Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028600 Camellia sinensis var. sinensis HOM05D002156 ORTHO05D112121 1.1e-85 319.7 143 100.0
CSS0028846 Camellia sinensis var. sinensis HOM05D002156 ORTHO05D002328 3.0e-09 65.9 38 76.3
Dinv26941 Davidia involucrata HOM05D002156 ORTHO05D002328 3.0e-09 65.9 28 96.4
vmacro05417 Vaccinium macrocarpon HOM05D002156 ORTHO05D002328 1.1e-08 63.9 28 92.9
Psat2g171800 Pisum sativum HOM05D002156 ORTHO05D002328 1.9e-08 63.2 28 89.3
Actinidia34534 Actinidia chinensis HOM05D002156 ORTHO05D002328 2.5e-08 62.8 28 92.9
Medtr5g015280 Medicago truncatula HOM05D002156 ORTHO05D002328 2.5e-08 62.8 28 89.3
TAR381G0066 Trochodendron aralioides HOM05D002156 ORTHO05D002328 3.3e-08 62.4 28 85.7
ECA234G4580 Erigeron canadensis HOM05D002156 ORTHO05D002328 5.6e-08 61.6 28 89.3
TPR.G9332 Trifolium pratense HOM05D002156 ORTHO05D002328 5.6e-08 61.6 28 89.3
arahy.Tifrunner.gnm1.ann1.DXU8TV Arachis hypogaea HOM05D002156 ORTHO05D002328 1.6e-07 60.1 28 85.7
arahy.Tifrunner.gnm1.ann1.WVVG4E Arachis hypogaea HOM05D002156 ORTHO05D002328 1.6e-07 60.1 28 85.7
Rhsim10G0099000 Rhododendron simsii HOM05D002156 ORTHO05D002328 1.6e-07 60.1 28 89.3
Sc07g0000520 Simmondsia chinensis HOM05D002156 ORTHO05D002328 1.6e-07 60.1 28 85.7
Ca_24680_v3 Cicer arietinum L. HOM05D002156 ORTHO05D002328 2.1e-07 59.7 28 82.1
Dinv04039 Davidia involucrata HOM05D002156 ORTHO05D002328 2.1e-07 59.7 28 82.1
Oeu013327.1 Olea europaea HOM05D002156 ORTHO05D002328 2.1e-07 59.7 28 85.7
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 2.8e-07 59.3 28 82.1
HanXRQChr10g0293211 Helianthus annuus HOM05D002156 ORTHO05D002328 2.8e-07 59.3 28 85.7
Nn5g30618 Nelumbo nucifera HOM05D002156 ORTHO05D002328 2.8e-07 59.3 28 85.7
Glyma.01G194800 Glycine max HOM05D002156 ORTHO05D002328 3.6e-07 58.9 28 78.6
MELO3C023952.2 Cucumis melo HOM05D002156 ORTHO05D002328 8.1e-07 57.8 28 82.1
Manes.12G115600 Manihot esculenta HOM05D002156 ORTHO05D002328 8.1e-07 57.8 28 78.6
CAN.G775.6 Capsicum annuum HOM05D002156 ORTHO05D002328 1.4e-06 57.0 28 78.6
Lj2g0015820 Lotus japonicus HOM05D002156 ORTHO05D002328 1.4e-06 57.0 28 78.6
Lalb_Chr05g0213751 Lupinus albus HOM05D002156 ORTHO05D002328 1.4e-06 57.0 28 78.6
THA.LOC104821209 Tarenaya hassleriana HOM05D002156 ORTHO05D002328 1.8e-06 56.6 28 75.0
CANSAT80G2770 Cannabis sativa HOM05D002156 ORTHO05D002328 3.1e-06 55.8 28 75.0
Haze_15273 Corylus avellana HOM05D002156 ORTHO05D002328 3.1e-06 55.8 28 75.0
Eucgr.H02313 Eucalyptus grandis HOM05D002156 ORTHO05D002328 3.1e-06 55.8 28 78.6
Lsat_1_v5_gn_5_106741 Lactuca sativa HOM05D002156 ORTHO05D002328 3.1e-06 55.8 28 75.0
Phvul.002G010100 Phaseolus vulgaris HOM05D002156 ORTHO05D002328 3.1e-06 55.8 38 57.9
COL.COLO4_11588 Corchorus olitorius HOM05D002156 ORTHO05D002328 4.0e-06 55.5 28 75.0
CsaV3_3G032380 Cucumis sativus L. HOM05D002156 ORTHO05D002328 4.0e-06 55.5 28 78.6
Duzib264G1314 Durio zibethinus HOM05D002156 ORTHO05D002328 4.0e-06 55.5 28 78.6
Gohir.A12G077600 Gossypium hirsutum HOM05D002156 ORTHO05D002328 4.0e-06 55.5 28 75.0
Aa31LG1G16160 Aethionema arabicum HOM05D002156 ORTHO05D002328 5.2e-06 55.1 28 71.4
PGSC0003DMG400003330 Solanum tuberosum HOM05D002156 ORTHO05D002328 5.2e-06 55.1 28 75.0
CiPaw.02G001800 Carya illinoinensis HOM05D002156 ORTHO05D002328 6.8e-06 54.7 28 75.0
Nitab4.5_0000036g0110 Nicotiana tabacum HOM05D002156 ORTHO05D002328 6.8e-06 54.7 28 78.6
Nitab4.5_0008452g0010 Nicotiana tabacum HOM05D002156 ORTHO05D002328 6.8e-06 54.7 28 78.6
Atru.chr3.1024 Acer truncatum HOM05D002156 ORTHO05D002328 8.9e-06 54.3 28 71.4
Solyc02g064580.3 Solanum lycopersicum HOM05D002156 ORTHO05D002328 8.9e-06 54.3 28 71.4


User provided reference genes

Program Settings