.4 57 50.9
AUR62027969 Chenopodium quinoa HOM05D000513 ORTHO05D003825 2.0e-08 62.0 58 50.0
RcHm_v2.0_Chr4g0384801 Rosa chinensis HOM05D000513 ORTHO05D003825 3.4e-08 61.2 57 49.1
FAN17G2564 Fragaria x ananassa HOM05D000513 ORTHO05D003825 1.0e-07 59.7 57 49.1
FAN22G1643 Fragaria x ananassa HOM05D000513 ORTHO05D003825 1.0e-07 59.7 57 49.1
SMO364G0449 Selaginella moellendorffii HOM05D000513 ORTHO05D003825 1.3e-07 59.3 59 47.5
AagrBONN_evm.TU.Sc2ySwM_344.145 Anthoceros agrestis HOM05D000513 ORTHO05D003825 2.9e-07 58.2 60 43.3
CSS0036876 Camellia sinensis var. sinensis HOM05D000513 ORTHO05D003825 4.2e-06 54.3 68 47.1


User provided reference genes

Program Settings