Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028801 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 4.0e-90 334.7 166 100.0
CSS0048603 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 1.3e-19 100.5 55 87.3
Rhsim03G0237500 Rhododendron simsii HOM05D002350 ORTHO05D000091 9.4e-15 84.3 64 64.1
Actinidia32657 Actinidia chinensis HOM05D002350 ORTHO05D000091 3.6e-14 82.4 59 64.4
Sc08g0007950 Simmondsia chinensis HOM05D002350 ORTHO05D000091 6.3e-11 71.6 54 68.5
GSVIVG01015313001 Vitis vinifera HOM05D002350 ORTHO05D000091 1.4e-10 70.5 54 63.0
TAR624G0664 Trochodendron aralioides HOM05D002350 ORTHO05D000091 1.8e-10 70.1 64 57.8
Lj4C392G1 Lonicera japonica HOM05D002350 ORTHO05D000091 4.1e-10 68.9 55 67.3
CiPaw.03G226000 Carya illinoinensis HOM05D002350 ORTHO05D000091 2.0e-09 66.6 54 61.1
Lj7C663T4 Lonicera japonica HOM05D002350 ORTHO05D000091 2.0e-09 66.6 64 60.9
MELO3C015406.2 Cucumis melo HOM05D002350 ORTHO05D000091 3.4e-09 65.9 82 47.6
ClCG03G016200 Citrullus lanatus HOM05D002350 ORTHO05D000091 7.7e-09 64.7 65 55.4
Sed0013258 Sechium edule HOM05D002350 ORTHO05D000091 7.7e-09 64.7 65 56.9
CANSAT56G4254 Cannabis sativa HOM05D002350 ORTHO05D000091 1.0e-08 64.3 55 60.0
Haze_25814 Corylus avellana HOM05D002350 ORTHO05D000091 1.0e-08 64.3 54 63.0
MBI04_g30106_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 1.0e-08 64.3 82 46.3
Cfa003192 Carpinus fangiana HOM05D002350 ORTHO05D000091 1.7e-08 63.5 54 61.1
DCAR_018431 Daucus carota HOM05D002350 ORTHO05D000091 1.7e-08 63.5 64 54.7
QL02p042039 Quercus lobata HOM05D002350 ORTHO05D000091 2.2e-08 63.2 55 58.2
Haze_25813 Corylus avellana HOM05D002350 ORTHO05D000091 6.5e-08 61.6 54 61.1
Cpa.g.sc40.69 Carica papaya HOM05D002350 ORTHO05D000091 8.5e-08 61.2 66 47.0
CsaV3_1G039730 Cucumis sativus L. HOM05D002350 ORTHO05D000091 8.5e-08 61.2 66 56.1
Dinv41662 Davidia involucrata HOM05D002350 ORTHO05D000091 8.5e-08 61.2 64 56.2
CANSAT56G1437 Cannabis sativa HOM05D002350 ORTHO05D000091 1.1e-07 60.8 64 53.1
Rhsim03G0237700 Rhododendron simsii HOM05D002350 ORTHO05D000091 1.4e-07 60.5 64 54.7
Ciclev10007331m.g Citrus clementina HOM05D002350 ORTHO05D000091 1.9e-07 60.1 55 54.5
Nn8g39091 Nelumbo nucifera HOM05D002350 ORTHO05D000091 3.2e-07 59.3 58 53.4
Cfa003194 Carpinus fangiana HOM05D002350 ORTHO05D000091 4.2e-07 58.9 54 57.4
Nitab4.5_0000165g0040 Nicotiana tabacum HOM05D002350 ORTHO05D000091 9.4e-07 57.8 33 78.8
Nitab4.5_0001354g0010 Nicotiana tabacum HOM05D002350 ORTHO05D000091 9.4e-07 57.8 33 78.8
Glyma.01G008700 Glycine max HOM05D002350 ORTHO05D000091 1.2e-06 57.4 54 51.9
Aqoxy6G02291 Aquilegia oxysepala HOM05D002350 ORTHO05D000091 1.6e-06 57.0 55 49.1
Os01g0198100 Oryza sativa ssp. japonica HOM05D002350 ORTHO05D000091 2.1e-06 56.6 55 50.9
PSO832G0190 Papaver somniferum HOM05D002350 ORTHO05D000091 2.7e-06 56.2 83 42.2
Sopen06g017060 Solanum pennellii HOM05D002350 ORTHO05D000091 2.7e-06 56.2 64 54.7
Solyc06g051190.3 Solanum lycopersicum HOM05D002350 ORTHO05D000091 3.6e-06 55.8 64 54.7
Peaxi162Scf00824g00114 Petunia axillaris HOM05D002350 ORTHO05D000091 4.7e-06 55.5 33 72.7
Aa31LG8G16870 Aethionema arabicum HOM05D002350 ORTHO05D000091 6.1e-06 55.1 73 42.5
DCAR_018379 Daucus carota HOM05D002350 ORTHO05D000091 6.1e-06 55.1 68 45.6
Duzib150G1289 Durio zibethinus HOM05D002350 ORTHO05D000091 6.1e-06 55.1 55 49.1
Duzib168G1106 Durio zibethinus HOM05D002350 ORTHO05D000091 6.1e-06 55.1 56 53.6
Lalb_Chr14g0371831 Lupinus albus HOM05D002350 ORTHO05D000091 6.1e-06 55.1 54 51.9
Hund26256 Selenicereus undatus HOM05D002350 ORTHO05D000091 6.1e-06 55.1 55 54.5
DCAR_010692 Daucus carota HOM05D002350 ORTHO05D000091 7.9e-06 54.7 55 47.3
ECA234G0874 Erigeron canadensis HOM05D002350 ORTHO05D000091 7.9e-06 54.7 51 51.0


User provided reference genes

Program Settings