Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 1.6e-89 332.8 178 100.0
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 1.6e-68 263.1 178 80.3
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 2.7e-68 262.3 181 77.3
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 3.5e-68 261.9 178 74.7
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 3.5e-68 261.9 178 75.8
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 4.6e-68 261.5 177 75.7
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 7.8e-68 260.8 178 75.3
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 1.3e-67 260.0 178 75.8
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 1.3e-67 260.0 178 75.8
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 3.0e-67 258.8 171 77.8
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 3.0e-67 258.8 178 77.5
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 3.9e-67 258.5 179 76.0
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 5.1e-67 258.1 178 75.3
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 5.1e-67 258.1 178 73.0
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 8.6e-67 257.3 180 76.7
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 1.9e-66 256.1 178 75.3
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 1.9e-66 256.1 171 77.2
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.9e-66 256.1 178 74.7
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 1.9e-66 256.1 178 74.7
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 2.5e-66 255.8 178 74.7
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 3.3e-66 255.4 178 73.6
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 4.3e-66 255.0 178 75.8
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 5.6e-66 254.6 173 74.0
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 7.3e-66 254.2 178 75.8
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 7.3e-66 254.2 176 75.0
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 7.3e-66 254.2 178 74.2
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 1.2e-65 253.4 178 73.0
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 1.6e-65 253.1 178 71.9
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 2.1e-65 252.7 179 74.3
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 2.1e-65 252.7 166 77.7
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 2.8e-65 252.3 180 75.0
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.8e-65 252.3 173 73.4
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 3.6e-65 251.9 178 72.5
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 3.6e-65 251.9 176 72.7
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 3.6e-65 251.9 178 73.0
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 4.7e-65 251.5 178 71.3
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 4.7e-65 251.5 180 73.3
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 4.7e-65 251.5 180 73.3
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 4.7e-65 251.5 180 73.3
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 4.7e-65 251.5 178 73.0
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 6.2e-65 251.1 178 72.5
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 6.2e-65 251.1 167 78.4
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 8.1e-65 250.8 178 71.9
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 8.1e-65 250.8 179 74.3
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 8.1e-65 250.8 179 74.3
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.1e-64 250.4 173 72.8
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 1.4e-64 250.0 178 71.3
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 2.4e-64 249.2 178 70.8
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 3.1e-64 248.8 178 74.2
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 3.1e-64 248.8 181 72.9
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 3.1e-64 248.8 178 70.2
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 4.0e-64 248.4 177 74.0
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 4.0e-64 248.4 166 75.3
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 5.2e-64 248.1 165 77.6
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 6.9e-64 247.7 178 71.9
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 6.9e-64 247.7 178 71.9
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 6.9e-64 247.7 178 73.6
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 6.9e-64 247.7 179 72.6
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 9.0e-64 247.3 178 72.5
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 9.0e-64 247.3 178 73.0
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.2e-63 246.9 178 73.0
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.2e-63 246.9 178 73.0
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 1.5e-63 246.5 176 72.2
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.5e-63 246.5 178 71.9
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 1.5e-63 246.5 153 81.0
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.5e-63 246.5 179 72.1
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 4.4e-63 245.0 178 69.1
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 4.4e-63 245.0 181 71.8
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 5.8e-63 244.6 178 69.1
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 5.8e-63 244.6 178 69.1
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 5.8e-63 244.6 178 72.5
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 5.8e-63 244.6 178 72.5
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 5.8e-63 244.6 178 72.5
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 5.8e-63 244.6 179 71.5
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 5.8e-63 244.6 178 70.2
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 7.6e-63 244.2 158 75.9
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 9.9e-63 243.8 178 68.5
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 9.9e-63 243.8 178 68.5
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 1.7e-62 243.0 174 70.1
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 1.7e-62 243.0 178 70.2
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.7e-62 243.0 153 76.5
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 2.2e-62 242.7 178 70.2
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 2.9e-62 242.3 156 78.8
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 3.8e-62 241.9 174 69.5
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 4.9e-62 241.5 174 69.5
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 4.9e-62 241.5 165 72.7
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 6.4e-62 241.1 174 69.5
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 1.1e-61 240.4 165 72.7
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 1.4e-61 240.0 151 79.5
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 2.1e-60 236.1 178 66.9
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 3.5e-60 235.3 178 68.5
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 3.5e-60 235.3 166 73.5
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 6.0e-60 234.6 175 69.1
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 7.8e-60 234.2 153 75.8
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 2.3e-59 232.6 165 72.7
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 3.9e-59 231.9 178 69.7
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 6.6e-59 231.1 153 72.5
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 3.6e-57 225.3 164 69.5
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 3.6e-57 225.3 151 75.5
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 1.1e-56 223.8 153 71.9
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 1.8e-56 223.0 177 65.5
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 9.0e-56 220.7 155 71.0
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 2.6e-55 219.2 157 71.3
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 2.2e-54 216.1 137 74.5
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 2.9e-54 215.7 166 65.7
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 6.4e-54 214.5 177 62.1
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 6.0e-52 208.0 131 77.9
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 3.9e-51 205.3 160 66.9
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 6.7e-51 204.5 152 67.1
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 8.7e-51 204.1 120 84.2
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 2.8e-49 199.1 151 70.2
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 6.2e-49 198.0 120 80.8
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 8.1e-49 197.6 120 81.7
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 2.4e-48 196.1 155 65.2
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 9.9e-47 190.7 153 61.4
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 6.4e-46 188.0 107 86.0
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 6.4e-46 188.0 153 64.7
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 5.5e-45 184.9 108 84.3
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 2.7e-44 182.6 107 84.1
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 1.0e-43 180.6 121 74.4
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 1.8e-43 179.9 152 58.6
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 8.7e-43 177.6 131 64.9
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 1.4e-40 170.2 129 69.0
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 1.8e-32 143.3 91 75.8
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 9.3e-29 131.0 123 49.6
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 3.7e-17 92.4 106 51.9
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 3.7e-09 65.9 118 44.1


User provided reference genes

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