Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 2.7e-108 395.2 184 100.0
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 6.1e-92 340.9 159 100.0
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 2.3e-83 312.4 223 68.2
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 6.8e-83 310.8 223 66.8
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 9.5e-77 290.4 160 81.9
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 2.3e-75 285.8 159 83.0
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 5.2e-75 284.6 160 81.2
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 7.8e-71 270.8 219 61.2
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 3.0e-70 268.9 233 56.7
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 8.6e-70 267.3 221 59.7
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 3.3e-69 265.4 223 57.8
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.2e-68 263.5 215 59.1
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.2e-68 263.5 215 59.1
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 2.1e-68 262.7 224 58.0
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 2.1e-68 262.7 219 58.9
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 3.6e-68 261.9 213 59.6
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 3.6e-68 261.9 217 59.9
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 3.6e-68 261.9 225 56.4
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 4.7e-68 261.5 191 64.9
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 4.7e-68 261.5 191 64.9
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 6.2e-68 261.2 222 59.5
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 1.4e-67 260.0 267 49.8
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 3.1e-67 258.8 224 58.5
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 5.2e-67 258.1 224 58.5
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 6.8e-67 257.7 159 76.1
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 8.9e-67 257.3 223 57.0
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 8.9e-67 257.3 217 57.1
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 1.5e-66 256.5 210 59.5
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 2.0e-66 256.1 223 57.0
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 4.4e-66 255.0 223 57.0
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 7.6e-66 254.2 214 55.6
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 9.9e-66 253.8 228 57.0
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 1.3e-65 253.4 219 56.2
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 1.3e-65 253.4 160 72.5
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 1.3e-65 253.4 220 58.2
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 1.7e-65 253.1 202 61.4
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 3.8e-65 251.9 225 56.9
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 6.4e-65 251.1 225 56.4
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 1.2e-63 246.9 157 72.0
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 1.2e-63 246.9 160 71.2
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 1.6e-63 246.5 162 71.6
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.7e-63 245.7 157 72.0
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 4.6e-63 245.0 221 55.7
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 4.6e-63 245.0 164 67.7
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 1.3e-62 243.4 160 68.8
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.3e-62 242.7 157 70.7
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 1.5e-61 240.0 224 55.4
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 1.9e-61 239.6 230 55.7
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 2.5e-61 239.2 219 55.7
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 2.5e-61 239.2 160 68.8
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 2.5e-61 239.2 225 55.1
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 3.3e-61 238.8 221 54.8
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 3.3e-61 238.8 162 69.8
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 4.3e-61 238.4 218 53.7
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 5.6e-61 238.0 219 55.3
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 1.3e-60 236.9 162 68.5
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 2.1e-60 236.1 162 70.4
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 2.8e-60 235.7 157 68.2
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 2.8e-60 235.7 159 71.1
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 3.6e-60 235.3 219 54.3
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 3.6e-60 235.3 219 54.8
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 3.6e-60 235.3 219 54.8
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 6.2e-60 234.6 224 52.7
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 6.2e-60 234.6 222 53.6
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 8.1e-60 234.2 219 53.0
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 8.1e-60 234.2 162 67.9
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 5.3e-59 231.5 215 54.4
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 5.3e-59 231.5 226 52.2
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 9.0e-59 230.7 164 67.7
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 1.5e-58 229.9 226 51.3
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 2.6e-58 229.2 162 66.0
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 5.8e-58 228.0 215 52.1
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 5.8e-58 228.0 240 50.8
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 7.6e-58 227.6 161 66.5
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 1.3e-57 226.9 217 52.1
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 1.3e-57 226.9 217 52.1
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 2.2e-57 226.1 159 66.0
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 3.8e-57 225.3 157 66.9
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 1.1e-56 223.8 226 50.4
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 1.4e-56 223.4 164 67.1
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 4.2e-56 221.9 164 63.4
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 7.1e-56 221.1 164 64.6
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 2.1e-55 219.5 219 49.3
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 2.1e-55 219.5 165 62.4
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 2.7e-55 219.2 160 66.2
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 3.5e-55 218.8 160 66.2
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 6.0e-55 218.0 157 63.7
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 1.7e-54 216.5 163 64.4
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 1.7e-54 216.5 163 64.4
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 3.9e-54 215.3 161 66.5
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 5.1e-54 214.9 220 49.1
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 6.6e-54 214.5 160 63.8
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 1.1e-53 213.8 157 63.7
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 1.1e-53 213.8 133 69.9
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 1.5e-53 213.4 225 48.0
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 2.5e-53 212.6 159 63.5
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 4.3e-53 211.8 156 62.8
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 4.3e-53 211.8 160 65.0
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 5.6e-53 211.5 158 62.0
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 5.6e-53 211.5 142 69.0
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 7.3e-53 211.1 159 61.6
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 1.3e-52 210.3 160 60.0
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 3.6e-52 208.8 158 60.1
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 4.8e-52 208.4 158 61.4
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 6.2e-52 208.0 158 62.7
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 1.5e-50 203.4 157 60.5
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 1.5e-50 203.4 222 48.2
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 4.5e-50 201.8 160 62.5
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 9.9e-50 200.7 201 53.2
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 2.2e-49 199.5 217 45.6
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 4.3e-45 185.3 164 55.5
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 5.5e-40 168.3 156 53.8
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 7.9e-39 164.5 162 50.6
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 2.5e-37 159.5 82 79.3
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 7.6e-34 147.9 81 71.6
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 1.8e-30 136.7 165 41.8
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 3.6e-07 59.3 61 37.7
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 1.0e-06 57.8 165 32.1


User provided reference genes

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