Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 1.4e-99 366.3 194 100.0
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 7.0e-78 294.3 194 79.9
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 1.1e-72 276.9 189 76.7
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 2.0e-72 276.2 189 78.3
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 3.3e-72 275.4 189 75.7
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 8.2e-71 270.8 188 76.1
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 1.4e-70 270.0 189 74.6
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 2.4e-70 269.2 189 74.1
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.7e-69 265.8 188 72.3
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 4.5e-69 265.0 189 74.6
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 6.5e-68 261.2 189 72.5
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.9e-67 259.6 189 72.5
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 2.5e-67 259.2 189 71.4
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 4.2e-67 258.5 189 74.1
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 4.2e-67 258.5 189 72.0
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 7.2e-67 257.7 189 72.0
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 7.2e-67 257.7 189 72.5
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 9.4e-67 257.3 188 71.3
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 2.1e-66 256.1 189 72.0
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 2.7e-66 255.8 189 70.9
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 2.7e-66 255.8 189 71.4
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 1.8e-65 253.1 189 69.3
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 4.0e-65 251.9 188 69.1
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 5.2e-65 251.5 189 68.8
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 5.2e-65 251.5 189 70.4
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 6.8e-65 251.1 189 69.3
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 8.8e-65 250.8 189 72.5
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 2.6e-64 249.2 189 69.8
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 2.6e-64 249.2 198 68.7
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 2.6e-64 249.2 189 68.8
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 4.4e-64 248.4 189 68.3
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 5.7e-64 248.1 189 68.3
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 7.5e-64 247.7 189 69.8
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 2.2e-63 246.1 189 68.3
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 2.8e-63 245.7 189 67.2
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 4.8e-63 245.0 189 67.7
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 6.3e-63 244.6 189 67.7
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 1.1e-62 243.8 200 63.5
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.4e-62 243.4 189 66.1
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 1.4e-62 243.4 189 66.7
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 1.8e-62 243.0 189 65.6
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 2.4e-62 242.7 189 65.6
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 2.4e-62 242.7 189 65.6
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 5.4e-62 241.5 189 65.6
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 5.4e-62 241.5 189 67.7
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 7.0e-62 241.1 189 65.6
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 7.0e-62 241.1 189 66.1
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 7.0e-62 241.1 189 66.7
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.6e-61 240.0 189 65.6
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 2.0e-61 239.6 188 67.6
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 2.7e-61 239.2 189 65.6
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 3.5e-61 238.8 189 65.1
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 1.0e-60 237.3 189 65.6
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.3e-60 236.9 189 66.1
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.3e-60 236.9 189 65.6
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 2.2e-60 236.1 189 66.7
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 3.8e-60 235.3 189 64.6
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 6.5e-60 234.6 189 65.1
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.9e-59 233.0 189 68.3
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.9e-59 233.0 189 68.3
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 2.5e-59 232.6 189 64.0
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 7.2e-59 231.1 220 61.4
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 1.2e-58 230.3 189 64.6
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 4.0e-57 225.3 189 61.4
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 4.0e-57 225.3 189 60.8
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 1.5e-56 223.4 189 63.5
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 2.0e-56 223.0 251 54.6
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 2.6e-56 222.6 189 63.5
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 3.4e-56 222.2 189 65.1
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 9.8e-56 220.7 189 64.0
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 2.2e-55 219.5 195 62.6
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 3.7e-55 218.8 189 61.4
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 1.8e-54 216.5 154 74.7
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 5.4e-54 214.9 189 57.1
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 9.2e-54 214.2 227 55.5
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 1.6e-53 213.4 189 58.7
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 5.9e-53 211.5 150 73.3
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 7.7e-53 211.1 189 61.4
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 7.7e-53 211.1 150 72.7
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.3e-52 210.3 227 54.6
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 2.1e-50 203.0 187 56.1
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 3.6e-50 202.2 195 59.5
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.0e-49 200.7 235 51.9
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 2.3e-49 199.5 149 70.5
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.5e-48 196.8 189 56.6
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 2.6e-48 196.1 189 56.6
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 7.5e-48 194.5 189 58.2
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 2.2e-47 193.0 152 67.8
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 3.7e-47 192.2 189 56.6
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 9.2e-46 187.6 149 64.4
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 9.2e-46 187.6 149 64.4
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 1.2e-45 187.2 197 55.3
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 2.0e-45 186.4 152 63.2
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 2.7e-45 186.0 150 65.3
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 3.0e-44 182.6 152 65.1
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 3.9e-44 182.2 150 64.7
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 2.0e-40 169.9 156 57.1
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 2.0e-37 159.8 121 69.4
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 1.3e-36 157.1 116 69.8
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.1e-33 147.5 149 57.0
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.1e-33 147.5 149 57.0
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 1.8e-33 146.7 115 66.1
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 2.3e-33 146.4 188 41.5
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.3e-31 140.6 129 56.6
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 9.2e-30 134.4 97 71.1
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 3.5e-29 132.5 120 60.0
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 9.5e-27 124.4 79 73.4
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 2.8e-26 122.9 164 41.5
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 3.6e-26 122.5 80 70.0
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 1.4e-22 110.5 64 84.4
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 5.4e-22 108.6 64 82.8
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 8.6e-20 101.3 149 45.6
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 5.8e-16 88.6 74 64.9
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 9.9e-16 87.8 49 83.7
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 1.7e-15 87.0 173 34.7
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 7.8e-13 78.2 188 30.9
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 6.2e-10 68.6 164 27.4
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 2.4e-09 66.6 55 61.8
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 1.5e-08 63.9 34 79.4
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 1.1e-06 57.8 30 83.3


User provided reference genes

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