Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 2.1e-191 672.2 339 100.0
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 9.0e-190 666.8 339 99.1
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 3.0e-108 396.0 310 68.1
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 5.8e-104 381.7 274 75.5
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 6.0e-93 345.1 328 61.3
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 8.1e-90 334.7 314 62.1
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 3.8e-87 325.9 299 59.5
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 6.7e-76 288.5 319 54.5
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 2.0e-72 276.9 341 50.4
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 3.5e-69 266.2 314 51.3
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 3.9e-68 262.7 323 49.2
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 6.7e-68 261.9 317 49.8
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.9e-67 260.4 326 49.7
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 2.5e-67 260.0 326 49.4
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 4.3e-67 259.2 338 47.0
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 1.6e-66 257.3 321 48.3
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 3.7e-66 256.1 321 48.0
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 2.0e-64 250.4 319 51.1
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 3.8e-63 246.1 327 49.2
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 5.5e-62 242.3 307 51.5
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 1.2e-61 241.1 324 47.8
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 7.9e-61 238.4 320 46.9
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 1.0e-60 238.0 323 47.4
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 1.8e-60 237.3 320 46.6
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 3.0e-60 236.5 320 47.2
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 6.9e-57 225.3 319 46.7
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 6.9e-57 225.3 257 52.9
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 9.1e-57 224.9 320 45.9
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 1.2e-56 224.6 318 45.3
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 2.6e-56 223.4 316 46.5
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 1.0e-55 221.5 320 44.7
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 2.2e-55 220.3 330 44.8
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 2.9e-55 219.9 309 46.6
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 5.5e-54 215.7 351 44.2
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 3.6e-53 213.0 321 42.1
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 6.7e-52 208.8 275 48.0
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 4.4e-51 206.1 324 44.8
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 2.2e-50 203.8 301 44.9
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 3.1e-49 199.9 320 43.8
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 3.1e-49 199.9 315 44.4
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 4.1e-49 199.5 308 44.2
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 1.2e-48 198.0 294 44.2
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 2.0e-48 197.2 314 41.7
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 2.6e-48 196.8 321 43.9
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 3.5e-48 196.4 315 43.5
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 7.7e-48 195.3 320 42.8
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 2.2e-47 193.7 322 42.9
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 2.2e-47 193.7 315 43.2
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 3.8e-47 193.0 312 40.4
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 6.5e-47 192.2 316 41.8
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 4.2e-46 189.5 317 42.6
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 9.4e-46 188.3 354 39.8
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 1.6e-45 187.6 307 41.7
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 4.7e-45 186.0 319 41.1
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 1.4e-44 184.5 354 39.5
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 3.0e-44 183.3 295 41.7
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 8.8e-44 181.8 253 49.0
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 3.3e-43 179.9 322 39.4
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 1.4e-41 174.5 326 39.9
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 5.3e-41 172.6 311 39.2
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 9.1e-41 171.8 307 39.7
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 2.9e-39 166.8 303 39.9
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 3.2e-38 163.3 265 40.0
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 4.2e-38 162.9 319 39.8
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 2.7e-37 160.2 317 41.0
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 3.6e-37 159.8 346 37.6
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 3.0e-36 156.8 319 37.0
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 3.0e-36 156.8 319 37.0
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 4.0e-36 156.4 237 41.8
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 3.3e-35 153.3 330 36.4
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 3.3e-35 153.3 330 36.4
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 1.7e-34 151.0 306 38.9
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 1.7e-34 151.0 338 36.7
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 6.3e-34 149.1 205 46.8
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 1.1e-33 148.3 300 38.0
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 1.8e-33 147.5 299 36.5
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 2.4e-33 147.1 302 38.7
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 2.0e-32 144.1 304 39.1
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 4.5e-32 142.9 311 36.7
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 1.3e-31 141.4 319 37.0
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 8.3e-26 122.1 289 35.3
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 1.8e-25 120.9 198 42.9
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 2.0e-24 117.5 243 38.3
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 4.7e-21 106.3 352 30.7
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 1.5e-19 101.3 328 33.2
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 2.2e-18 97.4 262 34.7
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 7.0e-17 92.4 157 40.8
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 3.5e-16 90.1 351 28.5
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 1.2e-13 81.6 327 29.4
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 4.0e-12 76.6 158 36.7
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 4.0e-12 76.6 328 28.7
MBI04_g32200_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 2.0e-11 74.3 83 49.4
Aqoxy1G00983 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 1.4e-09 68.2 196 32.1
Zm00001eb251400 Zea mays HOM05D007538 ORTHO05D009464 6.0e-08 62.8 228 28.1
ATR0829G194 Amborella trichopoda HOM05D007538 ORTHO05D009464 9.5e-06 55.5 67 43.3


User provided reference genes

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