Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028806 Camellia sinensis var. sinensis HOM05D003051 ORTHO05D113591 1.1e-49 199.5 95 100.0
CSS0004660 Camellia sinensis var. sinensis HOM05D003051 ORTHO05D003932 9.1e-15 83.6 46 93.5
CSS0032175 Camellia sinensis var. sinensis HOM05D003051 ORTHO05D003932 2.7e-14 82.0 56 78.6
CSS0012370 Camellia sinensis var. sinensis HOM05D003051 ORTHO05D003932 4.5e-14 81.3 51 84.3
CSS0004006 Camellia sinensis var. sinensis HOM05D003051 ORTHO05D003932 2.9e-13 78.6 50 86.0
CSS0022220 Camellia sinensis var. sinensis HOM05D003051 ORTHO05D003932 8.0e-11 70.5 43 83.7
ECA232G4354 Erigeron canadensis HOM05D003051 ORTHO05D003932 1.3e-08 63.2 57 56.1
vmacro22602 Vaccinium macrocarpon HOM05D003051 ORTHO05D003932 1.4e-07 59.7 44 61.4
Oeu040325.1 Olea europaea HOM05D003051 ORTHO05D003932 1.8e-07 59.3 46 60.9
Hund22046 Selenicereus undatus HOM05D003051 ORTHO05D003932 1.8e-07 59.3 53 58.5
Sc02g0008680 Simmondsia chinensis HOM05D003051 ORTHO05D003932 2.4e-07 58.9 53 58.5
DCAR_009317 Daucus carota HOM05D003051 ORTHO05D003932 3.1e-07 58.5 57 52.6
Dinv36492 Davidia involucrata HOM05D003051 ORTHO05D003932 5.4e-07 57.8 53 60.4
HanXRQChr05g0134541 Helianthus annuus HOM05D003051 ORTHO05D003932 5.4e-07 57.8 57 50.9
HanXRQChr05g0134611 Helianthus annuus HOM05D003051 ORTHO05D003932 5.4e-07 57.8 57 50.9
Dinv37116 Davidia involucrata HOM05D003051 ORTHO05D003932 7.0e-07 57.4 54 57.4
Hma1.2p1_0343F.1_g131030 Hydrangea macrophylla HOM05D003051 ORTHO05D003932 7.0e-07 57.4 47 59.6
Hma1.2p1_2677F.1_g326730 Hydrangea macrophylla HOM05D003051 ORTHO05D003932 7.0e-07 57.4 47 59.6
Lsat_1_v5_gn_8_62240 Lactuca sativa HOM05D003051 ORTHO05D003932 9.2e-07 57.0 57 52.6
Rhsim10G0081500 Rhododendron simsii HOM05D003051 ORTHO05D003932 1.2e-06 56.6 51 56.9
vmacro18084 Vaccinium macrocarpon HOM05D003051 ORTHO05D003932 1.2e-06 56.6 42 61.9
Actinidia17302 Actinidia chinensis HOM05D003051 ORTHO05D003932 1.6e-06 56.2 56 53.6
Peaxi162Scf00699g00636 Petunia axillaris HOM05D003051 ORTHO05D003932 1.6e-06 56.2 56 57.1
ClCG08G016130 Citrullus lanatus HOM05D003051 ORTHO05D003932 2.0e-06 55.8 51 58.8
HanXRQChr05g0150761 Helianthus annuus HOM05D003051 ORTHO05D003932 2.0e-06 55.8 57 49.1
DCAR_020911 Daucus carota HOM05D003051 ORTHO05D003932 2.7e-06 55.5 57 49.1
Ciclev10025496m.g Citrus clementina HOM05D003051 ORTHO05D003932 3.5e-06 55.1 46 60.9
Gohir.A10G001900 Gossypium hirsutum HOM05D003051 ORTHO05D003932 3.5e-06 55.1 53 56.6
MSTRG.20290 Avicennia marina HOM05D003051 ORTHO05D003932 4.5e-06 54.7 46 58.7
Cc11_g04320 Coffea canephora HOM05D003051 ORTHO05D003932 5.9e-06 54.3 41 68.3
COL.COLO4_31149 Corchorus olitorius HOM05D003051 ORTHO05D003932 5.9e-06 54.3 53 56.6
Nitab4.5_0001579g0140 Nicotiana tabacum HOM05D003051 ORTHO05D003932 5.9e-06 54.3 56 57.1
Gohir.A10G159000 Gossypium hirsutum HOM05D003051 ORTHO05D003932 7.8e-06 53.9 51 56.9
Gorai.011G091200 Gossypium raimondii HOM05D003051 ORTHO05D003932 7.8e-06 53.9 51 56.9
Lsat_1_v5_gn_5_96860 Lactuca sativa HOM05D003051 ORTHO05D003932 7.8e-06 53.9 51 56.9
Hund25238 Selenicereus undatus HOM05D003051 ORTHO05D003932 7.8e-06 53.9 42 69.0


User provided reference genes

Program Settings