Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028767 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.5e-37 159.1 85 100.0
CSS0035418 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.5e-37 159.1 85 100.0
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 8.7e-17 90.1 85 64.7
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.8e-14 82.4 86 61.6
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 4.1e-14 81.3 84 57.1
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 9.0e-14 80.1 85 57.6
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 2.0e-13 79.0 86 55.8
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 1.7e-12 75.9 86 59.3
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.4e-11 72.8 77 58.4
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 3.2e-11 71.6 86 55.8
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 9.4e-11 70.1 76 57.9
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 2.7e-10 68.6 86 50.0
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 2.7e-10 68.6 86 50.0
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 2.7e-10 68.6 72 59.7
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 2.7e-10 68.6 72 59.7
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 3.6e-10 68.2 77 57.1
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 7.9e-10 67.0 78 53.8
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 7.9e-10 67.0 85 50.6
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 1.4e-09 66.2 79 49.4
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 2.3e-09 65.5 100 48.0
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 5.1e-09 64.3 77 57.1
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 5.1e-09 64.3 77 54.5
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 8.8e-09 63.5 85 50.6
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 2.5e-08 62.0 91 47.3
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 5.7e-08 60.8 87 49.4
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 5.7e-08 60.8 85 47.1
Lj5g0006065 Lotus japonicus HOM05D003686 ORTHO05D004322 7.4e-08 60.5 84 46.4
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 7.4e-08 60.5 102 49.0
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 7.4e-08 60.5 85 49.4
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 1.3e-07 59.7 81 49.4
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 3.7e-07 58.2 100 45.0
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 4.8e-07 57.8 62 62.9
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 6.3e-07 57.4 102 45.1
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 1.1e-06 56.6 88 50.0
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 2.4e-06 55.5 75 50.7
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 3.1e-06 55.1 101 41.6
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 4.1e-06 54.7 86 46.5
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 6.9e-06 53.9 69 49.3


User provided reference genes

Program Settings