Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028745 Camellia sinensis var. sinensis HOM05D002553 ORTHO05D002767 1.3e-78 296.2 141 100.0
CSS0035336 Camellia sinensis var. sinensis HOM05D002553 ORTHO05D002767 6.8e-75 283.9 135 100.0
Actinidia19805 Actinidia chinensis HOM05D002553 ORTHO05D002767 3.9e-46 188.3 140 70.0
vmacro19642 Vaccinium macrocarpon HOM05D002553 ORTHO05D002767 9.6e-37 157.1 145 60.7
Peaxi162Scf01441g00005 Petunia axillaris HOM05D002553 ORTHO05D002767 2.5e-29 132.5 138 48.6
Phvul.006G093922 Phaseolus vulgaris HOM05D002553 ORTHO05D002767 4.3e-29 131.7 141 50.4
TPR.G33193 Trifolium pratense HOM05D002553 ORTHO05D002767 3.7e-28 128.6 138 49.3
Glyma.19G237200 Glycine max HOM05D002553 ORTHO05D002767 4.8e-28 128.3 141 48.9
Medtr7g113850 Medicago truncatula HOM05D002553 ORTHO05D002767 1.4e-27 126.7 139 48.9
QL03p004484 Quercus lobata HOM05D002553 ORTHO05D002767 1.8e-27 126.3 148 45.3
Cc02_g32700 Coffea canephora HOM05D002553 ORTHO05D002767 2.4e-27 125.9 138 50.7
RcHm_v2.0_Chr3g0454111 Rosa chinensis HOM05D002553 ORTHO05D002767 3.1e-27 125.6 144 48.6
Nitab4.5_0001510g0020 Nicotiana tabacum HOM05D002553 ORTHO05D002767 4.1e-27 125.2 137 48.2
TWI56G0412 Tripterygium wilfordii HOM05D002553 ORTHO05D002767 4.1e-27 125.2 136 52.2
VMungo0540G2049 Vigna mungo HOM05D002553 ORTHO05D002767 6.9e-27 124.4 141 48.2
Rhsim05G0144400 Rhododendron simsii HOM05D002553 ORTHO05D002767 9.1e-27 124.0 118 60.2
Ca_09373_v3 Cicer arietinum L. HOM05D002553 ORTHO05D002767 2.0e-26 122.9 139 46.8
Glyma.03G240200 Glycine max HOM05D002553 ORTHO05D002767 2.6e-26 122.5 141 46.1
Thecc.05G308100 Theobroma cacao HOM05D002553 ORTHO05D002767 2.6e-26 122.5 150 45.3
Nitab4.5_0000176g0030 Nicotiana tabacum HOM05D002553 ORTHO05D002767 3.4e-26 122.1 137 48.9
FvH4_6g05341 Fragaria vesca HOM05D002553 ORTHO05D002767 4.5e-26 121.7 141 46.1
ClCG02G016020 Citrullus lanatus HOM05D002553 ORTHO05D002767 5.9e-26 121.3 139 51.8
Potri.005G039000 Populus trichocarpa HOM05D002553 ORTHO05D002767 7.7e-26 120.9 154 46.8
Nn1g02088 Nelumbo nucifera HOM05D002553 ORTHO05D002767 1.0e-25 120.6 155 44.5
Sc09g0003350 Simmondsia chinensis HOM05D002553 ORTHO05D002767 1.0e-25 120.6 136 49.3
PGSC0003DMG400018888 Solanum tuberosum HOM05D002553 ORTHO05D002767 1.0e-25 120.6 145 45.5
CiPaw.07G014700 Carya illinoinensis HOM05D002553 ORTHO05D002767 1.7e-25 119.8 165 40.6
DCAR_029434 Daucus carota HOM05D002553 ORTHO05D002767 2.2e-25 119.4 141 45.4
GSVIVG01000009001 Vitis vinifera HOM05D002553 ORTHO05D002767 2.9e-25 119.0 135 48.1
Lj1g0019778 Lotus japonicus HOM05D002553 ORTHO05D002767 3.8e-25 118.6 143 44.8
FAN05G5165 Fragaria x ananassa HOM05D002553 ORTHO05D002767 5.0e-25 118.2 141 45.4
FAN05G4192 Fragaria x ananassa HOM05D002553 ORTHO05D002767 8.5e-25 117.5 141 45.4
Sed0024851 Sechium edule HOM05D002553 ORTHO05D002767 1.1e-24 117.1 146 47.9
CAN.G271.6 Capsicum annuum HOM05D000541 ORTHO05D000137 1.9e-24 116.3 137 46.7
COL.COLO4_13516 Corchorus olitorius HOM05D002553 ORTHO05D002767 2.5e-24 115.9 144 45.8
CANSAT25G3036 Cannabis sativa HOM05D002553 ORTHO05D002767 4.2e-24 115.2 135 48.1
Gorai.004G243500 Gossypium raimondii HOM05D002553 ORTHO05D002767 4.2e-24 115.2 138 45.7
Manes.09G163850 Manihot esculenta HOM05D002553 ORTHO05D002767 4.2e-24 115.2 154 44.8
Psat3g010200 Pisum sativum HOM05D002553 ORTHO05D002767 4.2e-24 115.2 137 47.4
FAN02G2444 Fragaria x ananassa HOM05D002553 ORTHO05D002767 7.2e-24 114.4 144 43.1
Gohir.D08G229300 Gossypium hirsutum HOM05D002553 ORTHO05D002767 9.4e-24 114.0 135 45.9
HanXRQChr14g0445961 Helianthus annuus HOM05D002553 ORTHO05D002767 9.4e-24 114.0 135 45.9
Solyc10g009400.3 Solanum lycopersicum HOM05D002553 ORTHO05D002767 9.4e-24 114.0 135 45.9
Sopen10g005180 Solanum pennellii HOM05D002553 ORTHO05D002767 9.4e-24 114.0 135 45.9
Sabra05G0037600 Salix brachista HOM05D002553 ORTHO05D002767 1.2e-23 113.6 157 43.9
Gohir.A08G212300 Gossypium hirsutum HOM05D002553 ORTHO05D002767 1.6e-23 113.2 138 44.9
Atru.chr2.474 Acer truncatum HOM05D002553 ORTHO05D002767 2.1e-23 112.8 138 45.7
arahy.Tifrunner.gnm1.ann1.Y4B2Z0 Arachis hypogaea HOM05D002553 ORTHO05D002767 3.6e-23 112.1 135 49.6
MD04G1209100 Malus domestica HOM05D002553 ORTHO05D002767 3.6e-23 112.1 135 46.7
THA.LOC104818678 Tarenaya hassleriana HOM05D002553 ORTHO05D002767 3.6e-23 112.1 137 45.3
arahy.Tifrunner.gnm1.ann1.NG2XET Arachis hypogaea HOM05D002553 ORTHO05D002767 4.6e-23 111.7 135 49.6
ECA238G2267 Erigeron canadensis HOM05D002553 ORTHO05D002767 4.6e-23 111.7 137 46.0
Lalb_Chr15g0077101 Lupinus albus HOM05D002553 ORTHO05D002767 4.6e-23 111.7 136 47.1
MSTRG.16234 Avicennia marina HOM05D002553 ORTHO05D002767 1.0e-22 110.5 135 48.9
AUR62005108 Chenopodium quinoa HOM05D002553 ORTHO05D002767 1.0e-22 110.5 141 48.9
Lj7C475G4 Lonicera japonica HOM05D002553 ORTHO05D002767 1.4e-22 110.2 135 47.4
Prupe.6G330100 Prunus persica HOM05D002553 ORTHO05D002767 1.4e-22 110.2 143 45.5
Duzib177G0165 Durio zibethinus HOM05D002553 ORTHO05D002767 1.8e-22 109.8 158 43.7
Phvul.006G093933 Phaseolus vulgaris HOM05D002553 ORTHO05D002767 2.3e-22 109.4 141 44.0
Ciclev10003913m.g Citrus clementina HOM05D002553 ORTHO05D002767 3.9e-22 108.6 135 43.0
TAR633G1107 Trochodendron aralioides HOM05D002553 ORTHO05D002767 3.9e-22 108.6 165 39.4
EL10Ac4g09309 Beta vulgaris HOM05D002553 ORTHO05D002767 1.1e-21 107.1 143 47.6
Haze_04234 Corylus avellana HOM05D002553 ORTHO05D002767 1.5e-21 106.7 143 39.2
Cfa006549 Carpinus fangiana HOM05D002553 ORTHO05D002767 2.6e-21 105.9 145 39.3
CDE08G1662 Ceratophyllum demersum HOM05D002553 ORTHO05D002767 3.7e-20 102.1 135 43.7
Cpa.g.sc48.13 Carica papaya HOM05D002553 ORTHO05D002767 4.8e-20 101.7 115 48.7
AL6G39610 Arabidopsis lyrata HOM05D002553 ORTHO05D002767 6.3e-20 101.3 137 45.3
AT5G27400 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 1.4e-19 100.1 135 43.0
AT5G27410 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 1.4e-19 100.1 135 43.0
CARHR186000 Cardamine hirsuta HOM05D002553 ORTHO05D002767 1.8e-19 99.8 135 45.2
AUR62000868 Chenopodium quinoa HOM05D002553 ORTHO05D002767 1.8e-19 99.8 139 45.3
Thhalv10003627m.g Eutrema salsugineum HOM05D002553 ORTHO05D002767 5.3e-19 98.2 135 42.2
Oeu057684.1 Olea europaea HOM05D002553 ORTHO05D002767 5.3e-19 98.2 135 45.2
Sp2g20630 Schrenkiella parvula HOM05D002553 ORTHO05D002767 5.3e-19 98.2 135 45.2
PGR031G3980 Punica granatum HOM05D002553 ORTHO05D002767 6.9e-19 97.8 135 41.5
PSO210G0829 Papaver somniferum HOM05D002553 ORTHO05D002767 1.5e-18 96.7 155 39.4
Carub.0006s2514 Capsella rubella HOM05D002553 ORTHO05D002767 2.0e-18 96.3 135 42.2
PSO832G1112 Papaver somniferum HOM05D002553 ORTHO05D002767 2.0e-18 96.3 156 39.7
BcaNung02464 Brassica carinata HOM05D002553 ORTHO05D002767 2.6e-18 95.9 136 41.2
C07p40730 Brassica napus HOM05D002553 ORTHO05D002767 2.6e-18 95.9 136 41.2
BolC7t44601H Brassica oleracea HOM05D002553 ORTHO05D002767 2.6e-18 95.9 136 41.2
BcaNung04367 Brassica carinata HOM05D002553 ORTHO05D002767 7.7e-18 94.4 135 41.5
Aqoxy1G02454 Aquilegia oxysepala HOM05D002553 ORTHO05D002767 1.0e-17 94.0 151 37.7
A06p37580 Brassica napus HOM05D002553 ORTHO05D002767 1.0e-17 94.0 136 42.6
BraA06t26677Z Brassica rapa HOM05D002553 ORTHO05D002767 1.0e-17 94.0 136 42.6
ATR0626G345 Amborella trichopoda HOM05D002553 ORTHO05D002767 1.3e-17 93.6 166 39.2
HPP92_017205 Vanilla planifolia HOM05D002553 ORTHO05D002767 6.5e-17 91.3 135 43.0
Aa31LG11G9180 Aethionema arabicum HOM05D002553 ORTHO05D002767 2.5e-16 89.4 136 43.4
Migut.M00920 Erythranthe guttata HOM05D002553 ORTHO05D002767 2.5e-16 89.4 135 41.5
Dinv40259 Davidia involucrata HOM05D002553 ORTHO05D002767 3.2e-16 89.0 80 53.8
MBI17_g29610_MAGBIO Magnolia biondii HOM05D002553 ORTHO05D002767 7.2e-16 87.8 189 36.5
Lsat_1_v5_gn_2_67941 Lactuca sativa HOM05D002553 ORTHO05D002767 3.0e-14 82.4 54 59.3
Hma1.2p1_0666F.1_g199460 Hydrangea macrophylla HOM05D002553 ORTHO05D002767 8.8e-14 80.9 43 81.4
SEGI_18575 Sequoiadendron giganteum HOM05D002553 ORTHO05D002767 2.6e-13 79.3 135 37.0
Zm00001eb417780 Zea mays HOM05D002553 ORTHO05D002767 9.7e-13 77.4 133 34.6
Hund07046 Selenicereus undatus HOM05D002553 ORTHO05D002767 8.2e-12 74.3 116 44.0
SGA_v2.0_scaffold1G00162 Striga asiatica HOM05D002553 ORTHO05D002767 7.0e-11 71.2 113 44.2
FAN14G0929 Fragaria x ananassa HOM05D002553 ORTHO05D002767 1.1e-08 63.9 137 36.5
Pp3c27_4830 Physcomitrium patens HOM05D002553 ORTHO05D002767 2.5e-08 62.8 131 34.4
Mapoly0153s0022 Marchantia polymorpha HOM05D002553 ORTHO05D002767 1.2e-07 60.5 140 30.0
SMO307G0066 Selaginella moellendorffii HOM05D002553 ORTHO05D002767 1.6e-07 60.1 50 56.0


User provided reference genes

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