Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028860 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.8e-51 205.7 109 100.0
CSS0031893 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.6e-45 185.3 109 91.7
CSS0019882 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.7e-39 165.2 109 84.4
CSS0041034 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 7.5e-37 157.1 109 80.7
CSS0036875 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.9e-32 142.5 109 73.4
CSS0018183 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 3.6e-31 138.3 111 70.3
CSS0048580 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 5.4e-27 124.4 74 89.2
CSS0048440 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 9.1e-27 123.6 109 65.1
CSS0021661 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.6e-26 122.9 74 87.8
CSS0009256 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.7e-25 119.4 74 85.1
CSS0049883 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.7e-25 119.4 74 85.1
CSS0037647 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 4.7e-23 111.3 66 87.9
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 3.0e-14 82.0 74 55.4
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 6.4e-12 74.3 75 60.0
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 5.4e-11 71.2 75 58.7
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 4.6e-10 68.2 67 59.7
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 9.5e-08 60.5 58 53.4
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 1.2e-07 60.1 57 54.4
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 1.6e-07 59.7 75 48.0
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 2.1e-07 59.3 75 48.0
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 2.8e-07 58.9 77 45.5
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 3.6e-07 58.5 75 48.0
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 1.1e-06 57.0 57 52.6
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 1.4e-06 56.6 74 45.9
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 2.3e-06 55.8 59 45.8
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 3.1e-06 55.5 76 50.0
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 3.1e-06 55.5 57 50.9
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 3.1e-06 55.5 62 51.6
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 4.0e-06 55.1 44 59.1
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 4.0e-06 55.1 44 59.1
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 4.0e-06 55.1 77 46.8
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 4.0e-06 55.1 75 44.0
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 5.2e-06 54.7 77 44.2
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 6.8e-06 54.3 62 50.0
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 8.9e-06 53.9 78 48.7


User provided reference genes

Program Settings