Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028810 Camellia sinensis var. sinensis HOM05D007927 ORTHO05D010029 8.5e-126 453.8 240 100.0
Dinv07117 Davidia involucrata HOM05D007927 ORTHO05D010029 5.4e-88 328.2 242 74.8
vmacro18670 Vaccinium macrocarpon HOM05D007927 ORTHO05D010029 1.1e-85 320.5 241 73.9
Dinv24372 Davidia involucrata HOM05D007927 ORTHO05D010029 6.2e-84 314.7 241 73.0
Rhsim08G0002700 Rhododendron simsii HOM05D007927 ORTHO05D010029 8.0e-84 314.3 241 73.0
Hma1.2p1_0476F.1_g160770 Hydrangea macrophylla HOM05D007927 ORTHO05D010029 1.1e-80 303.9 241 70.5
TAR628G1503 Trochodendron aralioides HOM05D007927 ORTHO05D010029 9.5e-77 290.8 246 67.1
Lj4A837T13 Lonicera japonica HOM05D007927 ORTHO05D010029 1.8e-75 286.6 242 69.4
Actinidia01389 Actinidia chinensis HOM05D007927 ORTHO05D010029 5.2e-75 285.0 242 69.4
ClCG02G000450 Citrullus lanatus HOM05D007927 ORTHO05D010029 1.3e-73 280.4 240 65.8
CiPaw.04G081700 Carya illinoinensis HOM05D007927 ORTHO05D010029 4.9e-73 278.5 255 65.1
CsaV3_2G019410 Cucumis sativus L. HOM05D007927 ORTHO05D010029 3.2e-72 275.8 244 64.3
QL10p043457 Quercus lobata HOM05D007927 ORTHO05D010029 4.1e-72 275.4 260 63.5
Ciclev10002360m.g Citrus clementina HOM05D007927 ORTHO05D010029 5.4e-72 275.0 251 62.9
Atru.chr4.915 Acer truncatum HOM05D007927 ORTHO05D010029 1.2e-71 273.9 249 65.1
PGR102G3035 Punica granatum HOM05D007927 ORTHO05D010029 2.7e-71 272.7 247 65.6
TWI75G1488 Tripterygium wilfordii HOM05D007927 ORTHO05D010029 2.7e-71 272.7 229 68.6
Lsat_1_v5_gn_5_69000 Lactuca sativa HOM05D007927 ORTHO05D010029 8.6e-70 267.7 217 70.5
Nn1g06275 Nelumbo nucifera HOM05D007927 ORTHO05D010029 8.6e-70 267.7 186 75.8
Thecc.01G133600 Theobroma cacao HOM05D007927 ORTHO05D010029 1.1e-69 267.3 246 65.9
GSVIVG01026475001 Vitis vinifera HOM05D007927 ORTHO05D010029 1.1e-69 267.3 160 84.4
DCAR_014334 Daucus carota HOM05D007927 ORTHO05D010029 1.5e-69 266.9 244 65.2
COL.COLO4_35756 Corchorus olitorius HOM05D007927 ORTHO05D010029 1.9e-69 266.5 257 61.5
Manes.13G085601 Manihot esculenta HOM05D007927 ORTHO05D010029 7.3e-69 264.6 241 63.9
Prupe.4G271700 Prunus persica HOM05D007927 ORTHO05D010029 9.5e-69 264.2 245 64.1
VMungo0251G0724 Vigna mungo HOM05D007927 ORTHO05D010029 9.5e-69 264.2 203 69.5
Ca_17635_v3 Cicer arietinum L. HOM05D007927 ORTHO05D010029 1.6e-68 263.5 155 83.9
Psat7g045960 Pisum sativum HOM05D007927 ORTHO05D010029 1.6e-68 263.5 223 65.9
Eucgr.J01289 Eucalyptus grandis HOM05D007927 ORTHO05D010029 2.8e-68 262.7 237 64.1
TPR.G37352 Trifolium pratense HOM05D007927 ORTHO05D010029 2.8e-68 262.7 189 71.4
Gohir.D09G003800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 3.6e-68 262.3 244 63.5
MBI03_g37385_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 4.7e-68 261.9 185 75.7
MBI03_g42544_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 4.7e-68 261.9 185 75.7
Phvul.002G272300 Phaseolus vulgaris HOM05D007927 ORTHO05D010029 4.7e-68 261.9 204 68.6
Gohir.A09G004300 Gossypium hirsutum HOM05D007927 ORTHO05D010029 6.2e-68 261.5 241 64.3
Duzib264G0901 Durio zibethinus HOM05D007927 ORTHO05D010029 8.1e-68 261.2 249 63.1
Medtr8g093750 Medicago truncatula HOM05D007927 ORTHO05D010029 1.1e-67 260.8 189 72.0
MD01G1005400 Malus domestica HOM05D007927 ORTHO05D010029 1.4e-67 260.4 232 62.5
FAN28G0845 Fragaria x ananassa HOM05D007927 ORTHO05D010029 8.9e-67 257.7 225 64.0
FvH4_1g24440 Fragaria vesca HOM05D007927 ORTHO05D010029 2.0e-66 256.5 189 71.4
FAN19G2953 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.0e-66 256.5 189 71.4
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 2.6e-66 256.1 155 82.6
Glyma.05G191900 Glycine max HOM05D007927 ORTHO05D010029 3.4e-66 255.8 239 61.5
Lj4g0020524 Lotus japonicus HOM05D007927 ORTHO05D010029 4.4e-66 255.4 230 62.2
Potri.005G063600 Populus trichocarpa HOM05D007927 ORTHO05D010029 4.4e-66 255.4 184 73.4
RcHm_v2.0_Chr2g0121541 Rosa chinensis HOM05D007927 ORTHO05D010029 5.8e-66 255.0 188 70.2
ECA233G3055 Erigeron canadensis HOM05D007927 ORTHO05D010029 7.6e-66 254.6 217 62.7
ATR0584G243 Amborella trichopoda HOM05D007927 ORTHO05D010029 3.8e-65 252.3 183 72.1
Aqoxy5G02324 Aquilegia oxysepala HOM05D007927 ORTHO05D010029 4.9e-65 251.9 187 70.6
HanXRQChr12g0380561 Helianthus annuus HOM05D007927 ORTHO05D010029 3.2e-64 249.2 235 63.0
Haze_25255 Corylus avellana HOM05D007927 ORTHO05D010029 1.2e-63 247.3 266 57.5
CDE02G1961 Ceratophyllum demersum HOM05D007927 ORTHO05D010029 3.5e-63 245.7 219 63.5
Cpa.g.sc42.162 Carica papaya HOM05D007927 ORTHO05D010029 1.7e-62 243.4 187 69.0
Lalb_Chr07g0184391 Lupinus albus HOM05D007927 ORTHO05D010029 5.1e-62 241.9 189 67.7
Gorai.006G005200 Gossypium raimondii HOM05D007927 ORTHO05D010029 1.1e-61 240.7 236 60.6
FAN23G1573 Fragaria x ananassa HOM05D007927 ORTHO05D010029 7.3e-61 238.0 232 60.3
FAN26G1905 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.4e-59 233.0 295 51.2
MELO3C023232.2 Cucumis melo HOM05D007927 ORTHO05D010029 5.8e-58 228.4 222 60.8
Os12g0189700 Oryza sativa ssp. japonica HOM05D007927 ORTHO05D010029 9.9e-58 227.6 159 71.1
SEGI_35752 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 3.9e-54 215.7 222 56.8
AagrBONN_evm.TU.Sc2ySwM_344.4939 Anthoceros agrestis HOM05D007927 ORTHO05D010029 8.1e-52 208.0 163 63.2
Pp3c24_20210 Physcomitrium patens HOM05D007927 ORTHO05D010029 1.2e-50 204.1 155 65.2
Lj4C838G8 Lonicera japonica HOM05D007927 ORTHO05D010029 1.3e-46 190.7 242 53.3
Mapoly0115s0058 Marchantia polymorpha HOM05D007927 ORTHO05D010029 3.9e-46 189.1 144 64.6
Sabra07G0086100 Salix brachista HOM05D007927 ORTHO05D010029 2.9e-41 172.9 96 85.4
Sabra05G0052800 Salix brachista HOM05D007927 ORTHO05D010029 4.5e-34 149.1 198 48.0
SEGI_09554 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 1.6e-31 140.6 89 78.7
FAN23G0137 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.6e-26 123.2 135 51.9
FAN19G2631 Fragaria x ananassa HOM05D007927 ORTHO05D010029 5.9e-26 122.1 172 46.5
Cre01.g055151 Chlamydomonas reinhardtii HOM05D007927 ORTHO05D010029 1.3e-20 104.4 135 40.7
Gohir.D01G107700 Gossypium hirsutum HOM05D005170 ORTHO05D010029 5.1e-14 82.4 49 79.6
Gohir.D09G047700 Gossypium hirsutum HOM05D007927 ORTHO05D010029 5.1e-14 82.4 80 61.2
Gorai.010G138300 Gossypium raimondii HOM05D007927 ORTHO05D010029 6.7e-14 82.0 47 83.0
Gohir.D03G074800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 8.8e-14 81.6 46 84.8
Gohir.D06G120200 Gossypium hirsutum HOM05D005170 ORTHO05D010029 1.1e-13 81.3 118 43.2
Sabra07G0086200 Salix brachista HOM05D007927 ORTHO05D010029 9.7e-13 78.2 141 46.1
FvH4_1g24060 Fragaria vesca HOM05D007927 ORTHO05D010029 3.7e-12 76.3 48 77.1
Gorai.009G413100 Gossypium raimondii HOM05D007927 ORTHO05D010029 6.3e-12 75.5 47 76.6
Gohir.D04G109100 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.5e-10 70.9 47 74.5
Pp3c2_6800 Physcomitrium patens HOM05D019817 ORTHO05D016515 8.0e-07 58.5 170 26.5
SEGI_14611 Sequoiadendron giganteum HOM05D019817 ORTHO05D016515 8.0e-07 58.5 94 34.0
Mapoly0178s0020 Marchantia polymorpha HOM05D019817 ORTHO05D016515 1.0e-06 58.2 92 34.8
PRCOL_00005335 Prasinoderma coloniale HOM05D016266 ORTHO05D019595 6.7e-06 55.5 94 28.7
Gohir.D11G266900 Gossypium hirsutum HOM05D005170 ORTHO05D006985 8.8e-06 55.1 29 89.7


User provided reference genes

Program Settings