Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028921 Camellia sinensis var. sinensis HOM05D002225 ORTHO05D002271 1.7e-95 352.8 196 100.0
vmacro06892 Vaccinium macrocarpon HOM05D002225 ORTHO05D002271 1.4e-30 137.1 212 42.5
Actinidia31627 Actinidia chinensis HOM05D002225 ORTHO05D002271 1.2e-29 134.0 249 45.8
CSS0031158 Camellia sinensis var. sinensis HOM05D002225 ORTHO05D002271 1.6e-29 133.7 104 68.3
Actinidia13647 Actinidia chinensis HOM05D002225 ORTHO05D002271 3.3e-27 125.9 106 62.3
Rhsim03G0152600 Rhododendron simsii HOM05D002225 ORTHO05D002271 3.3e-27 125.9 214 44.4
Dinv21847 Davidia involucrata HOM05D002225 ORTHO05D002271 1.6e-26 123.6 104 58.7
Dinv34486 Davidia involucrata HOM05D002225 ORTHO05D002271 3.7e-26 122.5 102 59.8
Hma1.2p1_0264F.1_g106150 Hydrangea macrophylla HOM05D002225 ORTHO05D002271 8.2e-26 121.3 98 62.2
Rhsim03G0152200 Rhododendron simsii HOM05D002225 ORTHO05D002271 2.0e-24 116.7 92 66.3
Lj8A54T71 Lonicera japonica HOM05D002225 ORTHO05D002271 1.7e-23 113.6 105 61.9
GSVIVG01032672001 Vitis vinifera HOM05D002225 ORTHO05D002271 8.4e-23 111.3 105 59.0
HanXRQChr07g0204131 Helianthus annuus HOM05D002225 ORTHO05D002271 1.1e-17 94.4 110 47.3
TAR633G0281 Trochodendron aralioides HOM05D002225 ORTHO05D002271 1.4e-17 94.0 107 53.3
CANSAT56G2293 Cannabis sativa HOM05D002225 ORTHO05D002271 1.8e-17 93.6 113 46.9
Aqoxy4G02423 Aquilegia oxysepala HOM05D002225 ORTHO05D002271 6.9e-17 91.7 103 54.4
MD07G1233800 Malus domestica HOM05D002225 ORTHO05D002271 6.9e-17 91.7 110 50.9
Prupe.2G264200 Prunus persica HOM05D002225 ORTHO05D002271 1.2e-16 90.9 106 52.8
MD01G1167800 Malus domestica HOM05D002225 ORTHO05D002271 2.0e-16 90.1 107 48.6
TAR636G1271 Trochodendron aralioides HOM05D002225 ORTHO05D002271 2.0e-16 90.1 105 51.4
QL08p064862 Quercus lobata HOM05D002225 ORTHO05D002271 7.7e-16 88.2 108 51.9
TAR623G0431 Trochodendron aralioides HOM05D002225 ORTHO05D002271 2.9e-15 86.3 103 48.5
Ca_16865_v3 Cicer arietinum L. HOM05D002225 ORTHO05D002271 5.0e-15 85.5 103 47.6
Ca_29952_v3 Cicer arietinum L. HOM05D002225 ORTHO05D002271 5.0e-15 85.5 103 47.6
Nn5g26846 Nelumbo nucifera HOM05D002225 ORTHO05D002271 8.5e-15 84.7 104 50.0
Nn2g10301 Nelumbo nucifera HOM05D002225 ORTHO05D002271 1.4e-14 84.0 104 49.0
HanXRQChr15g0493731 Helianthus annuus HOM05D002225 ORTHO05D002271 2.5e-14 83.2 105 48.6
FAN01G0750 Fragaria x ananassa HOM05D002225 ORTHO05D002271 3.2e-14 82.8 111 48.6
FAN03G1063 Fragaria x ananassa HOM05D002225 ORTHO05D002271 3.2e-14 82.8 111 48.6
FAN10G3396 Fragaria x ananassa HOM05D002225 ORTHO05D002271 3.2e-14 82.8 111 48.6
COL.COLO4_19417 Corchorus olitorius HOM05D002225 ORTHO05D002271 9.4e-14 81.3 84 57.1
FvH4_7g25940 Fragaria vesca HOM05D002225 ORTHO05D002271 9.4e-14 81.3 111 47.7
FAN06G1908 Fragaria x ananassa HOM05D002225 ORTHO05D002271 9.4e-14 81.3 111 47.7
RcHm_v2.0_Chr1g0372321 Rosa chinensis HOM05D002225 ORTHO05D002271 1.6e-13 80.5 114 46.5
EL10Ac2g02646 Beta vulgaris HOM05D002225 ORTHO05D002271 2.1e-13 80.1 106 44.3
Duzib106G1786 Durio zibethinus HOM05D002225 ORTHO05D002271 4.6e-13 79.0 76 57.9
Lsat_1_v5_gn_2_126241 Lactuca sativa HOM05D002225 ORTHO05D002271 4.6e-13 79.0 85 54.1
Lsat_1_v5_gn_9_60121 Lactuca sativa HOM05D002225 ORTHO05D002271 6.1e-13 78.6 108 47.2
FAN03G2164 Fragaria x ananassa HOM05D002225 ORTHO05D002271 2.3e-12 76.6 111 46.8
Glyma.06G142700 Glycine max HOM05D002225 ORTHO05D002271 3.9e-12 75.9 76 55.3
PGR044G0456 Punica granatum HOM05D002225 ORTHO05D002271 3.9e-12 75.9 108 44.4
CiPaw.02G198900 Carya illinoinensis HOM05D002225 ORTHO05D002271 5.1e-12 75.5 108 47.2
ClCG07G005120 Citrullus lanatus HOM05D002225 ORTHO05D002271 5.1e-12 75.5 99 46.5
Sc11g0005850 Simmondsia chinensis HOM05D002225 ORTHO05D002271 5.1e-12 75.5 103 42.7
Glyma.04G222600 Glycine max HOM05D002225 ORTHO05D002271 6.7e-12 75.1 107 45.8
Eucgr.J00112 Eucalyptus grandis HOM05D002225 ORTHO05D002271 8.8e-12 74.7 107 44.9
Cfa001208 Carpinus fangiana HOM05D002225 ORTHO05D002271 1.1e-11 74.3 114 47.4
arahy.Tifrunner.gnm1.ann1.4SU7B4 Arachis hypogaea HOM05D002225 ORTHO05D002271 1.5e-11 73.9 85 49.4
arahy.Tifrunner.gnm1.ann1.L24DBG Arachis hypogaea HOM05D002225 ORTHO05D002271 1.5e-11 73.9 85 49.4
VMungo1309G0791 Vigna mungo HOM05D002225 ORTHO05D002271 1.5e-11 73.9 84 50.0
AUR62030609 Chenopodium quinoa HOM05D002225 ORTHO05D002271 2.0e-11 73.6 104 44.2
Gohir.A05G402900 Gossypium hirsutum HOM05D002225 ORTHO05D002271 2.0e-11 73.6 75 54.7
MBI15_g01600_MAGBIO Magnolia biondii HOM05D002225 ORTHO05D002271 2.0e-11 73.6 106 43.4
AUR62024935 Chenopodium quinoa HOM05D002225 ORTHO05D002271 2.5e-11 73.2 104 44.2
Haze_17358 Corylus avellana HOM05D002225 ORTHO05D002271 3.3e-11 72.8 115 46.1
VMungo1309G3021 Vigna mungo HOM05D002225 ORTHO05D002271 5.7e-11 72.0 76 51.3
PGSC0003DMG402011656 Solanum tuberosum HOM05D002225 ORTHO05D002271 7.4e-11 71.6 65 56.9
Psat5g068760 Pisum sativum HOM05D002225 ORTHO05D002271 9.7e-11 71.2 103 40.8
Phvul.009G043900 Phaseolus vulgaris HOM05D002225 ORTHO05D002271 1.7e-10 70.5 75 52.0
CsaV3_3G044610 Cucumis sativus L. HOM05D002225 ORTHO05D002271 2.2e-10 70.1 76 47.4
Gohir.D04G012600 Gossypium hirsutum HOM05D002225 ORTHO05D002271 2.8e-10 69.7 75 53.3
Gorai.012G014900 Gossypium raimondii HOM05D002225 ORTHO05D002271 2.8e-10 69.7 75 53.3
MELO3C018256.2 Cucumis melo HOM05D002225 ORTHO05D002271 3.7e-10 69.3 99 42.4
Sed0009031 Sechium edule HOM05D002225 ORTHO05D002271 3.7e-10 69.3 84 44.0
Gorai.013G006800 Gossypium raimondii HOM05D002225 ORTHO05D002271 6.3e-10 68.6 76 51.3
Solyc05g052220.3 Solanum lycopersicum HOM05D002225 ORTHO05D002271 6.3e-10 68.6 65 55.4
Sopen05g030760 Solanum pennellii HOM05D002225 ORTHO05D002271 6.3e-10 68.6 65 55.4
Gohir.A13G006400 Gossypium hirsutum HOM05D002225 ORTHO05D002271 8.2e-10 68.2 76 50.0
Manes.10G001500 Manihot esculenta HOM05D002225 ORTHO05D002271 1.1e-09 67.8 65 58.5
CiPaw.01G306700 Carya illinoinensis HOM05D002225 ORTHO05D002271 1.8e-09 67.0 117 43.6
Peaxi162Scf00167g01215 Petunia axillaris HOM05D002225 ORTHO05D002271 1.8e-09 67.0 67 59.7
Cc02_g05360 Coffea canephora HOM05D002225 ORTHO05D002271 2.4e-09 66.6 70 54.3
TPR.G16112 Trifolium pratense HOM05D002225 ORTHO05D002271 2.4e-09 66.6 61 57.4
PSO384G2911 Papaver somniferum HOM05D002225 ORTHO05D002271 3.1e-09 66.2 110 41.8
DCAR_018038 Daucus carota HOM05D002225 ORTHO05D002271 4.1e-09 65.9 109 44.0
TWI53G0084 Tripterygium wilfordii HOM05D002225 ORTHO05D002271 5.3e-09 65.5 117 40.2
Lj1g0007571 Lotus japonicus HOM05D002225 ORTHO05D002271 6.9e-09 65.1 103 38.8
Hund15816 Selenicereus undatus HOM05D002225 ORTHO05D002271 6.9e-09 65.1 110 39.1
Ah.10g026550 Amaranthus hybridus HOM05D002225 ORTHO05D002271 9.1e-09 64.7 99 37.4
Medtr3g093960 Medicago truncatula HOM05D002225 ORTHO05D002271 1.2e-08 64.3 103 41.7
Sabra19G0073700 Salix brachista HOM05D002225 ORTHO05D002271 1.5e-08 63.9 65 55.4
Cpa.g.sc19.56 Carica papaya HOM05D002225 ORTHO05D002271 2.0e-08 63.5 106 40.6
PSO339G3502 Papaver somniferum HOM05D002225 ORTHO05D002271 2.6e-08 63.2 109 40.4
CsaV3_5G010960 Cucumis sativus L. HOM05D002225 ORTHO05D002271 3.4e-08 62.8 76 44.7
Lalb_Chr08g0239171 Lupinus albus HOM05D002225 ORTHO05D002271 3.4e-08 62.8 101 38.6
Migut.F01243 Erythranthe guttata HOM05D002225 ORTHO05D002271 1.0e-07 61.2 100 42.0
Potri.019G058300 Populus trichocarpa HOM05D002225 ORTHO05D002271 1.0e-07 61.2 65 52.3
Oeu018735.1 Olea europaea HOM05D002225 ORTHO05D002271 1.1e-06 57.8 76 47.4
Thecc.10G179500 Theobroma cacao HOM05D002225 ORTHO05D002271 1.1e-06 57.8 77 48.1
ECA232G4636 Erigeron canadensis HOM05D002225 ORTHO05D002271 1.9e-06 57.0 89 40.4
SalBow5G4698 Salvia bowleyana HOM05D002225 ORTHO05D002271 1.9e-06 57.0 95 43.2
TWI73G0482 Tripterygium wilfordii HOM05D002225 ORTHO05D002271 3.2e-06 56.2 119 39.5


User provided reference genes

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