Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 3.2e-65 251.5 120 100.0
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 1.8e-60 235.7 120 91.7
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 3.4e-59 231.5 120 89.2
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 1.7e-58 229.2 120 86.7
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 1.7e-58 229.2 120 88.3
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 2.2e-58 228.8 120 86.7
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 3.8e-58 228.0 120 88.3
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 1.9e-57 225.7 118 88.1
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 5.5e-57 224.2 120 85.8
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 9.3e-57 223.4 120 87.5
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 2.1e-56 222.2 120 85.8
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 2.7e-56 221.9 120 85.0
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 7.9e-56 220.3 119 84.9
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 1.3e-55 219.5 120 85.0
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 1.3e-55 219.5 120 85.0
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 1.3e-55 219.5 119 84.9
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 3.9e-55 218.0 134 82.8
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 3.9e-55 218.0 120 85.0
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 3.9e-55 218.0 120 83.3
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 3.9e-55 218.0 120 85.0
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 5.1e-55 217.6 120 81.7
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 5.1e-55 217.6 121 86.0
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 8.7e-55 216.9 119 84.0
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 8.7e-55 216.9 120 82.5
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 8.7e-55 216.9 119 84.0
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 1.5e-54 216.1 120 81.7
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 1.5e-54 216.1 119 84.0
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 1.5e-54 216.1 119 84.0
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 1.9e-54 215.7 120 83.3
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 2.5e-54 215.3 120 82.5
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 2.5e-54 215.3 120 83.3
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 3.3e-54 214.9 120 83.3
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 7.4e-54 213.8 119 82.4
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 9.7e-54 213.4 120 82.5
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 9.7e-54 213.4 120 84.2
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 9.7e-54 213.4 120 83.3
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 1.3e-53 213.0 127 81.1
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 2.2e-53 212.2 120 80.8
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 3.7e-53 211.5 120 82.5
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 3.7e-53 211.5 123 85.4
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 1.1e-52 209.9 120 80.0
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 2.4e-52 208.8 118 81.4
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 2.4e-52 208.8 120 82.5
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 2.4e-52 208.8 118 81.4
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 2.4e-52 208.8 118 81.4
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 6.9e-52 207.2 119 83.2
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 6.9e-52 207.2 123 83.7
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 9.0e-52 206.8 120 78.3
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 4.5e-51 204.5 120 80.0
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 4.5e-51 204.5 121 81.8
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 5.9e-51 204.1 120 77.5
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 7.7e-51 203.8 122 81.1
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 7.7e-51 203.8 122 81.1
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 7.7e-51 203.8 122 81.1
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 1.0e-50 203.4 116 80.2
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 2.2e-50 202.2 120 80.0
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 2.9e-50 201.8 121 80.2
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 3.8e-50 201.4 122 80.3
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 1.1e-49 199.9 122 80.3
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 5.5e-49 197.6 116 77.6
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 5.5e-49 197.6 118 76.3
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 5.5e-49 197.6 115 78.3
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 7.2e-49 197.2 116 77.6
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 7.2e-49 197.2 116 77.6
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 7.2e-49 197.2 116 77.6
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 7.2e-49 197.2 116 77.6
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 7.2e-49 197.2 116 77.6
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 7.2e-49 197.2 118 78.8
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 1.6e-48 196.1 116 76.7
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 1.6e-48 196.1 116 76.7
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 2.1e-48 195.7 116 76.7
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 2.1e-48 195.7 116 76.7
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 3.6e-48 194.9 116 75.9
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 4.6e-48 194.5 116 75.9
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 4.6e-48 194.5 116 75.9
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 4.6e-48 194.5 116 75.9
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 1.4e-47 193.0 116 76.7
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 1.8e-47 192.6 119 77.3
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 5.1e-47 191.0 125 73.6
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 5.1e-47 191.0 116 75.0
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 8.8e-47 190.3 125 74.4
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 2.5e-46 188.7 120 75.0
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 1.1e-44 183.3 91 93.4
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 4.5e-43 177.9 130 69.2
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 2.2e-42 175.6 87 88.5
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 2.9e-42 175.3 91 85.7
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 1.1e-41 173.3 92 89.1
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 2.5e-41 172.2 88 86.4
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 3.2e-41 171.8 115 70.4
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 9.4e-41 170.2 118 69.5
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 1.2e-40 169.9 91 84.6
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 1.4e-39 166.4 101 77.2
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 1.8e-39 166.0 91 82.4
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 4.4e-38 161.4 88 84.1
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 7.4e-38 160.6 88 85.2
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 1.3e-37 159.8 98 79.6
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 3.7e-37 158.3 91 78.0
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 4.8e-37 157.9 115 67.8
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 4.8e-37 157.9 115 67.8
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 6.3e-37 157.5 88 76.1
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 8.2e-37 157.1 86 82.6
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 1.1e-36 156.8 115 62.6
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 9.1e-36 153.7 76 90.8
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 1.2e-35 153.3 86 80.2
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 1.5e-35 152.9 86 80.2
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 1.5e-35 152.9 86 80.2
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 2.0e-35 152.5 88 78.4
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 3.8e-34 148.3 90 77.8
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 6.5e-34 147.5 88 76.1
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 1.1e-33 146.7 77 87.0
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 2.5e-33 145.6 84 78.6
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 2.5e-33 145.6 100 69.0
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 5.5e-33 144.4 101 69.3
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 1.5e-30 136.3 97 71.1
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 1.0e-26 123.6 88 64.8
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 2.6e-22 109.0 65 72.3
TAR633G1413 Trochodendron aralioides HOM05D002509 ORTHO05D002758 3.7e-21 105.1 54 87.0
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 3.8e-18 95.1 120 48.3
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 8.0e-16 87.4 110 41.8
CBR_g8310 Chara braunii HOM05D006449 ORTHO05D007995 2.3e-15 85.9 115 41.7
Cre17.g734628 Chlamydomonas reinhardtii HOM05D006449 ORTHO05D007995 2.0e-14 82.8 128 39.1
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 1.7e-13 79.7 146 36.3
MSTRG.19181 Avicennia marina HOM05D006449 ORTHO05D007995 1.0e-10 70.5 33 97.0
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 5.5e-09 64.7 30 86.7
Thhalv10009663m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 3.6e-08 62.0 31 90.3
unitig_75.g29315 Utricularia gibba HOM05D006449 ORTHO05D007995 3.4e-06 55.5 25 96.0


User provided reference genes

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