Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028647 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.1e-120 434.1 209 100.0
CSS0043105 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.2e-80 303.5 280 60.0
CSS0044430 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D008966 4.9e-77 291.6 259 64.1
CSS0031147 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D008966 1.4e-71 273.5 243 63.0
CSS0040916 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D008966 2.3e-71 272.7 243 62.6
CSS0030166 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.3e-63 246.1 225 63.6
CSS0032089 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.2e-54 217.2 237 58.2
CSS0021221 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.7e-43 179.5 185 57.3
CSS0026530 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.7e-43 179.5 185 57.3
CSS0005205 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.1e-35 153.3 196 40.8
CSS0012263 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 7.8e-35 151.4 196 40.3
CSS0030640 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 3.4e-30 136.0 189 37.6
CSS0018151 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.8e-26 123.6 118 46.6
CSS0039812 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.1e-25 120.9 196 36.2
CSS0005720 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.5e-20 103.2 99 47.5
Rhsim08G0130100 Rhododendron simsii HOM05D000187 ORTHO05D000230 2.5e-20 103.2 167 39.5
Hma1.2p1_0561F.1_g178910 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.1e-19 100.1 258 30.2
CSS0028814 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.6e-19 99.0 110 46.4
Hma1.2p1_0104F.1_g050035 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.7e-18 94.7 180 30.6
Actinidia29263 Actinidia chinensis HOM05D000017 ORTHO05D000013 4.3e-17 92.4 160 36.9
Hma1.2p1_1264F.1_g271275 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.4e-17 91.7 200 29.5
Rhsim13G0069300 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.4e-15 87.4 195 28.2
Dinv18500 Davidia involucrata HOM05D007604 ORTHO05D008966 9.0e-15 84.7 95 41.1
Hma1.2p1_0564F.1_g179090 Hydrangea macrophylla HOM05D000747 ORTHO05D007656 1.2e-14 84.3 203 29.1
Lj2g0013559 Lotus japonicus HOM05D000017 ORTHO05D000013 4.5e-14 82.4 174 27.6
Dinv03203 Davidia involucrata HOM05D007604 ORTHO05D008966 1.0e-13 81.3 117 35.9
Rhsim08G0098700 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.8e-13 79.3 203 26.6
CSS0000907 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.4e-13 78.2 96 40.6
Rhsim06G0106500 Rhododendron simsii HOM05D007604 ORTHO05D000013 1.9e-12 77.0 99 44.4
Rhsim04G0059700 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.5e-12 76.6 188 27.7
Lj5g0026532 Lotus japonicus HOM05D000017 ORTHO05D000013 5.5e-12 75.5 204 25.0
Rhsim06G0119600 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.5e-12 75.5 235 28.1
Dinv13083 Davidia involucrata HOM05D007604 ORTHO05D008966 1.6e-11 73.9 104 34.6
Dinv24728 Davidia involucrata HOM05D000017 ORTHO05D008966 2.7e-11 73.2 119 27.7
Rhsim02G0213500 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.3e-10 70.9 117 29.9
Dinv05752 Davidia involucrata HOM05D007604 ORTHO05D008966 3.9e-10 69.3 150 28.7
Lj3g0025866 Lotus japonicus HOM05D000017 ORTHO05D000013 1.1e-09 67.8 120 29.2
Hma1.2p1_0327F.1_g126370 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.3e-09 65.9 88 35.2
Rhsim06G0100900 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.3e-09 65.9 77 42.9
Cc06_g15030 Coffea canephora HOM05D000017 ORTHO05D000013 5.7e-09 65.5 117 31.6
TWI14G1428 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.7e-09 65.5 180 26.7
TWI53G0734 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.7e-09 65.5 180 26.7
Hma1.2p1_0157F.1_g068990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.4e-09 65.1 238 23.9
Atru.chr8.1311 Acer truncatum HOM05D000017 ORTHO05D000013 3.7e-08 62.8 116 28.4
Atru.chr3.2457 Acer truncatum HOM05D000017 ORTHO05D000013 4.8e-08 62.4 179 21.8
Hma1.2p1_2038F.1_g312050 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.8e-08 62.4 238 23.5
Atru.chr10.1873 Acer truncatum HOM05D000017 ORTHO05D000013 1.1e-07 61.2 205 26.3
Atru.chr11.1920 Acer truncatum HOM05D000017 ORTHO05D000013 3.1e-07 59.7 179 21.2
Atru.chr3.730 Acer truncatum HOM05D000017 ORTHO05D000013 3.1e-07 59.7 242 24.8
Rhsim13G0068100 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.1e-07 59.7 228 21.5
Atru.chr12.1107 Acer truncatum HOM05D000017 ORTHO05D000013 4.1e-07 59.3 107 29.0
Prupe.7G029200 Prunus persica HOM05D000017 ORTHO05D000013 6.9e-07 58.5 48 50.0
Atru.chr13.2307 Acer truncatum HOM05D000017 ORTHO05D000013 9.0e-07 58.2 128 29.7
Ciclev10006748m.g Citrus clementina HOM05D000017 ORTHO05D000013 1.2e-06 57.8 186 22.0
Atru.chr5.2680 Acer truncatum HOM05D000017 ORTHO05D000013 1.5e-06 57.4 107 29.0
Hma1.2p1_0185F.1_g081470 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.5e-06 57.4 122 25.4
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.4e-06 56.2 122 24.6
Hma1.2p1_1228F.1_g268660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.4e-06 56.2 122 24.6
Hma1.2p1_2618F.1_g325525 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.4e-06 56.2 122 24.6
Hma1.2p1_0049F.1_g028220 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.5e-06 55.8 68 41.2
Ca_19093_v3 Cicer arietinum L. HOM05D008026 ORTHO05D011894 7.7e-06 55.1 112 27.7
CANSAT35G0616 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-05 54.7 72 34.7
Ca_13798_v3 Cicer arietinum L. HOM05D000017 ORTHO05D011894 1.0e-05 54.7 144 26.4


User provided reference genes

Program Settings