Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 5.1e-95 351.3 208 100.0
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.3e-93 346.7 209 99.5
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 1.2e-62 243.8 208 70.7
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.7e-61 240.0 204 69.1
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 1.1e-60 237.3 207 67.1
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.1e-60 237.3 204 69.6
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 1.0e-58 230.7 212 66.5
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 1.7e-58 229.9 208 64.9
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 1.7e-58 229.9 202 67.8
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 1.7e-58 229.9 209 65.1
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 8.6e-58 227.6 208 66.3
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 1.1e-57 227.3 175 72.0
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 3.3e-57 225.7 213 65.7
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 3.3e-57 225.7 213 65.7
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 7.3e-57 224.6 226 67.3
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 9.5e-57 224.2 207 69.6
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 2.8e-56 222.6 194 68.6
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 4.0e-55 218.8 207 68.1
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 8.9e-55 217.6 174 67.8
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 3.4e-54 215.7 227 58.6
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 3.4e-54 215.7 209 66.5
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 4.4e-54 215.3 213 59.6
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 4.4e-54 215.3 219 64.4
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 7.5e-54 214.5 217 65.0
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 9.8e-54 214.2 212 62.7
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 1.7e-53 213.4 232 64.7
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 2.2e-53 213.0 224 63.8
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 2.2e-53 213.0 187 66.8
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 3.2e-52 209.1 207 61.4
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 4.1e-52 208.8 183 65.0
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 9.2e-52 207.6 176 65.9
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 9.2e-52 207.6 224 63.4
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 1.6e-51 206.8 216 59.7
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 2.0e-51 206.5 204 59.3
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 3.5e-51 205.7 195 61.5
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 3.5e-51 205.7 182 63.7
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 3.5e-51 205.7 212 55.7
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 3.5e-51 205.7 185 67.0
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 4.6e-51 205.3 165 64.2
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 1.0e-50 204.1 207 61.8
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 2.3e-50 203.0 213 57.7
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 2.3e-50 203.0 208 58.2
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 3.9e-50 202.2 202 62.9
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 3.9e-50 202.2 211 67.8
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 6.6e-50 201.4 204 59.3
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 6.6e-50 201.4 217 59.4
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 8.6e-50 201.1 209 60.8
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 1.5e-49 200.3 207 58.0
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 3.3e-49 199.1 209 65.1
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 4.3e-49 198.7 167 65.3
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 5.6e-49 198.4 176 65.9
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 9.5e-49 197.6 214 64.5
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 9.5e-49 197.6 203 57.1
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 2.1e-48 196.4 164 68.9
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 2.8e-48 196.1 163 65.6
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 2.8e-48 196.1 174 69.5
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 2.8e-48 196.1 202 55.4
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 2.8e-48 196.1 211 62.1
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 6.2e-48 194.9 184 60.3
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 8.0e-48 194.5 207 56.5
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 1.8e-47 193.4 209 67.0
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 5.2e-47 191.8 176 63.1
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 5.2e-47 191.8 226 58.4
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 8.9e-47 191.0 218 64.2
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 8.9e-47 191.0 208 52.9
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 1.2e-46 190.7 176 70.5
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 2.0e-46 189.9 205 54.1
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 4.4e-46 188.7 118 78.8
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 2.2e-45 186.4 197 61.4
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 3.7e-45 185.7 218 58.3
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 4.9e-45 185.3 176 69.9
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 6.4e-45 184.9 182 68.1
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 8.3e-45 184.5 214 60.3
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 1.1e-44 184.1 215 63.3
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 1.1e-44 184.1 176 70.5
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.4e-44 183.7 178 59.0
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 3.2e-44 182.6 213 65.3
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 4.1e-44 182.2 208 55.8
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 4.1e-44 182.2 175 61.7
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 4.1e-44 182.2 219 59.4
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 7.0e-44 181.4 112 79.5
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 1.2e-43 180.6 216 61.1
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 1.6e-43 180.3 206 53.4
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 1.3e-42 177.2 169 61.5
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 8.6e-42 174.5 208 52.4
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 1.1e-41 174.1 116 75.0
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 1.9e-41 173.3 160 73.1
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 5.6e-41 171.8 169 59.2
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 5.6e-41 171.8 169 59.2
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 5.6e-41 171.8 110 78.2
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 7.3e-41 171.4 207 54.6
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 1.6e-40 170.2 211 51.7
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 1.6e-40 170.2 211 51.7
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 2.1e-40 169.9 169 58.6
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 3.6e-40 169.1 234 53.0
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 3.6e-40 169.1 164 61.0
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 8.1e-40 167.9 209 49.3
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 1.1e-39 167.5 114 73.7
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 2.3e-39 166.4 196 54.1
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 3.1e-39 166.0 107 72.0
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 4.0e-39 165.6 158 59.5
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 3.4e-38 162.5 220 57.3
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.3e-37 160.6 230 46.1
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 2.2e-37 159.8 105 78.1
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 9.5e-33 144.4 118 64.4
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 2.8e-32 142.9 119 66.4
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 4.4e-30 135.6 87 78.2
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 1.2e-27 127.5 115 53.0
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 4.7e-24 115.5 108 53.7
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 4.7e-24 115.5 110 53.6
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 1.2e-22 110.9 101 51.5
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 6.4e-21 105.1 152 48.7
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 1.9e-17 93.6 169 53.3
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 4.3e-17 92.4 143 50.3
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 1.3e-13 80.9 72 54.2
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 6.4e-13 78.6 147 49.7
THA.LOC104815380 Tarenaya hassleriana HOM05D006993 ORTHO05D008336 1.8e-07 60.5 158 48.1
Ca_23582_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 1.5e-06 57.4 38 71.1
Hund02819 Selenicereus undatus HOM05D000190 ORTHO05D000113 9.9e-06 54.7 105 55.2


User provided reference genes

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