Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 3.9e-131 471.5 236 100.0
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 9.5e-130 466.8 236 98.7
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.6e-92 343.2 236 77.1
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 3.1e-88 328.9 236 74.6
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 3.1e-88 328.9 236 74.2
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 1.5e-82 310.1 239 73.2
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 9.7e-82 307.4 238 73.5
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 1.6e-81 306.6 239 72.0
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 4.1e-80 302.0 238 71.8
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 6.9e-80 301.2 238 71.4
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 1.4e-77 293.5 238 69.7
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 2.1e-76 289.7 242 65.7
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 1.0e-75 287.3 236 66.1
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 1.4e-75 287.0 210 71.9
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 2.3e-75 286.2 210 71.9
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 2.3e-75 286.2 241 66.0
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 6.7e-75 284.6 218 71.6
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 6.7e-75 284.6 232 69.0
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 1.1e-74 283.9 215 68.8
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 2.0e-74 283.1 244 67.2
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 2.5e-74 282.7 222 69.4
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 3.3e-74 282.3 216 69.4
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 3.3e-74 282.3 235 67.7
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 3.7e-73 278.9 187 77.5
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 3.7e-73 278.9 243 64.6
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 4.8e-73 278.5 185 77.3
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 6.3e-73 278.1 236 65.7
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 1.1e-72 277.3 184 76.6
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 1.1e-72 277.3 243 65.4
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 1.1e-72 277.3 220 68.6
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 1.4e-72 276.9 237 64.6
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 1.4e-72 276.9 224 67.4
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 2.4e-72 276.2 231 65.8
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 4.1e-72 275.4 237 64.1
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 5.3e-72 275.0 237 64.6
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.9e-72 274.6 237 64.1
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 1.2e-71 273.9 291 58.4
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 1.5e-71 273.5 207 71.0
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 1.5e-71 273.5 190 74.7
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 2.0e-71 273.1 207 71.0
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 2.0e-71 273.1 239 65.3
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 2.0e-71 273.1 232 64.7
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 5.9e-71 271.6 207 70.0
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 5.9e-71 271.6 236 64.8
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 7.7e-71 271.2 238 63.0
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 6.5e-70 268.1 211 70.6
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 1.4e-69 266.9 223 64.6
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.4e-69 266.9 180 76.1
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 3.2e-69 265.8 174 76.4
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 5.5e-69 265.0 188 69.7
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 5.5e-69 265.0 191 72.8
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 9.4e-69 264.2 180 75.6
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 1.2e-68 263.8 202 68.8
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 1.2e-68 263.8 213 65.3
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 2.7e-68 262.7 180 75.6
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 4.7e-68 261.9 236 60.2
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 6.1e-68 261.5 172 76.7
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 1.4e-67 260.4 180 75.6
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 2.3e-67 259.6 188 74.5
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 3.9e-67 258.8 180 75.0
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 1.1e-66 257.3 170 74.1
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 2.6e-66 256.1 191 68.1
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 1.7e-65 253.4 181 73.5
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 2.2e-65 253.1 188 71.8
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 2.8e-65 252.7 218 61.5
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 6.3e-65 251.5 192 70.8
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 1.4e-64 250.4 268 54.9
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 1.8e-64 250.0 220 62.3
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 4.1e-64 248.8 238 59.7
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 9.1e-64 247.7 185 69.7
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 1.2e-63 247.3 172 72.7
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 1.5e-63 246.9 202 65.8
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 2.6e-63 246.1 238 58.4
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 3.5e-63 245.7 238 58.8
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 4.5e-63 245.4 229 61.6
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 5.9e-63 245.0 172 71.5
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 7.7e-63 244.6 229 58.1
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 7.7e-63 244.6 175 72.0
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 1.0e-62 244.2 246 58.1
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 2.9e-62 242.7 246 56.5
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 1.1e-61 240.7 232 60.3
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 7.2e-61 238.0 198 65.2
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 7.2e-61 238.0 198 65.2
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 6.1e-60 235.0 201 58.7
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 2.3e-59 233.0 236 56.8
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 2.3e-59 233.0 236 56.8
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 1.1e-58 230.7 134 82.1
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 2.0e-58 229.9 183 66.1
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 9.7e-58 227.6 137 78.8
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 9.7e-58 227.6 284 49.3
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 6.5e-46 188.3 185 57.3
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 3.0e-43 179.5 157 58.0
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 9.1e-40 167.9 99 82.8
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 1.2e-39 167.5 99 79.8
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 2.8e-36 156.4 163 52.1
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 8.0e-36 154.8 196 44.9
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 8.0e-36 154.8 112 74.1
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 6.8e-35 151.8 98 76.5
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 3.7e-33 146.0 114 68.4
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 2.3e-30 136.7 150 48.0
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.1e-24 117.9 64 82.8
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 8.6e-22 108.2 62 82.3
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 1.1e-21 107.8 92 67.4
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 1.6e-20 104.0 110 51.8
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 2.8e-20 103.2 88 67.0
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 1.1e-19 101.3 111 52.3
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.0e-15 85.5 81 58.0
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 3.9e-14 82.8 61 72.1
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 1.1e-13 81.3 61 68.9
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 1.6e-12 77.4 87 56.3
MCO03G440 Micromonas commoda HOM05D007115 ORTHO05D008923 2.6e-10 70.1 156 33.3
FAN04G0070 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.1e-07 60.5 69 50.7
PRCOL_00005130 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 7.8e-07 58.5 106 32.1


User provided reference genes

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